RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 GATAD1Q8WUU5 269 aa8.47□□□□□ -1.05
TMEM260-208ENST00000555905 RNF141Q8WVD5 230 aa8.47□□□□□ -1.05
TMEM260-208ENST00000555905 CITED1Q99966 193 aa8.47□□□□□ -1.05
TMEM260-208ENST00000555905 C20orf24Q9BUV8 137 aa8.47□□□□□ -1.05
TMEM260-208ENST00000555905 PFDN2Q9UHV9 154 aa8.47□□□□□ -1.05
TMEM260-208ENST00000555905 RABAC1Q9UI14 185 aa8.47□□□□□ -1.05
TMEM260-208ENST00000555905 HIGD1AQ9Y241 93 aa8.47□□□□□ -1.05
TMEM260-208ENST00000555905 A0A1W2PPV4 95 aa8.46□□□□□ -1.06
TMEM260-208ENST00000555905 FAM122CQ6P4D5 195 aa8.46□□□□□ -1.06
TMEM260-208ENST00000555905 C12orf54Q6X4T0 127 aa8.46□□□□□ -1.06
TMEM260-208ENST00000555905 C1QL4Q86Z23 238 aa8.46□□□□□ -1.06
TMEM260-208ENST00000555905 C3orf56Q8N813 242 aa8.46□□□□□ -1.06
TMEM260-208ENST00000555905 FAM213BQ8TBF2 198 aa8.46□□□□□ -1.06
TMEM260-208ENST00000555905 LRRC20Q8TCA0 184 aa8.46□□□□□ -1.06
TMEM260-208ENST00000555905 TMEM190Q8WZ59 177 aa8.46□□□□□ -1.06
TMEM260-208ENST00000555905 RCC1LQ96I51 464 aaKnown RBP8.46□□□□□ -1.06
TMEM260-208ENST00000555905 NARS2Q96I59 477 aaKnown RBP8.46□□□□□ -1.06
TMEM260-208ENST00000555905 RAX2Q96IS3 184 aa8.46□□□□□ -1.06
TMEM260-208ENST00000555905 METTL26Q96S19 204 aa8.46□□□□□ -1.06
TMEM260-208ENST00000555905 ACTR3CQ9C0K3 210 aaPredicted RBP8.46□□□□□ -1.06
TMEM260-208ENST00000555905 VSIRQ9H7M9 311 aa8.46□□□□□ -1.06
TMEM260-208ENST00000555905 RPRMQ9NS64 109 aa8.46□□□□□ -1.06
TMEM260-208ENST00000555905 RNF24Q9Y225 148 aa8.46□□□□□ -1.06
TMEM260-208ENST00000555905 UFC1Q9Y3C8 167 aa8.46□□□□□ -1.06
TMEM260-208ENST00000555905 ATRQ13535 2644 aa8.46□□□□□ -1.06
TMEM260-208ENST00000555905 IGHV3OR16-8A0A075B7F1 116 aa8.45□□□□□ -1.06
TMEM260-208ENST00000555905 ADARB2-AS1A8MUL3 147 aa8.45□□□□□ -1.06
TMEM260-208ENST00000555905 ZNF705EA8MWA4 302 aaPredicted RBP8.45□□□□□ -1.06
TMEM260-208ENST00000555905 LGALS9O00182 355 aa8.45□□□□□ -1.06
TMEM260-208ENST00000555905 NPPCP23582 126 aa8.45□□□□□ -1.06
TMEM260-208ENST00000555905 CDC34P49427 236 aaPredicted RBP8.45□□□□□ -1.06
TMEM260-208ENST00000555905 SLURP1P55000 103 aa8.45□□□□□ -1.06
TMEM260-208ENST00000555905 SYNJ2BPP57105 145 aa8.45□□□□□ -1.06
TMEM260-208ENST00000555905 RAB14P61106 215 aa8.45□□□□□ -1.06
TMEM260-208ENST00000555905 IFITM2Q01629 132 aa8.45□□□□□ -1.06
TMEM260-208ENST00000555905 KLF5Q13887 457 aaPredicted RBP8.45□□□□□ -1.06
TMEM260-208ENST00000555905 USF2Q15853 346 aaPredicted RBP8.45□□□□□ -1.06
TMEM260-208ENST00000555905 FAM78BQ5VT40 261 aa8.45□□□□□ -1.06
TMEM260-208ENST00000555905 UNQ9165/PRO28630Q6UXU0 137 aa8.45□□□□□ -1.06
TMEM260-208ENST00000555905 PATE2Q6UY27 113 aa8.45□□□□□ -1.06
TMEM260-208ENST00000555905 LINC00305Q7Z4B0 112 aa8.45□□□□□ -1.06
TMEM260-208ENST00000555905 REC114Q7Z4M0 266 aa8.45□□□□□ -1.06
TMEM260-208ENST00000555905 TMEM37Q8WXS4 190 aa8.45□□□□□ -1.06
TMEM260-208ENST00000555905 ZNF414Q96IQ9 312 aa8.45□□□□□ -1.06
TMEM260-208ENST00000555905 DUX3Q96PT4 197 aa8.45□□□□□ -1.06
TMEM260-208ENST00000555905 ZNF747Q9BV97 191 aa8.45□□□□□ -1.06
TMEM260-208ENST00000555905 MRPL32Q9BYC8 188 aaKnown RBP8.45□□□□□ -1.06
TMEM260-208ENST00000555905 DAZ1Q9NQZ3 744 aaKnown RBP8.45□□□□□ -1.06
TMEM260-208ENST00000555905 MRPL27Q9P0M9 148 aaKnown RBP8.45□□□□□ -1.06
TMEM260-208ENST00000555905 SEC14L6B5MCN3 397 aa8.44□□□□□ -1.06
TMEM260-208ENST00000555905 K7EMT4 169 aa8.44□□□□□ -1.06
TMEM260-208ENST00000555905 ZNF207O43670 478 aaKnown RBP8.44□□□□□ -1.06
TMEM260-208ENST00000555905 MYCNOSP40205 109 aa8.44□□□□□ -1.06
TMEM260-208ENST00000555905 FHITP49789 147 aa8.44□□□□□ -1.06
TMEM260-208ENST00000555905 TAS2R45P59539 299 aa8.44□□□□□ -1.06
TMEM260-208ENST00000555905 FHL3Q13643 280 aa8.44□□□□□ -1.06
TMEM260-208ENST00000555905 RPP25LQ8N5L8 163 aaKnown RBP8.44□□□□□ -1.06
TMEM260-208ENST00000555905 OR4F17Q8NGA8 305 aa8.44□□□□□ -1.06
TMEM260-208ENST00000555905 SAT2Q96F10 170 aaPredicted RBP8.44□□□□□ -1.06
TMEM260-208ENST00000555905 UHRF2Q96PU4 802 aa8.44□□□□□ -1.06
TMEM260-208ENST00000555905 OR4F4Q96R69 305 aa8.44□□□□□ -1.06
TMEM260-208ENST00000555905 SHANK2-AS3Q9BTD1 123 aa8.44□□□□□ -1.06
TMEM260-208ENST00000555905 SLC25A39Q9BZJ4 359 aaPredicted RBP8.44□□□□□ -1.06
TMEM260-208ENST00000555905 SLC25A22Q9H936 323 aa8.44□□□□□ -1.06
TMEM260-208ENST00000555905 SEPSECSQ9HD40 501 aaKnown RBP8.44□□□□□ -1.06
TMEM260-208ENST00000555905 PEMTQ9UBM1 199 aa8.44□□□□□ -1.06
TMEM260-208ENST00000555905 FUT9Q9Y231 359 aa8.44□□□□□ -1.06
TMEM260-208ENST00000555905 FBN1P35555 2871 aaKnown RBP8.43□□□□□ -1.06
TMEM260-208ENST00000555905 CTXND1A0A1B0GTU2 59 aa8.43□□□□□ -1.06
TMEM260-208ENST00000555905 A0A1W2PS18 150 aa8.43□□□□□ -1.06
TMEM260-208ENST00000555905 A8MWP6 167 aa8.43□□□□□ -1.06
TMEM260-208ENST00000555905 H3BRN7 92 aa8.43□□□□□ -1.06
TMEM260-208ENST00000555905 TEX46H3BTG2 121 aa8.43□□□□□ -1.06
TMEM260-208ENST00000555905 PF4P02776 101 aa8.43□□□□□ -1.06
TMEM260-208ENST00000555905 H2AFB1P0C5Y9 115 aa8.43□□□□□ -1.06
TMEM260-208ENST00000555905 CRYBB3P26998 211 aa8.43□□□□□ -1.06
TMEM260-208ENST00000555905 BMI1P35226 326 aa8.43□□□□□ -1.06
TMEM260-208ENST00000555905 BLOC1S1P78537 153 aa8.43□□□□□ -1.06
TMEM260-208ENST00000555905 TM4SF20Q53R12 229 aa8.43□□□□□ -1.06
TMEM260-208ENST00000555905 SHISA2Q6UWI4 295 aa8.43□□□□□ -1.06
TMEM260-208ENST00000555905 MIR17HGQ75NE6 70 aa8.43□□□□□ -1.06
TMEM260-208ENST00000555905 RAB24Q969Q5 203 aa8.43□□□□□ -1.06
TMEM260-208ENST00000555905 GRAMD2BQ96HH9 432 aa8.43□□□□□ -1.06
TMEM260-208ENST00000555905 TECRQ9NZ01 308 aaKnown RBP8.43□□□□□ -1.06
TMEM260-208ENST00000555905 MAP1LC3B2A6NCE7 125 aa8.42□□□□□ -1.06
TMEM260-208ENST00000555905 ZNF98A6NK75 572 aa8.42□□□□□ -1.06
TMEM260-208ENST00000555905 RGS13O14921 159 aa8.42□□□□□ -1.06
TMEM260-208ENST00000555905 C8orf88P0DMB2 117 aa8.42□□□□□ -1.06
TMEM260-208ENST00000555905 KHDC3LQ587J8 217 aa8.42□□□□□ -1.06
TMEM260-208ENST00000555905 SPATA31B1PQ5VZV4 182 aa8.42□□□□□ -1.06
TMEM260-208ENST00000555905 LCN15Q6UWW0 184 aa8.42□□□□□ -1.06
TMEM260-208ENST00000555905 STXBP6Q8NFX7 210 aa8.42□□□□□ -1.06
TMEM260-208ENST00000555905 OR9G4Q8NGQ1 327 aa8.42□□□□□ -1.06
TMEM260-208ENST00000555905 SFT2D1Q8WV19 159 aa8.42□□□□□ -1.06
TMEM260-208ENST00000555905 DLX4Q92988 240 aaPredicted RBP8.42□□□□□ -1.06
TMEM260-208ENST00000555905 SCRT1Q9BWW7 348 aa8.42□□□□□ -1.06
TMEM260-208ENST00000555905 MAP1LC3BQ9GZQ8 125 aa8.42□□□□□ -1.06
TMEM260-208ENST00000555905 TMEM231Q9H6L2 316 aa8.42□□□□□ -1.06
TMEM260-208ENST00000555905 IGHV3-49A0A0A0MS15 119 aa8.41□□□□□ -1.06
TMEM260-208ENST00000555905 TRAV5A0A0B4J249 113 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms