RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 ZNF726A6NNF4 738 aa2.91□□□□□ -1.94
PRPF39-209ENST00000556353 E9PLD3 99 aa2.91□□□□□ -1.94
PRPF39-209ENST00000556353 LYNX1G3V0Z9 82 aa2.91□□□□□ -1.94
PRPF39-209ENST00000556353 PLXNB1O43157 2135 aa2.91□□□□□ -1.94
PRPF39-209ENST00000556353 SOX15O60248 233 aa2.91□□□□□ -1.94
PRPF39-209ENST00000556353 FKBP6O75344 327 aa2.91□□□□□ -1.94
PRPF39-209ENST00000556353 MRPL33O75394 65 aaKnown RBP2.91□□□□□ -1.94
PRPF39-209ENST00000556353 LALBAP00709 142 aa2.91□□□□□ -1.94
PRPF39-209ENST00000556353 CA1P00915 261 aaPredicted RBP2.91□□□□□ -1.94
PRPF39-209ENST00000556353 MRPL3P09001 348 aaKnown RBP2.91□□□□□ -1.94
PRPF39-209ENST00000556353 OR5G3P0C626 314 aa2.91□□□□□ -1.94
PRPF39-209ENST00000556353 CT45A6P0DMU7 189 aa2.91□□□□□ -1.94
PRPF39-209ENST00000556353 CT45A5P0DMU8 189 aa2.91□□□□□ -1.94
PRPF39-209ENST00000556353 CT45A7P0DMV0 189 aa2.91□□□□□ -1.94
PRPF39-209ENST00000556353 LYNX1P0DP58 116 aa2.91□□□□□ -1.94
PRPF39-209ENST00000556353 SLC25A16P16260 332 aa2.91□□□□□ -1.94
PRPF39-209ENST00000556353 ORM2P19652 201 aa2.91□□□□□ -1.94
PRPF39-209ENST00000556353 FABP6P51161 128 aa2.91□□□□□ -1.94
PRPF39-209ENST00000556353 POLR2HP52434 150 aaKnown RBP2.91□□□□□ -1.94
PRPF39-209ENST00000556353 EFNA4P52798 201 aa2.91□□□□□ -1.94
PRPF39-209ENST00000556353 DLX1P56177 255 aa2.91□□□□□ -1.94
PRPF39-209ENST00000556353 DEFA1P59665 94 aa2.91□□□□□ -1.94
PRPF39-209ENST00000556353 DEFA3P59666 94 aa2.91□□□□□ -1.94
PRPF39-209ENST00000556353 NCS1P62166 190 aa2.91□□□□□ -1.94
PRPF39-209ENST00000556353 SLC35A1P78382 337 aa2.91□□□□□ -1.94
PRPF39-209ENST00000556353 TNFAIP6P98066 277 aaPredicted RBP2.91□□□□□ -1.94
PRPF39-209ENST00000556353 PSG9Q00887 426 aa2.91□□□□□ -1.94
PRPF39-209ENST00000556353 PPP1R1AQ13522 171 aa2.91□□□□□ -1.94
PRPF39-209ENST00000556353 GGTLC2Q14390 218 aa2.91□□□□□ -1.94
PRPF39-209ENST00000556353 OR7A5Q15622 319 aa2.91□□□□□ -1.94
PRPF39-209ENST00000556353 NRF1Q16656 503 aa2.91□□□□□ -1.94
PRPF39-209ENST00000556353 FAM74A3Q4VXF1 159 aa2.91□□□□□ -1.94
PRPF39-209ENST00000556353 CT45A1Q5HYN5 189 aa2.91□□□□□ -1.94
PRPF39-209ENST00000556353 TPTE2P1Q5T6R2 138 aa2.91□□□□□ -1.94
PRPF39-209ENST00000556353 C1orf195Q5TG92 126 aa2.91□□□□□ -1.94
PRPF39-209ENST00000556353 EIF5AL1Q6IS14 154 aaKnown RBP2.91□□□□□ -1.94
PRPF39-209ENST00000556353 RASSF6Q6ZTQ3 369 aa2.91□□□□□ -1.94
PRPF39-209ENST00000556353 FAM231DQ6ZW35 169 aa2.91□□□□□ -1.94
PRPF39-209ENST00000556353 ARPINQ7Z6K5 226 aa2.91□□□□□ -1.94
PRPF39-209ENST00000556353 LRP11Q86VZ4 500 aa2.91□□□□□ -1.94
PRPF39-209ENST00000556353 VKORC1L1Q8N0U8 176 aa2.91□□□□□ -1.94
PRPF39-209ENST00000556353 SVBPQ8N300 66 aa2.91□□□□□ -1.94
PRPF39-209ENST00000556353 FAM24BQ8N5W8 94 aa2.91□□□□□ -1.94
PRPF39-209ENST00000556353 OR8G5Q8NG78 346 aa2.91□□□□□ -1.94
PRPF39-209ENST00000556353 CT45A3Q8NHU0 189 aa2.91□□□□□ -1.94
PRPF39-209ENST00000556353 ZNF563Q8TA94 476 aa2.91□□□□□ -1.94
PRPF39-209ENST00000556353 DCUN1D4Q92564 292 aa2.91□□□□□ -1.94
PRPF39-209ENST00000556353 OR52B2Q96RD2 323 aa2.91□□□□□ -1.94
PRPF39-209ENST00000556353 MGLLQ99685 303 aa2.91□□□□□ -1.94
PRPF39-209ENST00000556353 PDCD1LG2Q9BQ51 273 aa2.91□□□□□ -1.94
PRPF39-209ENST00000556353 NDFIP1Q9BT67 221 aa2.91□□□□□ -1.94
PRPF39-209ENST00000556353 METTL17Q9H7H0 456 aaPredicted RBP2.91□□□□□ -1.94
PRPF39-209ENST00000556353 VSIRQ9H7M9 311 aa2.91□□□□□ -1.94
PRPF39-209ENST00000556353 TUBA4BQ9H853 241 aa2.91□□□□□ -1.94
PRPF39-209ENST00000556353 CA10Q9NS85 328 aa2.91□□□□□ -1.94
PRPF39-209ENST00000556353 UQCC1Q9NVA1 299 aa2.91□□□□□ -1.94
PRPF39-209ENST00000556353 PRNDQ9UKY0 176 aa2.91□□□□□ -1.94
PRPF39-209ENST00000556353 ZNF443Q9Y2A4 671 aaPredicted RBP2.91□□□□□ -1.94
PRPF39-209ENST00000556353 LAMTOR2Q9Y2Q5 125 aa2.91□□□□□ -1.94
PRPF39-209ENST00000556353 TENM2Q9NT68 2774 aa2.9□□□□□ -1.94
PRPF39-209ENST00000556353 RYR2Q92736 4967 aa2.9□□□□□ -1.94
PRPF39-209ENST00000556353 STARD9Q9P2P6 4700 aa2.9□□□□□ -1.94
PRPF39-209ENST00000556353 GABRPO00591 440 aa2.9□□□□□ -1.95
PRPF39-209ENST00000556353 RGS16O15492 202 aaPredicted RBP2.9□□□□□ -1.95
PRPF39-209ENST00000556353 DHRS3O75911 302 aa2.9□□□□□ -1.95
PRPF39-209ENST00000556353 CDRT1O95170 752 aa2.9□□□□□ -1.95
PRPF39-209ENST00000556353 OXTP01178 125 aa2.9□□□□□ -1.95
PRPF39-209ENST00000556353 TTRP02766 147 aa2.9□□□□□ -1.95
PRPF39-209ENST00000556353 MT-ND4LP03901 98 aa2.9□□□□□ -1.95
PRPF39-209ENST00000556353 OR4A8P0C604 315 aa2.9□□□□□ -1.95
PRPF39-209ENST00000556353 ATP6V0CP27449 155 aa2.9□□□□□ -1.95
PRPF39-209ENST00000556353 SRIP30626 198 aa2.9□□□□□ -1.95
PRPF39-209ENST00000556353 GNG4P50150 75 aa2.9□□□□□ -1.95
PRPF39-209ENST00000556353 TAS2R20P59543 309 aa2.9□□□□□ -1.95
PRPF39-209ENST00000556353 JOSD1Q15040 202 aaPredicted RBP2.9□□□□□ -1.95
PRPF39-209ENST00000556353 RGNQ15493 299 aa2.9□□□□□ -1.95
PRPF39-209ENST00000556353 C1orf140Q5VVS0 124 aa2.9□□□□□ -1.95
PRPF39-209ENST00000556353 RPL22L1Q6P5R6 122 aaKnown RBP2.9□□□□□ -1.95
PRPF39-209ENST00000556353 IZUMO2Q6UXV1 221 aa2.9□□□□□ -1.95
PRPF39-209ENST00000556353 AAED1Q7RTV5 226 aa2.9□□□□□ -1.95
PRPF39-209ENST00000556353 MDP1Q86V88 176 aa2.9□□□□□ -1.95
PRPF39-209ENST00000556353 OR52E2Q8NGJ4 325 aa2.9□□□□□ -1.95
PRPF39-209ENST00000556353 OR2G2Q8NGZ5 317 aa2.9□□□□□ -1.95
PRPF39-209ENST00000556353 THEM6Q8WUY1 208 aa2.9□□□□□ -1.95
PRPF39-209ENST00000556353 TMEM158Q8WZ71 300 aa2.9□□□□□ -1.95
PRPF39-209ENST00000556353 GPR146Q96CH1 333 aa2.9□□□□□ -1.95
PRPF39-209ENST00000556353 MUCL1Q96DR8 90 aa2.9□□□□□ -1.95
PRPF39-209ENST00000556353 TMEM70Q9BUB7 260 aa2.9□□□□□ -1.95
PRPF39-209ENST00000556353 PBDC1Q9BVG4 233 aa2.9□□□□□ -1.95
PRPF39-209ENST00000556353 ZNF471Q9BX82 626 aaPredicted RBP2.9□□□□□ -1.95
PRPF39-209ENST00000556353 SAMD10Q9BYL1 202 aa2.9□□□□□ -1.95
PRPF39-209ENST00000556353 DPY30Q9C005 99 aa2.9□□□□□ -1.95
PRPF39-209ENST00000556353 TNFSF18Q9UNG2 199 aa2.9□□□□□ -1.95
PRPF39-209ENST00000556353 POLR1DQ9Y2S0 133 aa2.9□□□□□ -1.95
PRPF39-209ENST00000556353 DNAH1Q9P2D7 4330 aa2.89□□□□□ -1.95
PRPF39-209ENST00000556353 A0A087WXM4 84 aa2.89□□□□□ -1.95
PRPF39-209ENST00000556353 A0A1B0GWA3 101 aa2.89□□□□□ -1.95
PRPF39-209ENST00000556353 FABP5P3A8MUU1 101 aa2.89□□□□□ -1.95
PRPF39-209ENST00000556353 INMT-MINDY4F8WBC2 141 aa2.89□□□□□ -1.95
PRPF39-209ENST00000556353 J3QR89 54 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms