RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 NUPR2A6NF83 97 aa13.19□□□□□ -0.3
SHMT2-206ENST00000553529 A6NHS1 94 aa13.19□□□□□ -0.3
SHMT2-206ENST00000553529 H3BMM0 161 aa13.19□□□□□ -0.3
SHMT2-206ENST00000553529 MED6O75586 246 aa13.19□□□□□ -0.3
SHMT2-206ENST00000553529 AKR1C1Q04828 323 aa13.19□□□□□ -0.3
SHMT2-206ENST00000553529 ARL16Q0P5N6 197 aa13.19□□□□□ -0.3
SHMT2-206ENST00000553529 COQ8AQ8NI60 647 aa13.19□□□□□ -0.3
SHMT2-206ENST00000553529 C11orf45Q8TAV5 145 aa13.19□□□□□ -0.3
SHMT2-206ENST00000553529 SCRT1Q9BWW7 348 aa13.19□□□□□ -0.3
SHMT2-206ENST00000553529 C11orf68Q9H3H3 251 aaKnown RBP13.19□□□□□ -0.3
SHMT2-206ENST00000553529 SLC25A22Q9H936 323 aa13.19□□□□□ -0.3
SHMT2-206ENST00000553529 RCL1Q9Y2P8 373 aaKnown RBP13.19□□□□□ -0.3
SHMT2-206ENST00000553529 DEDDO75618 318 aa13.18□□□□□ -0.3
SHMT2-206ENST00000553529 METTL15P1P0C7V9 234 aa13.18□□□□□ -0.3
SHMT2-206ENST00000553529 ORM2P19652 201 aa13.18□□□□□ -0.3
SHMT2-206ENST00000553529 NKX2-1P43699 371 aaPredicted RBP13.18□□□□□ -0.3
SHMT2-206ENST00000553529 PPP1R14BQ96C90 147 aa13.18□□□□□ -0.3
SHMT2-206ENST00000553529 STRAPQ9Y3F4 350 aaKnown RBP13.18□□□□□ -0.3
SHMT2-206ENST00000553529 BIRC6Q9NR09 4857 aa13.18□□□□□ -0.3
SHMT2-206ENST00000553529 SNRPGP15A8MWD9 76 aa13.17□□□□□ -0.3
SHMT2-206ENST00000553529 LYRM1O43325 122 aa13.17□□□□□ -0.3
SHMT2-206ENST00000553529 AP2S1P53680 142 aaPredicted RBP13.17□□□□□ -0.3
SHMT2-206ENST00000553529 ATP5IP56385 69 aaPredicted RBP13.17□□□□□ -0.3
SHMT2-206ENST00000553529 IAH1Q2TAA2 248 aaPredicted RBP13.17□□□□□ -0.3
SHMT2-206ENST00000553529 RPP25LQ8N5L8 163 aaKnown RBP13.17□□□□□ -0.3
SHMT2-206ENST00000553529 ZBTB8BQ8NAP8 495 aaPredicted RBP13.17□□□□□ -0.3
SHMT2-206ENST00000553529 OR1B1Q8NGR6 318 aa13.17□□□□□ -0.3
SHMT2-206ENST00000553529 CIB3Q96Q77 187 aaPredicted RBP13.17□□□□□ -0.3
SHMT2-206ENST00000553529 GSKIPQ9P0R6 139 aa13.17□□□□□ -0.3
SHMT2-206ENST00000553529 ZNF705EA8MWA4 302 aaPredicted RBP13.16□□□□□ -0.3
SHMT2-206ENST00000553529 SPP1P10451 314 aa13.16□□□□□ -0.3
SHMT2-206ENST00000553529 UHRF2Q96PU4 802 aa13.16□□□□□ -0.3
SHMT2-206ENST00000553529 SLC35B3Q9H1N7 401 aa13.16□□□□□ -0.3
SHMT2-206ENST00000553529 MBPP02686 304 aaPredicted RBP13.15□□□□□ -0.3
SHMT2-206ENST00000553529 SNRPCP09234 159 aaKnown RBP13.15□□□□□ -0.3
SHMT2-206ENST00000553529 ZNF705DP0CH99 300 aaPredicted RBP13.15□□□□□ -0.3
SHMT2-206ENST00000553529 ZNF705BP0CI00 300 aaPredicted RBP13.15□□□□□ -0.3
SHMT2-206ENST00000553529 HLA-DRB4P13762 266 aa13.15□□□□□ -0.3
SHMT2-206ENST00000553529 ATF4P18848 351 aaPredicted RBP13.15□□□□□ -0.3
SHMT2-206ENST00000553529 SNRPD3P62318 126 aaKnown RBP13.15□□□□□ -0.3
SHMT2-206ENST00000553529 MORN3Q6PF18 240 aaPredicted RBP13.15□□□□□ -0.3
SHMT2-206ENST00000553529 TMEM14EPQ6UXP3 125 aa13.15□□□□□ -0.3
SHMT2-206ENST00000553529 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.15□□□□□ -0.3
SHMT2-206ENST00000553529 OR8I2Q8N0Y5 310 aa13.15□□□□□ -0.3
SHMT2-206ENST00000553529 MITD1Q8WV92 249 aa13.15□□□□□ -0.3
SHMT2-206ENST00000553529 NUDT15Q9NV35 164 aa13.15□□□□□ -0.3
SHMT2-206ENST00000553529 TBC1D24Q9ULP9 559 aa13.15□□□□□ -0.3
SHMT2-206ENST00000553529 HLA-DRB4X5D2U9 266 aa13.15□□□□□ -0.3
SHMT2-206ENST00000553529 KMT2AQ03164 3969 aa13.15□□□□□ -0.3
SHMT2-206ENST00000553529 ZNF98A6NK75 572 aa13.14□□□□□ -0.31
SHMT2-206ENST00000553529 CENPXA8MT69 81 aa13.14□□□□□ -0.31
SHMT2-206ENST00000553529 IFNA21P01568 189 aa13.14□□□□□ -0.31
SHMT2-206ENST00000553529 TCRBP04435 133 aa13.14□□□□□ -0.31
SHMT2-206ENST00000553529 HLA-DMBP28068 263 aa13.14□□□□□ -0.31
SHMT2-206ENST00000553529 PRR20EP86478 221 aa13.14□□□□□ -0.31
SHMT2-206ENST00000553529 PRR20CP86479 221 aa13.14□□□□□ -0.31
SHMT2-206ENST00000553529 PRR20DP86480 221 aa13.14□□□□□ -0.31
SHMT2-206ENST00000553529 PRR20BP86481 221 aa13.14□□□□□ -0.31
SHMT2-206ENST00000553529 PRR20AP86496 221 aa13.14□□□□□ -0.31
SHMT2-206ENST00000553529 SLC38A11Q08AI6 406 aa13.14□□□□□ -0.31
SHMT2-206ENST00000553529 CYP2G1PQ6ZSU1 146 aa13.14□□□□□ -0.31
SHMT2-206ENST00000553529 Q6ZTC4 211 aa13.14□□□□□ -0.31
SHMT2-206ENST00000553529 RNF182Q8N6D2 247 aa13.14□□□□□ -0.31
SHMT2-206ENST00000553529 TMEM217Q8N7C4 229 aa13.14□□□□□ -0.31
SHMT2-206ENST00000553529 ZNF709Q8N972 641 aa13.14□□□□□ -0.31
SHMT2-206ENST00000553529 SMIM8Q96KF7 97 aa13.14□□□□□ -0.31
SHMT2-206ENST00000553529 C7orf50Q9BRJ6 194 aaKnown RBP13.14□□□□□ -0.31
SHMT2-206ENST00000553529 RSG1Q9BU20 258 aa13.14□□□□□ -0.31
SHMT2-206ENST00000553529 IGHV3OR16-12A0A075B7B8 117 aa13.13□□□□□ -0.31
SHMT2-206ENST00000553529 TRAV8-2A0A0B4J237 113 aa13.13□□□□□ -0.31
SHMT2-206ENST00000553529 PRM2P04554 102 aa13.13□□□□□ -0.31
SHMT2-206ENST00000553529 RPP30P78346 268 aaKnown RBP13.13□□□□□ -0.31
SHMT2-206ENST00000553529 OR4B1Q8NGF8 309 aa13.13□□□□□ -0.31
SHMT2-206ENST00000553529 SAV1Q9H4B6 383 aaPredicted RBP13.13□□□□□ -0.31
SHMT2-206ENST00000553529 VPS13DQ5THJ4 4388 aa13.12□□□□□ -0.31
SHMT2-206ENST00000553529 C7orf66A4D0T2 115 aa13.12□□□□□ -0.31
SHMT2-206ENST00000553529 FAM25EA8MYX2 175 aa13.12□□□□□ -0.31
SHMT2-206ENST00000553529 H3BRN7 92 aa13.12□□□□□ -0.31
SHMT2-206ENST00000553529 CNPY1Q3B7I2 92 aa13.12□□□□□ -0.31
SHMT2-206ENST00000553529 PATE2Q6UY27 113 aa13.12□□□□□ -0.31
SHMT2-206ENST00000553529 TMEM144Q7Z5S9 345 aa13.12□□□□□ -0.31
SHMT2-206ENST00000553529 PLA2G2EQ9NZK7 142 aa13.12□□□□□ -0.31
SHMT2-206ENST00000553529 LSM5Q9Y4Y9 91 aaKnown RBP13.12□□□□□ -0.31
SHMT2-206ENST00000553529 PIGBOS1A0A0B4J2F0 54 aa13.11□□□□□ -0.31
SHMT2-206ENST00000553529 FABP1P07148 127 aa13.11□□□□□ -0.31
SHMT2-206ENST00000553529 LINC00869P0C866 280 aa13.11□□□□□ -0.31
SHMT2-206ENST00000553529 PSMB3P49720 205 aa13.11□□□□□ -0.31
SHMT2-206ENST00000553529 C1orf194Q5T5A4 169 aa13.11□□□□□ -0.31
SHMT2-206ENST00000553529 FAM78BQ5VT40 261 aa13.11□□□□□ -0.31
SHMT2-206ENST00000553529 MORN5Q5VZ52 161 aa13.11□□□□□ -0.31
SHMT2-206ENST00000553529 BPIFCQ8NFQ6 507 aa13.11□□□□□ -0.31
SHMT2-206ENST00000553529 SLC25A39Q9BZJ4 359 aaPredicted RBP13.11□□□□□ -0.31
SHMT2-206ENST00000553529 C11orf1Q9H5F2 150 aa13.11□□□□□ -0.31
SHMT2-206ENST00000553529 KLK5Q9Y337 293 aaPredicted RBP13.11□□□□□ -0.31
SHMT2-206ENST00000553529 IL5P05113 134 aa13.1□□□□□ -0.31
SHMT2-206ENST00000553529 MIFP14174 115 aa13.1□□□□□ -0.31
SHMT2-206ENST00000553529 IFITM3Q01628 133 aa13.1□□□□□ -0.31
SHMT2-206ENST00000553529 FGL1Q08830 312 aa13.1□□□□□ -0.31
SHMT2-206ENST00000553529 C16orf92Q96LL3 132 aa13.1□□□□□ -0.31
SHMT2-206ENST00000553529 TMEM147Q9BVK8 224 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms