RNA–Protein interactions for RNA: ENST00000556170.5

NEK9-209, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 3,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-209ENST00000556170 DDB2Q92466 427 aa12□□□□□ -0.49
NEK9-209ENST00000556170 HIVEP3Q5T1R4 2406 aa12□□□□□ -0.49
NEK9-209ENST00000556170 FBLL1A6NHQ2 334 aaKnown RBP12□□□□□ -0.49
NEK9-209ENST00000556170 K7ENP7 123 aa12□□□□□ -0.49
NEK9-209ENST00000556170 C1orf194Q5T5A4 169 aa12□□□□□ -0.49
NEK9-209ENST00000556170 OR5AN1Q8NGI8 311 aa12□□□□□ -0.49
NEK9-209ENST00000556170 FNDC4Q9H6D8 234 aaPredicted RBP12□□□□□ -0.49
NEK9-209ENST00000556170 GGTLC3B5MD39 225 aa11.99□□□□□ -0.49
NEK9-209ENST00000556170 CORTO00230 105 aa11.99□□□□□ -0.49
NEK9-209ENST00000556170 TEX36Q5VZQ5 186 aa11.99□□□□□ -0.49
NEK9-209ENST00000556170 BPIFA4PQ86YQ2 179 aa11.99□□□□□ -0.49
NEK9-209ENST00000556170 NDUFA4L2Q9NRX3 87 aa11.99□□□□□ -0.49
NEK9-209ENST00000556170 HIF1ANQ9NWT6 349 aa11.99□□□□□ -0.49
NEK9-209ENST00000556170 IGKV1OR2-108A0A075B7D4 117 aa11.99□□□□□ -0.49
NEK9-209ENST00000556170 A0A1W2PRE2 83 aa11.99□□□□□ -0.49
NEK9-209ENST00000556170 ITGB1BP1O14713 200 aa11.99□□□□□ -0.49
NEK9-209ENST00000556170 CIDEAO60543 219 aa11.99□□□□□ -0.49
NEK9-209ENST00000556170 CLEC2AQ6UVW9 174 aa11.99□□□□□ -0.49
NEK9-209ENST00000556170 SELENOKQ9Y6D0 94 aa11.99□□□□□ -0.49
NEK9-209ENST00000556170 AMY1AP04745 511 aa11.99□□□□□ -0.49
NEK9-209ENST00000556170 SETD2Q9BYW2 2564 aaPredicted RBP11.98□□□□□ -0.49
NEK9-209ENST00000556170 IGHV3-66A0A0C4DH42 116 aa11.98□□□□□ -0.49
NEK9-209ENST00000556170 HIGD1CA8MV81 97 aa11.98□□□□□ -0.49
NEK9-209ENST00000556170 A8MWL6 223 aa11.98□□□□□ -0.49
NEK9-209ENST00000556170 VWC2Q2TAL6 325 aa11.98□□□□□ -0.49
NEK9-209ENST00000556170 TMEM155Q4W5P6 130 aa11.98□□□□□ -0.49
NEK9-209ENST00000556170 MORN5Q5VZ52 161 aa11.98□□□□□ -0.49
NEK9-209ENST00000556170 UNQ5815/PRO19632Q6UWF5 114 aa11.98□□□□□ -0.49
NEK9-209ENST00000556170 LAMTOR2Q9Y2Q5 125 aa11.98□□□□□ -0.49
NEK9-209ENST00000556170 PSG1P11464 419 aa11.98□□□□□ -0.49
NEK9-209ENST00000556170 FOXL1Q12952 345 aa11.98□□□□□ -0.49
NEK9-209ENST00000556170 EXOC3-AS1Q8N2X6 119 aa11.98□□□□□ -0.49
NEK9-209ENST00000556170 HLA-DQA1P01909 254 aa11.98□□□□□ -0.49
NEK9-209ENST00000556170 ZNF833PQ6ZTB9 187 aa11.98□□□□□ -0.49
NEK9-209ENST00000556170 Q8NA96 180 aa11.98□□□□□ -0.49
NEK9-209ENST00000556170 NUDT10Q8NFP7 164 aa11.98□□□□□ -0.49
NEK9-209ENST00000556170 OR4A5Q8NH83 315 aa11.98□□□□□ -0.49
NEK9-209ENST00000556170 SIGLEC9Q9Y336 463 aa11.98□□□□□ -0.49
NEK9-209ENST00000556170 LSM4Q9Y4Z0 139 aaKnown RBP11.98□□□□□ -0.49
NEK9-209ENST00000556170 MAP1AP78559 2803 aaPredicted RBP11.98□□□□□ -0.49
NEK9-209ENST00000556170 TCTAP57738 103 aa11.97□□□□□ -0.49
NEK9-209ENST00000556170 PAFAH1B2P68402 229 aa11.97□□□□□ -0.49
NEK9-209ENST00000556170 Q9H3A6 140 aa11.97□□□□□ -0.49
NEK9-209ENST00000556170 MT-ND6P03923 174 aa11.97□□□□□ -0.49
NEK9-209ENST00000556170 EIF4EBP1Q13541 118 aaPredicted RBP11.97□□□□□ -0.49
NEK9-209ENST00000556170 PRR20EP86478 221 aa11.97□□□□□ -0.49
NEK9-209ENST00000556170 PRR20CP86479 221 aa11.97□□□□□ -0.49
NEK9-209ENST00000556170 PRR20DP86480 221 aa11.97□□□□□ -0.49
NEK9-209ENST00000556170 PRR20BP86481 221 aa11.97□□□□□ -0.49
NEK9-209ENST00000556170 PRR20AP86496 221 aa11.97□□□□□ -0.49
NEK9-209ENST00000556170 FBLN7Q53RD9 439 aa11.97□□□□□ -0.49
NEK9-209ENST00000556170 ACTL10Q5JWF8 245 aa11.97□□□□□ -0.49
NEK9-209ENST00000556170 IFITM10A6NMD0 228 aa11.96□□□□□ -0.49
NEK9-209ENST00000556170 BUB1B-PAK6H3BSN5 160 aa11.96□□□□□ -0.49
NEK9-209ENST00000556170 GBGT1Q8N5D6 347 aa11.96□□□□□ -0.49
NEK9-209ENST00000556170 TBL2Q9Y4P3 447 aaKnown RBP11.96□□□□□ -0.49
NEK9-209ENST00000556170 SHISA9B4DS77 424 aa11.96□□□□□ -0.49
NEK9-209ENST00000556170 ZNF207O43670 478 aaKnown RBP11.96□□□□□ -0.49
NEK9-209ENST00000556170 CGB3P0DN86 165 aa11.96□□□□□ -0.49
NEK9-209ENST00000556170 CGB7P0DN87 165 aa11.96□□□□□ -0.49
NEK9-209ENST00000556170 TEX45Q8NA69 505 aa11.96□□□□□ -0.49
NEK9-209ENST00000556170 PRSS3P2Q8NHM4 247 aa11.96□□□□□ -0.49
NEK9-209ENST00000556170 SMIM12Q96EX1 92 aa11.96□□□□□ -0.49
NEK9-209ENST00000556170 EPDR1Q9UM22 224 aa11.96□□□□□ -0.49
NEK9-209ENST00000556170 USP9XQ93008 2570 aaPredicted RBP11.96□□□□□ -0.49
NEK9-209ENST00000556170 KMT2EQ8IZD2 1858 aa11.95□□□□□ -0.5
NEK9-209ENST00000556170 NDUFS7O75251 213 aa11.95□□□□□ -0.5
NEK9-209ENST00000556170 ORM1P02763 201 aa11.95□□□□□ -0.5
NEK9-209ENST00000556170 CLEC3BP05452 202 aa11.95□□□□□ -0.5
NEK9-209ENST00000556170 MAS1LP35410 378 aa11.95□□□□□ -0.5
NEK9-209ENST00000556170 CCDC144NLQ6NUI1 221 aa11.95□□□□□ -0.5
NEK9-209ENST00000556170 LOC389332A0A1B0GUA5 103 aa11.95□□□□□ -0.5
NEK9-209ENST00000556170 FRMD6-AS1P0C7T7 363 aa11.95□□□□□ -0.5
NEK9-209ENST00000556170 DNLZQ5SXM8 178 aa11.95□□□□□ -0.5
NEK9-209ENST00000556170 CLEC5AQ9NY25 188 aa11.95□□□□□ -0.5
NEK9-209ENST00000556170 AKAP13Q12802 2813 aa11.95□□□□□ -0.5
NEK9-209ENST00000556170 SH2D7A6NKC9 451 aaPredicted RBP11.95□□□□□ -0.5
NEK9-209ENST00000556170 K7EN84 100 aa11.95□□□□□ -0.5
NEK9-209ENST00000556170 C5orf17Q8NAS9 161 aa11.95□□□□□ -0.5
NEK9-209ENST00000556170 LINC00527Q9UJ94 153 aa11.95□□□□□ -0.5
NEK9-209ENST00000556170 NBR2O15453 112 aa11.94□□□□□ -0.5
NEK9-209ENST00000556170 NBL1P41271 181 aa11.94□□□□□ -0.5
NEK9-209ENST00000556170 RNASE8Q8TDE3 154 aaKnown RBP11.94□□□□□ -0.5
NEK9-209ENST00000556170 OR2T8A6NH00 312 aa11.94□□□□□ -0.5
NEK9-209ENST00000556170 MFAP4P55083 255 aa11.94□□□□□ -0.5
NEK9-209ENST00000556170 GPR82Q96P67 336 aa11.94□□□□□ -0.5
NEK9-209ENST00000556170 C1RLQ9NZP8 487 aa11.94□□□□□ -0.5
NEK9-209ENST00000556170 GAGE10A6NGK3 116 aa11.94□□□□□ -0.5
NEK9-209ENST00000556170 J3QR89 54 aa11.94□□□□□ -0.5
NEK9-209ENST00000556170 OSTCQ9NRP0 149 aa11.94□□□□□ -0.5
NEK9-209ENST00000556170 M0QZ24 198 aa11.94□□□□□ -0.5
NEK9-209ENST00000556170 C3orf36Q3SXR2 165 aa11.94□□□□□ -0.5
NEK9-209ENST00000556170 COX19Q49B96 90 aa11.94□□□□□ -0.5
NEK9-209ENST00000556170 FA2HQ7L5A8 372 aa11.94□□□□□ -0.5
NEK9-209ENST00000556170 MRPL36Q9P0J6 103 aaKnown RBP11.94□□□□□ -0.5
NEK9-209ENST00000556170 POLR3KQ9Y2Y1 108 aaPredicted RBP11.94□□□□□ -0.5
NEK9-209ENST00000556170 NIT1Q86X76 327 aa11.93□□□□□ -0.5
NEK9-209ENST00000556170 NDFIP1Q9BT67 221 aa11.93□□□□□ -0.5
NEK9-209ENST00000556170 NCOR1P1Q9H4R4 102 aa11.93□□□□□ -0.5
NEK9-209ENST00000556170 ADGRG4Q8IZF6 3080 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms