RNA–Protein interactions for RNA: ENST00000554350.5

ATXN3-226, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-226ENST00000554350 OR11H6Q8NGC7 330 aa4.24□□□□□ -1.73
ATXN3-226ENST00000554350 OR52L2PQ8NGH6 319 aa4.24□□□□□ -1.73
ATXN3-226ENST00000554350 OR1L1Q8NH94 360 aa4.24□□□□□ -1.73
ATXN3-226ENST00000554350 RXFP4Q8TDU9 374 aa4.24□□□□□ -1.73
ATXN3-226ENST00000554350 SFT2D1Q8WV19 159 aa4.24□□□□□ -1.73
ATXN3-226ENST00000554350 HIST1H2BAQ96A08 127 aa4.24□□□□□ -1.73
ATXN3-226ENST00000554350 TVP23CQ96ET8 276 aa4.24□□□□□ -1.73
ATXN3-226ENST00000554350 YPEL4Q96NS1 127 aa4.24□□□□□ -1.73
ATXN3-226ENST00000554350 TCEAL7Q9BRU2 100 aa4.24□□□□□ -1.73
ATXN3-226ENST00000554350 NIPSNAP3BQ9BS92 247 aa4.24□□□□□ -1.73
ATXN3-226ENST00000554350 CTDSP1Q9GZU7 261 aa4.24□□□□□ -1.73
ATXN3-226ENST00000554350 OR2D2Q9H210 308 aa4.24□□□□□ -1.73
ATXN3-226ENST00000554350 RBKSQ9H477 322 aa4.24□□□□□ -1.73
ATXN3-226ENST00000554350 GNB4Q9HAV0 340 aa4.24□□□□□ -1.73
ATXN3-226ENST00000554350 RPRMQ9NS64 109 aa4.24□□□□□ -1.73
ATXN3-226ENST00000554350 VAX2Q9UIW0 290 aa4.24□□□□□ -1.73
ATXN3-226ENST00000554350 IGKV1D-17A0A075B6S4 117 aa4.23□□□□□ -1.73
ATXN3-226ENST00000554350 CTXND1A0A1B0GTU2 59 aa4.23□□□□□ -1.73
ATXN3-226ENST00000554350 SMCO3A2RU48 225 aa4.23□□□□□ -1.73
ATXN3-226ENST00000554350 C5orf52A6NGY3 159 aa4.23□□□□□ -1.73
ATXN3-226ENST00000554350 ZNF729A6NN14 1252 aaPredicted RBP4.23□□□□□ -1.73
ATXN3-226ENST00000554350 H3BQ15 152 aa4.23□□□□□ -1.73
ATXN3-226ENST00000554350 M0R036 132 aa4.23□□□□□ -1.73
ATXN3-226ENST00000554350 CYB5BO43169 146 aa4.23□□□□□ -1.73
ATXN3-226ENST00000554350 NDUFB8O95169 186 aa4.23□□□□□ -1.73
ATXN3-226ENST00000554350 IFNA17P01571 189 aa4.23□□□□□ -1.73
ATXN3-226ENST00000554350 METTL15P1P0C7V9 234 aa4.23□□□□□ -1.73
ATXN3-226ENST00000554350 FAM106CPP0CH98 169 aa4.23□□□□□ -1.73
ATXN3-226ENST00000554350 BCL2P10415 239 aa4.23□□□□□ -1.73
ATXN3-226ENST00000554350 NQO2P16083 231 aa4.23□□□□□ -1.73
ATXN3-226ENST00000554350 BTF3P20290 206 aaKnown RBP4.23□□□□□ -1.73
ATXN3-226ENST00000554350 RAB5AP20339 215 aa4.23□□□□□ -1.73
ATXN3-226ENST00000554350 NFYBP25208 207 aa4.23□□□□□ -1.73
ATXN3-226ENST00000554350 PSMB3P49720 205 aa4.23□□□□□ -1.73
ATXN3-226ENST00000554350 RND2P52198 227 aa4.23□□□□□ -1.73
ATXN3-226ENST00000554350 RPL30P62888 115 aaKnown RBP4.23□□□□□ -1.73
ATXN3-226ENST00000554350 CCL20P78556 96 aa4.23□□□□□ -1.73
ATXN3-226ENST00000554350 DLK1P80370 383 aa4.23□□□□□ -1.73
ATXN3-226ENST00000554350 S100A12P80511 92 aa4.23□□□□□ -1.73
ATXN3-226ENST00000554350 MEF2CQ06413 473 aaPredicted RBP4.23□□□□□ -1.73
ATXN3-226ENST00000554350 SLC38A11Q08AI6 406 aa4.23□□□□□ -1.73
ATXN3-226ENST00000554350 ARL16Q0P5N6 197 aa4.23□□□□□ -1.73
ATXN3-226ENST00000554350 SPANXN5Q5MJ07 72 aa4.23□□□□□ -1.73
ATXN3-226ENST00000554350 FAM53AQ6NSI3 398 aaPredicted RBP4.23□□□□□ -1.73
ATXN3-226ENST00000554350 OR13A1Q8NGR1 328 aa4.23□□□□□ -1.73
ATXN3-226ENST00000554350 MRGPRDQ8TDS7 321 aa4.23□□□□□ -1.73
ATXN3-226ENST00000554350 DTD1Q8TEA8 209 aa4.23□□□□□ -1.73
ATXN3-226ENST00000554350 TCTEX1D2Q8WW35 142 aa4.23□□□□□ -1.73
ATXN3-226ENST00000554350 CLCC1Q96S66 551 aa4.23□□□□□ -1.73
ATXN3-226ENST00000554350 ELOVL1Q9BW60 279 aa4.23□□□□□ -1.73
ATXN3-226ENST00000554350 ACTR3CQ9C0K3 210 aaPredicted RBP4.23□□□□□ -1.73
ATXN3-226ENST00000554350 MANBALQ9NQG1 85 aa4.23□□□□□ -1.73
ATXN3-226ENST00000554350 KCNIP2Q9NS61 270 aa4.23□□□□□ -1.73
ATXN3-226ENST00000554350 SLC39A9Q9NUM3 307 aa4.23□□□□□ -1.73
ATXN3-226ENST00000554350 METTL1Q9UBP6 276 aaKnown RBP4.23□□□□□ -1.73
ATXN3-226ENST00000554350 WDR83OSQ9Y284 106 aa4.23□□□□□ -1.73
ATXN3-226ENST00000554350 FLG2Q5D862 2391 aaPredicted RBP4.22□□□□□ -1.73
ATXN3-226ENST00000554350 IGHV2-26A0A0B4J1V2 119 aa4.22□□□□□ -1.73
ATXN3-226ENST00000554350 TRAV39A0A0B4J263 110 aa4.22□□□□□ -1.73
ATXN3-226ENST00000554350 KBTBD11-OT1A0A1B0GTJ5 212 aa4.22□□□□□ -1.73
ATXN3-226ENST00000554350 C17orf98A8MV24 154 aa4.22□□□□□ -1.73
ATXN3-226ENST00000554350 INS-IGF2F8WCM5 200 aa4.22□□□□□ -1.73
ATXN3-226ENST00000554350 UBE2CO00762 179 aa4.22□□□□□ -1.73
ATXN3-226ENST00000554350 S1PR2O95136 353 aa4.22□□□□□ -1.73
ATXN3-226ENST00000554350 KRASP01116 189 aa4.22□□□□□ -1.73
ATXN3-226ENST00000554350 OR13C7P0DN81 318 aa4.22□□□□□ -1.73
ATXN3-226ENST00000554350 IAPPP10997 89 aa4.22□□□□□ -1.73
ATXN3-226ENST00000554350 TMEM11P17152 192 aa4.22□□□□□ -1.73
ATXN3-226ENST00000554350 G6PCP35575 357 aa4.22□□□□□ -1.73
ATXN3-226ENST00000554350 GPR12P47775 334 aa4.22□□□□□ -1.73
ATXN3-226ENST00000554350 OR2B8PP59922 312 aa4.22□□□□□ -1.73
ATXN3-226ENST00000554350 ERVK-16P61578 105 aa4.22□□□□□ -1.73
ATXN3-226ENST00000554350 RUNX1Q01196 453 aa4.22□□□□□ -1.73
ATXN3-226ENST00000554350 HNF4GQ14541 408 aa4.22□□□□□ -1.73
ATXN3-226ENST00000554350 ACOT6Q3I5F7 207 aaPredicted RBP4.22□□□□□ -1.73
ATXN3-226ENST00000554350 FAM90A2PQ658T7 463 aa4.22□□□□□ -1.73
ATXN3-226ENST00000554350 FAM71F2Q6NXP2 309 aa4.22□□□□□ -1.73
ATXN3-226ENST00000554350 HEPN1Q6WQI6 88 aa4.22□□□□□ -1.73
ATXN3-226ENST00000554350 C5orf56Q8N8D9 126 aa4.22□□□□□ -1.73
ATXN3-226ENST00000554350 ZNF709Q8N972 641 aa4.22□□□□□ -1.73
ATXN3-226ENST00000554350 C8orf31Q8N9H6 132 aa4.22□□□□□ -1.73
ATXN3-226ENST00000554350 OR4S2Q8NH73 311 aa4.22□□□□□ -1.73
ATXN3-226ENST00000554350 C5orf30Q96GV9 206 aa4.22□□□□□ -1.73
ATXN3-226ENST00000554350 BTF3L4Q96K17 158 aa4.22□□□□□ -1.73
ATXN3-226ENST00000554350 S1PR3Q99500 378 aa4.22□□□□□ -1.73
ATXN3-226ENST00000554350 RARRES2Q99969 163 aa4.22□□□□□ -1.73
ATXN3-226ENST00000554350 ABHD14AQ9BUJ0 271 aa4.22□□□□□ -1.73
ATXN3-226ENST00000554350 CLEC7AQ9BXN2 247 aa4.22□□□□□ -1.73
ATXN3-226ENST00000554350 PARP12Q9H0J9 701 aaKnown RBP4.22□□□□□ -1.73
ATXN3-226ENST00000554350 SRD5A3Q9H8P0 318 aa4.22□□□□□ -1.73
ATXN3-226ENST00000554350 SDF2L1Q9HCN8 221 aa4.22□□□□□ -1.73
ATXN3-226ENST00000554350 CALYQ9NYX4 217 aa4.22□□□□□ -1.73
ATXN3-226ENST00000554350 DPM3Q9P2X0 92 aa4.22□□□□□ -1.73
ATXN3-226ENST00000554350 GNG12Q9UBI6 72 aa4.22□□□□□ -1.73
ATXN3-226ENST00000554350 PSG11Q9UQ72 335 aa4.22□□□□□ -1.73
ATXN3-226ENST00000554350 ZNF257Q9Y2Q1 563 aa4.22□□□□□ -1.73
ATXN3-226ENST00000554350 TRBV24-1A0A075B6N3 115 aa4.21□□□□□ -1.74
ATXN3-226ENST00000554350 TRGV10A0A0A0MS01 117 aa4.21□□□□□ -1.74
ATXN3-226ENST00000554350 hADV38S2A0JD32 116 aa4.21□□□□□ -1.74
ATXN3-226ENST00000554350 MAP1LC3B2A6NCE7 125 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms