RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 FAM71F2Q6NXP2 309 aa9.34□□□□□ -0.91
SHMT2-212ENST00000554467 OR4F17Q8NGA8 305 aa9.34□□□□□ -0.91
SHMT2-212ENST00000554467 VSTM2AQ8TAG5 236 aa9.34□□□□□ -0.91
SHMT2-212ENST00000554467 SAMD10Q9BYL1 202 aa9.34□□□□□ -0.91
SHMT2-212ENST00000554467 HES1Q14469 280 aa9.34□□□□□ -0.91
SHMT2-212ENST00000554467 SMIM15Q7Z3B0 74 aa9.34□□□□□ -0.91
SHMT2-212ENST00000554467 VMO1Q7Z5L0 202 aa9.34□□□□□ -0.91
SHMT2-212ENST00000554467 SFRP2Q96HF1 295 aa9.34□□□□□ -0.91
SHMT2-212ENST00000554467 NRN1Q9NPD7 142 aa9.34□□□□□ -0.91
SHMT2-212ENST00000554467 LOC102724200A0A096LPH7 203 aaPredicted RBP9.33□□□□□ -0.92
SHMT2-212ENST00000554467 OR10J4P0C629 311 aa9.33□□□□□ -0.92
SHMT2-212ENST00000554467 HTR1DP28221 377 aa9.33□□□□□ -0.92
SHMT2-212ENST00000554467 C2orf83Q53S99 150 aa9.33□□□□□ -0.92
SHMT2-212ENST00000554467 DYNAPQ8N1N2 210 aa9.33□□□□□ -0.92
SHMT2-212ENST00000554467 NRGNQ92686 78 aa9.33□□□□□ -0.92
SHMT2-212ENST00000554467 GNB4Q9HAV0 340 aa9.33□□□□□ -0.92
SHMT2-212ENST00000554467 SIGLEC9Q9Y336 463 aa9.33□□□□□ -0.92
SHMT2-212ENST00000554467 CSPG4Q6UVK1 2322 aa9.33□□□□□ -0.92
SHMT2-212ENST00000554467 MPDU1O75352 247 aa9.33□□□□□ -0.92
SHMT2-212ENST00000554467 MIR17HGQ75NE6 70 aa9.33□□□□□ -0.92
SHMT2-212ENST00000554467 BAGE3Q86Y29 109 aa9.33□□□□□ -0.92
SHMT2-212ENST00000554467 BAGE2Q86Y30 109 aa9.33□□□□□ -0.92
SHMT2-212ENST00000554467 OR7C2O60412 319 aa9.33□□□□□ -0.92
SHMT2-212ENST00000554467 PSG1P11464 419 aa9.33□□□□□ -0.92
SHMT2-212ENST00000554467 CD99P14209 185 aa9.33□□□□□ -0.92
SHMT2-212ENST00000554467 EFNA4P52798 201 aa9.33□□□□□ -0.92
SHMT2-212ENST00000554467 MFAP2P55001 183 aa9.33□□□□□ -0.92
SHMT2-212ENST00000554467 CD69Q07108 199 aa9.33□□□□□ -0.92
SHMT2-212ENST00000554467 NPIPB3Q92617 1050 aa9.33□□□□□ -0.92
SHMT2-212ENST00000554467 RPH3ALQ9UNE2 315 aa9.33□□□□□ -0.92
SHMT2-212ENST00000554467 IGLC7A0M8Q6 106 aa9.32□□□□□ -0.92
SHMT2-212ENST00000554467 LY6LH3BQJ8 138 aa9.32□□□□□ -0.92
SHMT2-212ENST00000554467 LINC00869P0C866 280 aa9.32□□□□□ -0.92
SHMT2-212ENST00000554467 LGALS7P47929 136 aa9.32□□□□□ -0.92
SHMT2-212ENST00000554467 ZNF90Q03938 601 aa9.32□□□□□ -0.92
SHMT2-212ENST00000554467 Q0VG73 95 aa9.32□□□□□ -0.92
SHMT2-212ENST00000554467 TNFRSF14Q92956 283 aa9.32□□□□□ -0.92
SHMT2-212ENST00000554467 NUDT11Q96G61 164 aa9.32□□□□□ -0.92
SHMT2-212ENST00000554467 A0A1W2PS18 150 aa9.32□□□□□ -0.92
SHMT2-212ENST00000554467 TMEM8BA6NDV4 472 aa9.32□□□□□ -0.92
SHMT2-212ENST00000554467 C3orf79P0CE67 100 aa9.32□□□□□ -0.92
SHMT2-212ENST00000554467 RPL27AP46776 148 aaKnown RBP9.32□□□□□ -0.92
SHMT2-212ENST00000554467 TCL1AP56279 114 aa9.32□□□□□ -0.92
SHMT2-212ENST00000554467 PPP1R27Q86WC6 154 aa9.32□□□□□ -0.92
SHMT2-212ENST00000554467 SIGLECL1Q8N7X8 197 aa9.32□□□□□ -0.92
SHMT2-212ENST00000554467 OR2D3Q8NGH3 330 aa9.32□□□□□ -0.92
SHMT2-212ENST00000554467 DPM3Q9P2X0 92 aa9.32□□□□□ -0.92
SHMT2-212ENST00000554467 TRAV30A0A087WSZ9 112 aa9.31□□□□□ -0.92
SHMT2-212ENST00000554467 FSTL3O95633 263 aa9.31□□□□□ -0.92
SHMT2-212ENST00000554467 IGHV4-39P01824 125 aa9.31□□□□□ -0.92
SHMT2-212ENST00000554467 RHOGP84095 191 aa9.31□□□□□ -0.92
SHMT2-212ENST00000554467 RAB31Q13636 194 aa9.31□□□□□ -0.92
SHMT2-212ENST00000554467 LCN12Q6JVE5 192 aa9.31□□□□□ -0.92
SHMT2-212ENST00000554467 NIT1Q86X76 327 aa9.31□□□□□ -0.92
SHMT2-212ENST00000554467 MRPS16Q9Y3D3 137 aaKnown RBP9.31□□□□□ -0.92
SHMT2-212ENST00000554467 AMMECR1Q9Y4X0 333 aaPredicted RBP9.31□□□□□ -0.92
SHMT2-212ENST00000554467 IGHV3OR16-10A0A075B7F0 116 aa9.31□□□□□ -0.92
SHMT2-212ENST00000554467 MOSP00540 346 aa9.31□□□□□ -0.92
SHMT2-212ENST00000554467 OR10G8Q8NGN5 311 aa9.31□□□□□ -0.92
SHMT2-212ENST00000554467 OCC1Q8TAD7 63 aa9.31□□□□□ -0.92
SHMT2-212ENST00000554467 YTHDF2Q9Y5A9 579 aaKnown RBP9.31□□□□□ -0.92
SHMT2-212ENST00000554467 PDE6DO43924 150 aa9.31□□□□□ -0.92
SHMT2-212ENST00000554467 CNIH1O95406 144 aa9.31□□□□□ -0.92
SHMT2-212ENST00000554467 RPL19P84098 196 aaKnown RBP9.31□□□□□ -0.92
SHMT2-212ENST00000554467 MORN5Q5VZ52 161 aa9.31□□□□□ -0.92
SHMT2-212ENST00000554467 SERTAD4Q9NUC0 356 aa9.31□□□□□ -0.92
SHMT2-212ENST00000554467 PRTN3P24158 256 aa9.3□□□□□ -0.92
SHMT2-212ENST00000554467 PRR20EP86478 221 aa9.3□□□□□ -0.92
SHMT2-212ENST00000554467 PRR20CP86479 221 aa9.3□□□□□ -0.92
SHMT2-212ENST00000554467 PRR20DP86480 221 aa9.3□□□□□ -0.92
SHMT2-212ENST00000554467 PRR20BP86481 221 aa9.3□□□□□ -0.92
SHMT2-212ENST00000554467 PRR20AP86496 221 aa9.3□□□□□ -0.92
SHMT2-212ENST00000554467 PRR31Q5SQ13 230 aa9.3□□□□□ -0.92
SHMT2-212ENST00000554467 C16orf54Q6UWD8 224 aa9.3□□□□□ -0.92
SHMT2-212ENST00000554467 MMD2Q8IY49 270 aa9.3□□□□□ -0.92
SHMT2-212ENST00000554467 NHLRC2Q8NBF2 726 aa9.3□□□□□ -0.92
SHMT2-212ENST00000554467 OR4A5Q8NH83 315 aa9.3□□□□□ -0.92
SHMT2-212ENST00000554467 S4R3C0 116 aa9.3□□□□□ -0.92
SHMT2-212ENST00000554467 TRAV5A0A0B4J249 113 aa9.3□□□□□ -0.92
SHMT2-212ENST00000554467 K7EN84 100 aa9.3□□□□□ -0.92
SHMT2-212ENST00000554467 RBP4P02753 201 aa9.3□□□□□ -0.92
SHMT2-212ENST00000554467 CRYGBP07316 175 aa9.3□□□□□ -0.92
SHMT2-212ENST00000554467 MGST1P10620 155 aaKnown RBP9.3□□□□□ -0.92
SHMT2-212ENST00000554467 IER3P46695 156 aa9.3□□□□□ -0.92
SHMT2-212ENST00000554467 FXYD3Q14802 87 aa9.3□□□□□ -0.92
SHMT2-212ENST00000554467 FAM19A2Q8N3H0 131 aa9.3□□□□□ -0.92
SHMT2-212ENST00000554467 TEX45Q8NA69 505 aa9.3□□□□□ -0.92
SHMT2-212ENST00000554467 SLC25A33Q9BSK2 321 aa9.3□□□□□ -0.92
SHMT2-212ENST00000554467 NAV2Q8IVL1 2488 aa9.3□□□□□ -0.92
SHMT2-212ENST00000554467 A1L4Q6 167 aa9.3□□□□□ -0.92
SHMT2-212ENST00000554467 CIDEAO60543 219 aa9.3□□□□□ -0.92
SHMT2-212ENST00000554467 ZNF253O75346 499 aa9.3□□□□□ -0.92
SHMT2-212ENST00000554467 KIAA1644Q3SXP7 199 aa9.3□□□□□ -0.92
SHMT2-212ENST00000554467 KLF17Q5JT82 389 aaPredicted RBP9.3□□□□□ -0.92
SHMT2-212ENST00000554467 OR11H6Q8NGC7 330 aa9.3□□□□□ -0.92
SHMT2-212ENST00000554467 ZC2HC1AQ96GY0 325 aa9.3□□□□□ -0.92
SHMT2-212ENST00000554467 TENM4Q6N022 2769 aa9.29□□□□□ -0.92
SHMT2-212ENST00000554467 NCBP2LA6PVI3 153 aaKnown RBP9.29□□□□□ -0.92
SHMT2-212ENST00000554467 CXorf1O96002 111 aa9.29□□□□□ -0.92
SHMT2-212ENST00000554467 STAG3L2P0CL84 134 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms