RNA–Protein interactions for RNA: ENST00000553801.1

SYNE2-211, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-211ENST00000553801 GABARAPO95166 117 aa12.48□□□□□ -0.41
SYNE2-211ENST00000553801 GPX4P36969 197 aaPredicted RBP12.48□□□□□ -0.41
SYNE2-211ENST00000553801 MEOX2P50222 304 aa12.48□□□□□ -0.41
SYNE2-211ENST00000553801 ATP5IP56385 69 aaPredicted RBP12.48□□□□□ -0.41
SYNE2-211ENST00000553801 LYZP61626 148 aa12.48□□□□□ -0.41
SYNE2-211ENST00000553801 VBP1P61758 197 aa12.48□□□□□ -0.41
SYNE2-211ENST00000553801 SURF2Q15527 256 aaPredicted RBP12.48□□□□□ -0.41
SYNE2-211ENST00000553801 LGI3Q8N145 548 aa12.48□□□□□ -0.41
SYNE2-211ENST00000553801 Q8N1X5 172 aa12.48□□□□□ -0.41
SYNE2-211ENST00000553801 ZNRF2Q8NHG8 242 aa12.48□□□□□ -0.41
SYNE2-211ENST00000553801 SLC35E1Q96K37 410 aa12.48□□□□□ -0.41
SYNE2-211ENST00000553801 DOK5Q9P104 306 aa12.48□□□□□ -0.41
SYNE2-211ENST00000553801 TMEM56-RWDD3S4R434 201 aa12.48□□□□□ -0.41
SYNE2-211ENST00000553801 CCL18P55774 89 aa12.47□□□□□ -0.41
SYNE2-211ENST00000553801 B2MP61769 119 aa12.47□□□□□ -0.41
SYNE2-211ENST00000553801 ZNF90Q03938 601 aa12.47□□□□□ -0.41
SYNE2-211ENST00000553801 GPR107Q5VW38 600 aa12.47□□□□□ -0.41
SYNE2-211ENST00000553801 AP3S1Q92572 193 aa12.47□□□□□ -0.41
SYNE2-211ENST00000553801 C16orf92Q96LL3 132 aa12.47□□□□□ -0.41
SYNE2-211ENST00000553801 EXTL2Q9UBQ6 330 aa12.47□□□□□ -0.41
SYNE2-211ENST00000553801 CRYM-AS1A6NIL9 109 aa12.46□□□□□ -0.41
SYNE2-211ENST00000553801 NUDT3O95989 172 aa12.46□□□□□ -0.41
SYNE2-211ENST00000553801 SSBP1Q04837 148 aaKnown RBP12.46□□□□□ -0.41
SYNE2-211ENST00000553801 GAMTQ14353 236 aa12.46□□□□□ -0.41
SYNE2-211ENST00000553801 DTD1Q8TEA8 209 aa12.46□□□□□ -0.41
SYNE2-211ENST00000553801 IL22RA2Q969J5 263 aa12.46□□□□□ -0.41
SYNE2-211ENST00000553801 KCNIP3Q9Y2W7 256 aa12.46□□□□□ -0.41
SYNE2-211ENST00000553801 IGKV1D-37A0A075B6S9 117 aa12.45□□□□□ -0.42
SYNE2-211ENST00000553801 A8MTW9 85 aa12.45□□□□□ -0.42
SYNE2-211ENST00000553801 DISC1C4P0D8 188 aa12.45□□□□□ -0.42
SYNE2-211ENST00000553801 F5H768 121 aa12.45□□□□□ -0.42
SYNE2-211ENST00000553801 DEFB130BP0DP73 79 aa12.45□□□□□ -0.42
SYNE2-211ENST00000553801 DEFB130AP0DP74 79 aa12.45□□□□□ -0.42
SYNE2-211ENST00000553801 GALR1P47211 349 aa12.45□□□□□ -0.42
SYNE2-211ENST00000553801 CCR6P51684 374 aa12.45□□□□□ -0.42
SYNE2-211ENST00000553801 FUNDC2Q9BWH2 189 aa12.45□□□□□ -0.42
SYNE2-211ENST00000553801 HSPB7Q9UBY9 170 aa12.45□□□□□ -0.42
SYNE2-211ENST00000553801 GPR132Q9UNW8 380 aa12.45□□□□□ -0.42
SYNE2-211ENST00000553801 ZNF705GA8MUZ8 300 aaPredicted RBP12.44□□□□□ -0.42
SYNE2-211ENST00000553801 DUSP14O95147 198 aaKnown RBP12.44□□□□□ -0.42
SYNE2-211ENST00000553801 INSP01308 110 aa12.44□□□□□ -0.42
SYNE2-211ENST00000553801 OR2F1Q13607 317 aa12.44□□□□□ -0.42
SYNE2-211ENST00000553801 AMTNQ6UX39 209 aa12.44□□□□□ -0.42
SYNE2-211ENST00000553801 TRGV9Q99603 122 aa12.44□□□□□ -0.42
SYNE2-211ENST00000553801 RBKSQ9H477 322 aa12.44□□□□□ -0.42
SYNE2-211ENST00000553801 SCRT2Q9NQ03 307 aa12.44□□□□□ -0.42
SYNE2-211ENST00000553801 CFDP00746 253 aaPredicted RBP12.43□□□□□ -0.42
SYNE2-211ENST00000553801 ATP5G1P05496 136 aa12.43□□□□□ -0.42
SYNE2-211ENST00000553801 TSPOP30536 169 aa12.43□□□□□ -0.42
SYNE2-211ENST00000553801 ATP5G3P48201 142 aa12.43□□□□□ -0.42
SYNE2-211ENST00000553801 SMCO1Q147U7 214 aa12.43□□□□□ -0.42
SYNE2-211ENST00000553801 OR4C16Q8NGL9 310 aa12.43□□□□□ -0.42
SYNE2-211ENST00000553801 C20orf173Q96LM9 149 aa12.43□□□□□ -0.42
SYNE2-211ENST00000553801 ZNF182P17025 639 aaPredicted RBP12.42□□□□□ -0.42
SYNE2-211ENST00000553801 S100A7P31151 101 aa12.42□□□□□ -0.42
SYNE2-211ENST00000553801 RAB11AP62491 216 aa12.42□□□□□ -0.42
SYNE2-211ENST00000553801 MRPS10P82664 201 aaKnown RBP12.42□□□□□ -0.42
SYNE2-211ENST00000553801 CLINT1Q14677 625 aa12.42□□□□□ -0.42
SYNE2-211ENST00000553801 GGNBP1Q5YKI7 109 aa12.42□□□□□ -0.42
SYNE2-211ENST00000553801 FAAP20Q6NZ36 180 aa12.42□□□□□ -0.42
SYNE2-211ENST00000553801 GPR141Q7Z602 305 aa12.42□□□□□ -0.42
SYNE2-211ENST00000553801 SPATA12Q7Z6I5 190 aa12.42□□□□□ -0.42
SYNE2-211ENST00000553801 RSG1Q9BU20 258 aa12.42□□□□□ -0.42
SYNE2-211ENST00000553801 SLC45A2Q9UMX9 530 aa12.42□□□□□ -0.42
SYNE2-211ENST00000553801 LINC00588Q9Y4M8 146 aa12.42□□□□□ -0.42
SYNE2-211ENST00000553801 A0A0B4J2A0 478 aa12.41□□□□□ -0.42
SYNE2-211ENST00000553801 CBY3A6NI87 242 aa12.41□□□□□ -0.42
SYNE2-211ENST00000553801 SPINK13Q1W4C9 94 aa12.41□□□□□ -0.42
SYNE2-211ENST00000553801 OR11H7Q8NGC8 314 aa12.41□□□□□ -0.42
SYNE2-211ENST00000553801 GPR82Q96P67 336 aa12.41□□□□□ -0.42
SYNE2-211ENST00000553801 PRRT1Q99946 306 aa12.41□□□□□ -0.42
SYNE2-211ENST00000553801 SLC25A22Q9H936 323 aa12.41□□□□□ -0.42
SYNE2-211ENST00000553801 SHPKQ9UHJ6 478 aa12.41□□□□□ -0.42
SYNE2-211ENST00000553801 M0R2Z0 102 aa12.4□□□□□ -0.42
SYNE2-211ENST00000553801 CRXO43186 299 aaPredicted RBP12.4□□□□□ -0.42
SYNE2-211ENST00000553801 PRM2P04554 102 aa12.4□□□□□ -0.42
SYNE2-211ENST00000553801 AKAIN1P0CW23 69 aa12.4□□□□□ -0.42
SYNE2-211ENST00000553801 CNN1P51911 297 aaKnown RBP12.4□□□□□ -0.42
SYNE2-211ENST00000553801 OR4D5Q8NGN0 318 aa12.4□□□□□ -0.42
SYNE2-211ENST00000553801 OR1B1Q8NGR6 318 aa12.4□□□□□ -0.42
SYNE2-211ENST00000553801 OR1S1Q8NH92 325 aa12.4□□□□□ -0.42
SYNE2-211ENST00000553801 SCGB3A2Q96PL1 93 aa12.4□□□□□ -0.42
SYNE2-211ENST00000553801 SLC25A32Q9H2D1 315 aa12.4□□□□□ -0.42
SYNE2-211ENST00000553801 PIGBOS1A0A0B4J2F0 54 aa12.39□□□□□ -0.43
SYNE2-211ENST00000553801 ZNF98A6NK75 572 aa12.39□□□□□ -0.43
SYNE2-211ENST00000553801 AKR1C4P17516 323 aa12.39□□□□□ -0.43
SYNE2-211ENST00000553801 TTC32Q5I0X7 151 aa12.39□□□□□ -0.43
SYNE2-211ENST00000553801 SSX7Q7RTT5 188 aa12.39□□□□□ -0.43
SYNE2-211ENST00000553801 THAP8Q8NA92 274 aa12.39□□□□□ -0.43
SYNE2-211ENST00000553801 Q9H8V8 135 aa12.39□□□□□ -0.43
SYNE2-211ENST00000553801 DNAH5Q8TE73 4624 aa12.38□□□□□ -0.43
SYNE2-211ENST00000553801 SRPXP78539 464 aa12.38□□□□□ -0.43
SYNE2-211ENST00000553801 FCN2Q15485 313 aa12.38□□□□□ -0.43
SYNE2-211ENST00000553801 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.38□□□□□ -0.43
SYNE2-211ENST00000553801 LYZL2Q7Z4W2 148 aa12.38□□□□□ -0.43
SYNE2-211ENST00000553801 TMEM256Q8N2U0 113 aa12.38□□□□□ -0.43
SYNE2-211ENST00000553801 RNF141Q8WVD5 230 aa12.38□□□□□ -0.43
SYNE2-211ENST00000553801 LINC01587Q99440 93 aa12.38□□□□□ -0.43
SYNE2-211ENST00000553801 PRR13Q9NZ81 148 aa12.38□□□□□ -0.43
SYNE2-211ENST00000553801 APOBP04114 4563 aaKnown RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms