RNA–Protein interactions for RNA: ENST00000555565.5

TDP1-212, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 524 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-212ENST00000555565 CELA1Q9UNI1 258 aa7.77□□□□□ -1.17
TDP1-212ENST00000555565 HLA-DRB4X5D2U9 266 aa7.77□□□□□ -1.17
TDP1-212ENST00000555565 TRAV10A0A0B4J240 114 aa7.76□□□□□ -1.17
TDP1-212ENST00000555565 SNRPGP15A8MWD9 76 aa7.76□□□□□ -1.17
TDP1-212ENST00000555565 SOCS3O14543 225 aa7.76□□□□□ -1.17
TDP1-212ENST00000555565 SFT2D2O95562 160 aa7.76□□□□□ -1.17
TDP1-212ENST00000555565 RAB11AP62491 216 aa7.76□□□□□ -1.17
TDP1-212ENST00000555565 PPP1R1AQ13522 171 aa7.76□□□□□ -1.17
TDP1-212ENST00000555565 OR2F1Q13607 317 aa7.76□□□□□ -1.17
TDP1-212ENST00000555565 C1orf194Q5T5A4 169 aa7.76□□□□□ -1.17
TDP1-212ENST00000555565 GSG1LQ6UXU4 331 aa7.76□□□□□ -1.17
TDP1-212ENST00000555565 CCDC190Q86UF4 302 aa7.76□□□□□ -1.17
TDP1-212ENST00000555565 THAP8Q8NA92 274 aa7.76□□□□□ -1.17
TDP1-212ENST00000555565 MAGT1Q9H0U3 335 aa7.76□□□□□ -1.17
TDP1-212ENST00000555565 TMED3Q9Y3Q3 217 aa7.76□□□□□ -1.17
TDP1-212ENST00000555565 IGHV4-4A0A075B6R2 117 aa7.75□□□□□ -1.17
TDP1-212ENST00000555565 PRSS46E5RG02 174 aa7.75□□□□□ -1.17
TDP1-212ENST00000555565 SYNGR2O43760 224 aa7.75□□□□□ -1.17
TDP1-212ENST00000555565 IGKV3-20P01619 116 aa7.75□□□□□ -1.17
TDP1-212ENST00000555565 FABP1P07148 127 aa7.75□□□□□ -1.17
TDP1-212ENST00000555565 HOXB5P09067 269 aa7.75□□□□□ -1.17
TDP1-212ENST00000555565 C12orf74Q32Q52 190 aa7.75□□□□□ -1.17
TDP1-212ENST00000555565 ZNF705AQ6ZN79 300 aaPredicted RBP7.75□□□□□ -1.17
TDP1-212ENST00000555565 ZNF767PQ75MW2 155 aa7.75□□□□□ -1.17
TDP1-212ENST00000555565 DEDD2Q8WXF8 326 aa7.75□□□□□ -1.17
TDP1-212ENST00000555565 LINC00052Q96N35 136 aa7.75□□□□□ -1.17
TDP1-212ENST00000555565 SAV1Q9H4B6 383 aaPredicted RBP7.75□□□□□ -1.17
TDP1-212ENST00000555565 PAIP2BQ9ULR5 123 aaKnown RBP7.75□□□□□ -1.17
TDP1-212ENST00000555565 CCDC160A6NGH7 325 aa7.74□□□□□ -1.17
TDP1-212ENST00000555565 ZNF705FA8MVS1 300 aaPredicted RBP7.74□□□□□ -1.17
TDP1-212ENST00000555565 M0R2N4 97 aa7.74□□□□□ -1.17
TDP1-212ENST00000555565 WRBO00258 174 aa7.74□□□□□ -1.17
TDP1-212ENST00000555565 MED6O75586 246 aa7.74□□□□□ -1.17
TDP1-212ENST00000555565 ZNF705DP0CH99 300 aaPredicted RBP7.74□□□□□ -1.17
TDP1-212ENST00000555565 ZNF705BP0CI00 300 aaPredicted RBP7.74□□□□□ -1.17
TDP1-212ENST00000555565 S100A5P33763 92 aa7.74□□□□□ -1.17
TDP1-212ENST00000555565 ID1P41134 155 aa7.74□□□□□ -1.17
TDP1-212ENST00000555565 PSMB3P49720 205 aa7.74□□□□□ -1.17
TDP1-212ENST00000555565 FXYD7P58549 80 aa7.74□□□□□ -1.17
TDP1-212ENST00000555565 GGNBP1Q5YKI7 109 aa7.74□□□□□ -1.17
TDP1-212ENST00000555565 FOXI2Q6ZQN5 318 aa7.74□□□□□ -1.17
TDP1-212ENST00000555565 OR8I2Q8N0Y5 310 aa7.74□□□□□ -1.17
TDP1-212ENST00000555565 CENPSQ8N2Z9 138 aa7.74□□□□□ -1.17
TDP1-212ENST00000555565 ZNF709Q8N972 641 aa7.74□□□□□ -1.17
TDP1-212ENST00000555565 C17orf77Q96MU5 243 aa7.74□□□□□ -1.17
TDP1-212ENST00000555565 CLUHP3Q96NS8 147 aa7.74□□□□□ -1.17
TDP1-212ENST00000555565 CIB3Q96Q77 187 aaPredicted RBP7.74□□□□□ -1.17
TDP1-212ENST00000555565 NEU1Q99519 415 aa7.74□□□□□ -1.17
TDP1-212ENST00000555565 RNF126Q9BV68 326 aa7.74□□□□□ -1.17
TDP1-212ENST00000555565 SCRT1Q9BWW7 348 aa7.74□□□□□ -1.17
TDP1-212ENST00000555565 RBM38Q9H0Z9 239 aaKnown RBP7.74□□□□□ -1.17
TDP1-212ENST00000555565 DEFB131BA0A096LNP1 70 aa7.73□□□□□ -1.17
TDP1-212ENST00000555565 F6UB75 175 aa7.73□□□□□ -1.17
TDP1-212ENST00000555565 ISLRO14498 428 aa7.73□□□□□ -1.17
TDP1-212ENST00000555565 CDK2AP2O75956 126 aa7.73□□□□□ -1.17
TDP1-212ENST00000555565 GATA2P23769 480 aaPredicted RBP7.73□□□□□ -1.17
TDP1-212ENST00000555565 LGALS9BQ3B8N2 356 aa7.73□□□□□ -1.17
TDP1-212ENST00000555565 TMEM182Q6ZP80 229 aaPredicted RBP7.73□□□□□ -1.17
TDP1-212ENST00000555565 POM121L12Q8N7R1 296 aa7.73□□□□□ -1.17
TDP1-212ENST00000555565 OR4B1Q8NGF8 309 aa7.73□□□□□ -1.17
TDP1-212ENST00000555565 COQ8AQ8NI60 647 aa7.73□□□□□ -1.17
TDP1-212ENST00000555565 PPP1R14BQ96C90 147 aa7.73□□□□□ -1.17
TDP1-212ENST00000555565 SRRQ9GZT4 340 aa7.73□□□□□ -1.17
TDP1-212ENST00000555565 DNAH5Q8TE73 4624 aa7.73□□□□□ -1.17
TDP1-212ENST00000555565 A0A0J9YX75 114 aa7.72□□□□□ -1.17
TDP1-212ENST00000555565 C9orf170A2RU37 121 aa7.72□□□□□ -1.17
TDP1-212ENST00000555565 H3BP45 60 aa7.72□□□□□ -1.17
TDP1-212ENST00000555565 ADAP1O75689 374 aa7.72□□□□□ -1.17
TDP1-212ENST00000555565 CFDP00746 253 aaPredicted RBP7.72□□□□□ -1.17
TDP1-212ENST00000555565 AMBPP02760 352 aa7.72□□□□□ -1.17
TDP1-212ENST00000555565 PAX9P55771 341 aa7.72□□□□□ -1.17
TDP1-212ENST00000555565 RPP30P78346 268 aaKnown RBP7.72□□□□□ -1.17
TDP1-212ENST00000555565 ID3Q02535 119 aa7.72□□□□□ -1.17
TDP1-212ENST00000555565 SPANXN5Q5MJ07 72 aa7.72□□□□□ -1.17
TDP1-212ENST00000555565 FAM78BQ5VT40 261 aa7.72□□□□□ -1.17
TDP1-212ENST00000555565 SPATA31B1PQ5VZV4 182 aa7.72□□□□□ -1.17
TDP1-212ENST00000555565 Q6ZR54 194 aa7.72□□□□□ -1.17
TDP1-212ENST00000555565 MAPKAPK5-AS1Q8N8E1 139 aa7.72□□□□□ -1.17
TDP1-212ENST00000555565 C20orf173Q96LM9 149 aa7.72□□□□□ -1.17
TDP1-212ENST00000555565 SLC35B3Q9H1N7 401 aa7.72□□□□□ -1.17
TDP1-212ENST00000555565 SLC25A32Q9H2D1 315 aa7.72□□□□□ -1.17
TDP1-212ENST00000555565 SLC45A2Q9UMX9 530 aa7.72□□□□□ -1.17
TDP1-212ENST00000555565 IGHV3OR16-12A0A075B7B8 117 aa7.71□□□□□ -1.18
TDP1-212ENST00000555565 SMIM9A6NGZ8 99 aa7.71□□□□□ -1.18
TDP1-212ENST00000555565 ZNF98A6NK75 572 aa7.71□□□□□ -1.18
TDP1-212ENST00000555565 NDUFB6O95139 128 aa7.71□□□□□ -1.18
TDP1-212ENST00000555565 ORM2P19652 201 aa7.71□□□□□ -1.18
TDP1-212ENST00000555565 GALR1P47211 349 aa7.71□□□□□ -1.18
TDP1-212ENST00000555565 MEOX2P50222 304 aa7.71□□□□□ -1.18
TDP1-212ENST00000555565 EMP1P54849 157 aa7.71□□□□□ -1.18
TDP1-212ENST00000555565 UBE2MP61081 183 aaKnown RBP7.71□□□□□ -1.18
TDP1-212ENST00000555565 POLR2GP62487 172 aaKnown RBP eCLIP7.71□□□□□ -1.18
TDP1-212ENST00000555565 PSG9Q00887 426 aa7.71□□□□□ -1.18
TDP1-212ENST00000555565 BAK1Q16611 211 aa7.71□□□□□ -1.18
TDP1-212ENST00000555565 SPANXN2Q5MJ10 180 aa7.71□□□□□ -1.18
TDP1-212ENST00000555565 EBLN2Q6P2I7 272 aa7.71□□□□□ -1.18
TDP1-212ENST00000555565 ACOT7LQ6ZUV0 252 aa7.71□□□□□ -1.18
TDP1-212ENST00000555565 C1orf158Q8N1D5 194 aa7.71□□□□□ -1.18
TDP1-212ENST00000555565 BPIFCQ8NFQ6 507 aa7.71□□□□□ -1.18
TDP1-212ENST00000555565 C16orf92Q96LL3 132 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms