RNA–Protein interactions for RNA: ENST00000554975.5

SHMT2-216, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-216ENST00000554975 A0A0U1RQK1 487 aa8.78□□□□□ -1
SHMT2-216ENST00000554975 A0A1W2PPQ1 181 aa8.78□□□□□ -1
SHMT2-216ENST00000554975 A0A1W2PRD5 423 aa8.78□□□□□ -1
SHMT2-216ENST00000554975 A0A1W2PRF3 423 aa8.78□□□□□ -1
SHMT2-216ENST00000554975 A0A1W2PRM7 423 aa8.78□□□□□ -1
SHMT2-216ENST00000554975 SLC25A17O43808 307 aa8.78□□□□□ -1
SHMT2-216ENST00000554975 NDUFB4O95168 129 aa8.78□□□□□ -1
SHMT2-216ENST00000554975 IGLV1-47P01700 117 aa8.78□□□□□ -1
SHMT2-216ENST00000554975 IGLV2-23P01705 113 aa8.78□□□□□ -1
SHMT2-216ENST00000554975 IGHV1-69P01742 117 aa8.78□□□□□ -1
SHMT2-216ENST00000554975 TRGC2P03986 189 aa8.78□□□□□ -1
SHMT2-216ENST00000554975 LINC00869P0C866 280 aa8.78□□□□□ -1
SHMT2-216ENST00000554975 IER3P46695 156 aa8.78□□□□□ -1
SHMT2-216ENST00000554975 GAMTQ14353 236 aa8.78□□□□□ -1
SHMT2-216ENST00000554975 PSG5Q15238 335 aa8.78□□□□□ -1
SHMT2-216ENST00000554975 S100A7AQ86SG5 101 aa8.78□□□□□ -1
SHMT2-216ENST00000554975 LY6G5BQ8NDX9 201 aa8.78□□□□□ -1
SHMT2-216ENST00000554975 SFRP2Q96HF1 295 aa8.78□□□□□ -1
SHMT2-216ENST00000554975 SACSQ9NZJ4 4579 aa8.77□□□□□ -1.01
SHMT2-216ENST00000554975 SCO2A0A1W2PP80 73 aa8.77□□□□□ -1.01
SHMT2-216ENST00000554975 OOSP1A8MZH6 123 aa8.77□□□□□ -1.01
SHMT2-216ENST00000554975 K7EIL1 84 aa8.77□□□□□ -1.01
SHMT2-216ENST00000554975 REG1BP48304 166 aa8.77□□□□□ -1.01
SHMT2-216ENST00000554975 DLX1P56177 255 aa8.77□□□□□ -1.01
SHMT2-216ENST00000554975 NDUFA6P56556 154 aa8.77□□□□□ -1.01
SHMT2-216ENST00000554975 UBE2L3P68036 154 aaKnown RBP8.77□□□□□ -1.01
SHMT2-216ENST00000554975 KLRD1Q13241 179 aa8.77□□□□□ -1.01
SHMT2-216ENST00000554975 PRSS8Q16651 343 aa8.77□□□□□ -1.01
SHMT2-216ENST00000554975 TIGITQ495A1 244 aa8.77□□□□□ -1.01
SHMT2-216ENST00000554975 PVRIGQ6DKI7 326 aa8.77□□□□□ -1.01
SHMT2-216ENST00000554975 OR10G8Q8NGN5 311 aa8.77□□□□□ -1.01
SHMT2-216ENST00000554975 OR1P1Q8NH06 330 aa8.77□□□□□ -1.01
SHMT2-216ENST00000554975 TRGV9Q99603 122 aa8.77□□□□□ -1.01
SHMT2-216ENST00000554975 SIGLEC9Q9Y336 463 aa8.77□□□□□ -1.01
SHMT2-216ENST00000554975 TRBV9A0A0B4J1U6 114 aa8.76□□□□□ -1.01
SHMT2-216ENST00000554975 IGHV1-3A0A0C4DH29 117 aa8.76□□□□□ -1.01
SHMT2-216ENST00000554975 A0A1W2PPI3 338 aa8.76□□□□□ -1.01
SHMT2-216ENST00000554975 BUB1B-PAK6H3BSN5 160 aa8.76□□□□□ -1.01
SHMT2-216ENST00000554975 OR10J4P0C629 311 aa8.76□□□□□ -1.01
SHMT2-216ENST00000554975 TRGC1P0CF51 173 aa8.76□□□□□ -1.01
SHMT2-216ENST00000554975 DEFA4P12838 97 aa8.76□□□□□ -1.01
SHMT2-216ENST00000554975 GNG4P50150 75 aa8.76□□□□□ -1.01
SHMT2-216ENST00000554975 COA6Q5JTJ3 125 aaKnown RBP8.76□□□□□ -1.01
SHMT2-216ENST00000554975 C10orf113Q5VZT2 155 aa8.76□□□□□ -1.01
SHMT2-216ENST00000554975 CCDC144NLQ6NUI1 221 aa8.76□□□□□ -1.01
SHMT2-216ENST00000554975 TEX38Q6PEX7 206 aa8.76□□□□□ -1.01
SHMT2-216ENST00000554975 MIR17HGQ75NE6 70 aa8.76□□□□□ -1.01
SHMT2-216ENST00000554975 TMEM183AQ8IXX5 376 aa8.76□□□□□ -1.01
SHMT2-216ENST00000554975 SMIM12Q96EX1 92 aa8.76□□□□□ -1.01
SHMT2-216ENST00000554975 WWC2-AS2Q96NR7 200 aa8.76□□□□□ -1.01
SHMT2-216ENST00000554975 CHRDL1Q9BU40 450 aa8.76□□□□□ -1.01
SHMT2-216ENST00000554975 SEPSECSQ9HD40 501 aaKnown RBP8.76□□□□□ -1.01
SHMT2-216ENST00000554975 ZNRD1Q9P1U0 126 aa8.76□□□□□ -1.01
SHMT2-216ENST00000554975 YTHDF2Q9Y5A9 579 aaKnown RBP8.76□□□□□ -1.01
SHMT2-216ENST00000554975 IGLC7A0M8Q6 106 aa8.75□□□□□ -1.01
SHMT2-216ENST00000554975 SCGB2A1O75556 95 aa8.75□□□□□ -1.01
SHMT2-216ENST00000554975 CRYGCP07315 174 aa8.75□□□□□ -1.01
SHMT2-216ENST00000554975 MYOD1P15172 320 aa8.75□□□□□ -1.01
SHMT2-216ENST00000554975 HTR1DP28221 377 aa8.75□□□□□ -1.01
SHMT2-216ENST00000554975 CNN1P51911 297 aaKnown RBP8.75□□□□□ -1.01
SHMT2-216ENST00000554975 TAS2R60P59551 318 aa8.75□□□□□ -1.01
SHMT2-216ENST00000554975 WT1-ASQ06250 92 aa8.75□□□□□ -1.01
SHMT2-216ENST00000554975 TNXAQ16473 311 aa8.75□□□□□ -1.01
SHMT2-216ENST00000554975 ACTL10Q5JWF8 245 aa8.75□□□□□ -1.01
SHMT2-216ENST00000554975 MOB3BQ86TA1 216 aa8.75□□□□□ -1.01
SHMT2-216ENST00000554975 HIST3H2BBQ8N257 126 aa8.75□□□□□ -1.01
SHMT2-216ENST00000554975 PIP4P2Q8N4L2 257 aa8.75□□□□□ -1.01
SHMT2-216ENST00000554975 OR10W1Q8NGF6 305 aa8.75□□□□□ -1.01
SHMT2-216ENST00000554975 FRZBQ92765 325 aa8.75□□□□□ -1.01
SHMT2-216ENST00000554975 EAF1Q96JC9 268 aaPredicted RBP8.75□□□□□ -1.01
SHMT2-216ENST00000554975 SLC25A33Q9BSK2 321 aa8.75□□□□□ -1.01
SHMT2-216ENST00000554975 DNAJC4Q9NNZ3 241 aa8.75□□□□□ -1.01
SHMT2-216ENST00000554975 NPFFO15130 113 aa8.74□□□□□ -1.01
SHMT2-216ENST00000554975 MT-ND6P03923 174 aa8.74□□□□□ -1.01
SHMT2-216ENST00000554975 CRYGBP07316 175 aa8.74□□□□□ -1.01
SHMT2-216ENST00000554975 NPPCP23582 126 aa8.74□□□□□ -1.01
SHMT2-216ENST00000554975 COX7A1P24310 79 aa8.74□□□□□ -1.01
SHMT2-216ENST00000554975 PLGLAQ15195 96 aa8.74□□□□□ -1.01
SHMT2-216ENST00000554975 TPTE2P1Q5T6R2 138 aa8.74□□□□□ -1.01
SHMT2-216ENST00000554975 SPATA31B1PQ5VZV4 182 aa8.74□□□□□ -1.01
SHMT2-216ENST00000554975 C1orf122Q6ZSJ8 110 aa8.74□□□□□ -1.01
SHMT2-216ENST00000554975 PPP1R27Q86WC6 154 aa8.74□□□□□ -1.01
SHMT2-216ENST00000554975 C11orf42Q8N5U0 333 aa8.74□□□□□ -1.01
SHMT2-216ENST00000554975 NECAP1Q8NC96 275 aa8.74□□□□□ -1.01
SHMT2-216ENST00000554975 TMEM116Q8NCL8 245 aa8.74□□□□□ -1.01
SHMT2-216ENST00000554975 OR5AU1Q8NGC0 362 aa8.74□□□□□ -1.01
SHMT2-216ENST00000554975 OR11H6Q8NGC7 330 aa8.74□□□□□ -1.01
SHMT2-216ENST00000554975 CFHR4Q92496 578 aa8.74□□□□□ -1.01
SHMT2-216ENST00000554975 OR51M1Q9H341 326 aa8.74□□□□□ -1.01
SHMT2-216ENST00000554975 OSTCQ9NRP0 149 aa8.74□□□□□ -1.01
SHMT2-216ENST00000554975 IL36BQ9NZH7 164 aa8.74□□□□□ -1.01
SHMT2-216ENST00000554975 RNF24Q9Y225 148 aa8.74□□□□□ -1.01
SHMT2-216ENST00000554975 F11RQ9Y624 299 aaKnown RBP8.74□□□□□ -1.01
SHMT2-216ENST00000554975 IGKV1OR2-108A0A075B7D4 117 aa8.73□□□□□ -1.01
SHMT2-216ENST00000554975 PSMB11A5LHX3 300 aa8.73□□□□□ -1.01
SHMT2-216ENST00000554975 HELTA6NFD8 242 aa8.73□□□□□ -1.01
SHMT2-216ENST00000554975 SAA4P35542 130 aa8.73□□□□□ -1.01
SHMT2-216ENST00000554975 UBE2E1P51965 193 aa8.73□□□□□ -1.01
SHMT2-216ENST00000554975 PLP1P60201 277 aa8.73□□□□□ -1.01
SHMT2-216ENST00000554975 RPEL1Q2QD12 228 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms