RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 ANGPT4Q9Y264 503 aa2.33□□□□□ -2.04
CKS1BP1-201ENST00000555221 C15orf41Q9Y2V0 281 aa2.33□□□□□ -2.04
CKS1BP1-201ENST00000555221 HDGFL3Q9Y3E1 203 aa2.33□□□□□ -2.04
CKS1BP1-201ENST00000555221 FAM32AQ9Y421 112 aaKnown RBP2.33□□□□□ -2.04
CKS1BP1-201ENST00000555221 SPTBN1Q01082 2364 aaKnown RBP2.33□□□□□ -2.04
CKS1BP1-201ENST00000555221 LRBAP50851 2863 aa2.33□□□□□ -2.04
CKS1BP1-201ENST00000555221 BOD1L1Q8NFC6 3051 aa2.33□□□□□ -2.04
CKS1BP1-201ENST00000555221 RYR3Q15413 4870 aa2.33□□□□□ -2.04
CKS1BP1-201ENST00000555221 SCN3AQ9NY46 2000 aa2.32□□□□□ -2.04
CKS1BP1-201ENST00000555221 MED13Q9UHV7 2174 aa2.32□□□□□ -2.04
CKS1BP1-201ENST00000555221 A0A0A6YYH2 397 aa2.32□□□□□ -2.04
CKS1BP1-201ENST00000555221 A0A0J9YX75 114 aa2.32□□□□□ -2.04
CKS1BP1-201ENST00000555221 TEX50A0A1B0GTY4 177 aa2.32□□□□□ -2.04
CKS1BP1-201ENST00000555221 A6NJ64 397 aa2.32□□□□□ -2.04
CKS1BP1-201ENST00000555221 FAAHO00519 579 aa2.32□□□□□ -2.04
CKS1BP1-201ENST00000555221 FADS1O60427 444 aa2.32□□□□□ -2.04
CKS1BP1-201ENST00000555221 PSMG1O95456 288 aa2.32□□□□□ -2.04
CKS1BP1-201ENST00000555221 ATP5G1P05496 136 aa2.32□□□□□ -2.04
CKS1BP1-201ENST00000555221 GPX2P18283 190 aa2.32□□□□□ -2.04
CKS1BP1-201ENST00000555221 NPPCP23582 126 aa2.32□□□□□ -2.04
CKS1BP1-201ENST00000555221 IFNGR2P38484 337 aa2.32□□□□□ -2.04
CKS1BP1-201ENST00000555221 CD200P41217 278 aa2.32□□□□□ -2.04
CKS1BP1-201ENST00000555221 CDK9P50750 372 aaKnown RBP2.32□□□□□ -2.04
CKS1BP1-201ENST00000555221 CTBP2P56545 445 aa2.32□□□□□ -2.04
CKS1BP1-201ENST00000555221 TAS2R45P59539 299 aa2.32□□□□□ -2.04
CKS1BP1-201ENST00000555221 HERVK_113P63121 156 aa2.32□□□□□ -2.04
CKS1BP1-201ENST00000555221 HBA1P69905 142 aa2.32□□□□□ -2.04
CKS1BP1-201ENST00000555221 CDK6Q00534 326 aa2.32□□□□□ -2.04
CKS1BP1-201ENST00000555221 TMEM267Q0VDI3 215 aaPredicted RBP2.32□□□□□ -2.04
CKS1BP1-201ENST00000555221 FOXF1Q12946 379 aa2.32□□□□□ -2.04
CKS1BP1-201ENST00000555221 SRSF6Q13247 344 aaKnown RBP2.32□□□□□ -2.04
CKS1BP1-201ENST00000555221 MED21Q13503 144 aa2.32□□□□□ -2.04
CKS1BP1-201ENST00000555221 LIN52Q52LA3 116 aa2.32□□□□□ -2.04
CKS1BP1-201ENST00000555221 RPS27LQ71UM5 84 aaKnown RBP2.32□□□□□ -2.04
CKS1BP1-201ENST00000555221 GRINAQ7Z429 371 aa2.32□□□□□ -2.04
CKS1BP1-201ENST00000555221 LINC00471Q8N535 108 aa2.32□□□□□ -2.04
CKS1BP1-201ENST00000555221 TMEM251Q8N6I4 163 aa2.32□□□□□ -2.04
CKS1BP1-201ENST00000555221 OR8J3Q8NGG0 315 aa2.32□□□□□ -2.04
CKS1BP1-201ENST00000555221 OR2D3Q8NGH3 330 aa2.32□□□□□ -2.04
CKS1BP1-201ENST00000555221 ZNF563Q8TA94 476 aa2.32□□□□□ -2.04
CKS1BP1-201ENST00000555221 FNDC9Q8TBE3 224 aa2.32□□□□□ -2.04
CKS1BP1-201ENST00000555221 Q8WTZ3 238 aa2.32□□□□□ -2.04
CKS1BP1-201ENST00000555221 RMND5BQ96G75 393 aaPredicted RBP2.32□□□□□ -2.04
CKS1BP1-201ENST00000555221 SDF2Q99470 211 aa2.32□□□□□ -2.04
CKS1BP1-201ENST00000555221 NKX6-2Q9C056 277 aaPredicted RBP2.32□□□□□ -2.04
CKS1BP1-201ENST00000555221 MS4A6AQ9H2W1 248 aa2.32□□□□□ -2.04
CKS1BP1-201ENST00000555221 BCL2L10Q9HD36 194 aa2.32□□□□□ -2.04
CKS1BP1-201ENST00000555221 SAR1AQ9NR31 198 aa2.32□□□□□ -2.04
CKS1BP1-201ENST00000555221 FGFR1OP2Q9NVK5 253 aa2.32□□□□□ -2.04
CKS1BP1-201ENST00000555221 CCDC167Q9P0B6 97 aa2.32□□□□□ -2.04
CKS1BP1-201ENST00000555221 ARL2BPQ9Y2Y0 163 aa2.32□□□□□ -2.04
CKS1BP1-201ENST00000555221 CHCHD2Q9Y6H1 151 aaPredicted RBP2.32□□□□□ -2.04
CKS1BP1-201ENST00000555221 BIRC6Q9NR09 4857 aa2.32□□□□□ -2.04
CKS1BP1-201ENST00000555221 ATMQ13315 3056 aa2.31□□□□□ -2.04
CKS1BP1-201ENST00000555221 TINCRA0A1B0GVN0 87 aa2.31□□□□□ -2.04
CKS1BP1-201ENST00000555221 HMGN4O00479 90 aa2.31□□□□□ -2.04
CKS1BP1-201ENST00000555221 MRASO14807 208 aa2.31□□□□□ -2.04
CKS1BP1-201ENST00000555221 FAM107AO95990 144 aa2.31□□□□□ -2.04
CKS1BP1-201ENST00000555221 IGF2P01344 180 aa2.31□□□□□ -2.04
CKS1BP1-201ENST00000555221 TFPTP0C1Z6 253 aa2.31□□□□□ -2.04
CKS1BP1-201ENST00000555221 CCL3P10147 92 aa2.31□□□□□ -2.04
CKS1BP1-201ENST00000555221 COX6B1P14854 86 aa2.31□□□□□ -2.04
CKS1BP1-201ENST00000555221 POLR2HP52434 150 aaKnown RBP2.31□□□□□ -2.04
CKS1BP1-201ENST00000555221 C3orf33Q6P1S2 294 aa2.31□□□□□ -2.04
CKS1BP1-201ENST00000555221 MYO7BQ6PIF6 2116 aa2.31□□□□□ -2.04
CKS1BP1-201ENST00000555221 C1orf174Q8IYL3 243 aa2.31□□□□□ -2.04
CKS1BP1-201ENST00000555221 PIGXQ8TBF5 258 aa2.31□□□□□ -2.04
CKS1BP1-201ENST00000555221 ASB13Q8WXK3 278 aa2.31□□□□□ -2.04
CKS1BP1-201ENST00000555221 MUCL1Q96DR8 90 aa2.31□□□□□ -2.04
CKS1BP1-201ENST00000555221 CGREF1Q99674 301 aa2.31□□□□□ -2.04
CKS1BP1-201ENST00000555221 C20orf27Q9GZN8 174 aa2.31□□□□□ -2.04
CKS1BP1-201ENST00000555221 OR51I1Q9H343 314 aa2.31□□□□□ -2.04
CKS1BP1-201ENST00000555221 RNF122Q9H9V4 155 aa2.31□□□□□ -2.04
CKS1BP1-201ENST00000555221 ACER3Q9NUN7 267 aa2.31□□□□□ -2.04
CKS1BP1-201ENST00000555221 PLEKHJ1Q9NW61 149 aa2.31□□□□□ -2.04
CKS1BP1-201ENST00000555221 MED11Q9P086 117 aa2.31□□□□□ -2.04
CKS1BP1-201ENST00000555221 DIDO1Q9BTC0 2240 aaKnown RBP2.31□□□□□ -2.04
CKS1BP1-201ENST00000555221 SPENQ96T58 3664 aaKnown RBP2.31□□□□□ -2.04
CKS1BP1-201ENST00000555221 C19orf71A6NCJ1 209 aa2.3□□□□□ -2.04
CKS1BP1-201ENST00000555221 KNCNA6PVL3 124 aa2.3□□□□□ -2.04
CKS1BP1-201ENST00000555221 SLC17A3O00476 420 aa2.3□□□□□ -2.04
CKS1BP1-201ENST00000555221 GSTZ1O43708 216 aaPredicted RBP2.3□□□□□ -2.04
CKS1BP1-201ENST00000555221 MRPL33O75394 65 aaKnown RBP2.3□□□□□ -2.04
CKS1BP1-201ENST00000555221 AHSA1O95433 338 aa2.3□□□□□ -2.04
CKS1BP1-201ENST00000555221 COX4I1P13073 169 aa2.3□□□□□ -2.04
CKS1BP1-201ENST00000555221 OR10J1P30954 320 aa2.3□□□□□ -2.04
CKS1BP1-201ENST00000555221 DAPP51397 102 aa2.3□□□□□ -2.04
CKS1BP1-201ENST00000555221 GNGT1P63211 74 aa2.3□□□□□ -2.04
CKS1BP1-201ENST00000555221 SELENOWP63302 87 aa2.3□□□□□ -2.04
CKS1BP1-201ENST00000555221 MOGQ16653 247 aa2.3□□□□□ -2.04
CKS1BP1-201ENST00000555221 TNFAIP8L2Q6P589 184 aaPredicted RBP2.3□□□□□ -2.04
CKS1BP1-201ENST00000555221 DHRS4L2Q6PKH6 230 aa2.3□□□□□ -2.04
CKS1BP1-201ENST00000555221 RNASE6Q93091 150 aaKnown RBP2.3□□□□□ -2.04
CKS1BP1-201ENST00000555221 ARL5BQ96KC2 179 aa2.3□□□□□ -2.04
CKS1BP1-201ENST00000555221 OR52B2Q96RD2 323 aa2.3□□□□□ -2.04
CKS1BP1-201ENST00000555221 C16orf95Q9H693 158 aa2.3□□□□□ -2.04
CKS1BP1-201ENST00000555221 FAIMQ9NVQ4 179 aa2.3□□□□□ -2.04
CKS1BP1-201ENST00000555221 MINOS1-NBL1R4GNA1 71 aa2.3□□□□□ -2.04
CKS1BP1-201ENST00000555221 SNRNP200O75643 2136 aaKnown RBP2.3□□□□□ -2.04
CKS1BP1-201ENST00000555221 ZGRF1Q86YA3 2104 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms