RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 HNRNPCP07910 306 aaKnown RBP eCLIP8.64□□□□□ -1.03
TMEM116-218ENST00000552839 OR5G3P0C626 314 aa8.64□□□□□ -1.03
TMEM116-218ENST00000552839 ORM2P19652 201 aa8.64□□□□□ -1.03
TMEM116-218ENST00000552839 NPPCP23582 126 aa8.64□□□□□ -1.03
TMEM116-218ENST00000552839 EIF2B2P49770 351 aaKnown RBP8.64□□□□□ -1.03
TMEM116-218ENST00000552839 ELLP55199 621 aaPredicted RBP8.64□□□□□ -1.03
TMEM116-218ENST00000552839 B2MP61769 119 aa8.64□□□□□ -1.03
TMEM116-218ENST00000552839 UNQ9165/PRO28630Q6UXU0 137 aa8.64□□□□□ -1.03
TMEM116-218ENST00000552839 ADAMTSL5Q6ZMM2 481 aa8.64□□□□□ -1.03
TMEM116-218ENST00000552839 ARPC5LQ9BPX5 153 aa8.64□□□□□ -1.03
TMEM116-218ENST00000552839 ARL6Q9H0F7 186 aa8.64□□□□□ -1.03
TMEM116-218ENST00000552839 DOK5Q9P104 306 aa8.64□□□□□ -1.03
TMEM116-218ENST00000552839 DNAH1Q9P2D7 4330 aa8.63□□□□□ -1.03
TMEM116-218ENST00000552839 RNF222A6NCQ9 220 aa8.63□□□□□ -1.03
TMEM116-218ENST00000552839 A8MWP6 167 aa8.63□□□□□ -1.03
TMEM116-218ENST00000552839 EIF5AP63241 154 aaKnown RBP8.63□□□□□ -1.03
TMEM116-218ENST00000552839 ZNF345Q14585 488 aa8.63□□□□□ -1.03
TMEM116-218ENST00000552839 VWC2Q2TAL6 325 aa8.63□□□□□ -1.03
TMEM116-218ENST00000552839 TM4SF20Q53R12 229 aa8.63□□□□□ -1.03
TMEM116-218ENST00000552839 HSD17B11Q8NBQ5 300 aa8.63□□□□□ -1.03
TMEM116-218ENST00000552839 OR1L4Q8NGR5 311 aa8.63□□□□□ -1.03
TMEM116-218ENST00000552839 PFDN5Q99471 154 aa8.63□□□□□ -1.03
TMEM116-218ENST00000552839 MGST2Q99735 147 aa8.63□□□□□ -1.03
TMEM116-218ENST00000552839 ZNF471Q9BX82 626 aaPredicted RBP8.63□□□□□ -1.03
TMEM116-218ENST00000552839 NPCDR1Q9BY65 106 aa8.63□□□□□ -1.03
TMEM116-218ENST00000552839 WDR61Q9GZS3 305 aaKnown RBP8.63□□□□□ -1.03
TMEM116-218ENST00000552839 ZMAT4Q9H898 229 aa8.63□□□□□ -1.03
TMEM116-218ENST00000552839 MRPL27Q9P0M9 148 aaKnown RBP8.63□□□□□ -1.03
TMEM116-218ENST00000552839 RNF24Q9Y225 148 aa8.63□□□□□ -1.03
TMEM116-218ENST00000552839 HIGD1AQ9Y241 93 aa8.63□□□□□ -1.03
TMEM116-218ENST00000552839 PXMP4Q9Y6I8 212 aa8.63□□□□□ -1.03
TMEM116-218ENST00000552839 HYDINQ4G0P3 5121 aa8.62□□□□□ -1.03
TMEM116-218ENST00000552839 IGKV1D-37A0A075B6S9 117 aa8.62□□□□□ -1.03
TMEM116-218ENST00000552839 IGKV1OR2-108A0A075B7D4 117 aa8.62□□□□□ -1.03
TMEM116-218ENST00000552839 IGHV3OR16-13A0A075B7E8 117 aa8.62□□□□□ -1.03
TMEM116-218ENST00000552839 IGHV3-49A0A0A0MS15 119 aa8.62□□□□□ -1.03
TMEM116-218ENST00000552839 IGHV3-74A0A0B4J1X5 117 aa8.62□□□□□ -1.03
TMEM116-218ENST00000552839 IGHV7-4-1A0A0J9YVY3 117 aa8.62□□□□□ -1.03
TMEM116-218ENST00000552839 C2orf70A6NJV1 201 aa8.62□□□□□ -1.03
TMEM116-218ENST00000552839 G3V3Q6 166 aa8.62□□□□□ -1.03
TMEM116-218ENST00000552839 K7EMT4 169 aa8.62□□□□□ -1.03
TMEM116-218ENST00000552839 BCL2L11O43521 198 aa8.62□□□□□ -1.03
TMEM116-218ENST00000552839 HYPMO75409 117 aa8.62□□□□□ -1.03
TMEM116-218ENST00000552839 FRMD6-AS1P0C7T7 363 aa8.62□□□□□ -1.03
TMEM116-218ENST00000552839 FOLR2P14207 255 aa8.62□□□□□ -1.03
TMEM116-218ENST00000552839 GATA2P23769 480 aaPredicted RBP8.62□□□□□ -1.03
TMEM116-218ENST00000552839 INSL3P51460 131 aa8.62□□□□□ -1.03
TMEM116-218ENST00000552839 RPL11P62913 178 aaKnown RBP8.62□□□□□ -1.03
TMEM116-218ENST00000552839 PXDC1Q5TGL8 231 aa8.62□□□□□ -1.03
TMEM116-218ENST00000552839 MIC13Q5XKP0 118 aa8.62□□□□□ -1.03
TMEM116-218ENST00000552839 LAMTOR1Q6IAA8 161 aa8.62□□□□□ -1.03
TMEM116-218ENST00000552839 RBPMS2Q6ZRY4 209 aaKnown RBP8.62□□□□□ -1.03
TMEM116-218ENST00000552839 STPG3Q8N7X2 389 aa8.62□□□□□ -1.03
TMEM116-218ENST00000552839 GGTLC1Q9BX51 225 aa8.62□□□□□ -1.03
TMEM116-218ENST00000552839 ZFAND3Q9H8U3 227 aa8.62□□□□□ -1.03
TMEM116-218ENST00000552839 STARD9Q9P2P6 4700 aa8.62□□□□□ -1.03
TMEM116-218ENST00000552839 CSMD3Q7Z407 3707 aa8.62□□□□□ -1.03
TMEM116-218ENST00000552839 IGHV3-66A0A0C4DH42 116 aa8.61□□□□□ -1.03
TMEM116-218ENST00000552839 TMEM213A2RRL7 107 aa8.61□□□□□ -1.03
TMEM116-218ENST00000552839 JTBO76095 146 aa8.61□□□□□ -1.03
TMEM116-218ENST00000552839 OPCMLQ14982 345 aa8.61□□□□□ -1.03
TMEM116-218ENST00000552839 FFAR4Q5NUL3 377 aa8.61□□□□□ -1.03
TMEM116-218ENST00000552839 C10orf113Q5VZT2 155 aa8.61□□□□□ -1.03
TMEM116-218ENST00000552839 LCN12Q6JVE5 192 aa8.61□□□□□ -1.03
TMEM116-218ENST00000552839 KCNRGQ8N5I3 272 aa8.61□□□□□ -1.03
TMEM116-218ENST00000552839 OR11H4Q8NGC9 324 aa8.61□□□□□ -1.03
TMEM116-218ENST00000552839 GNPNAT1Q96EK6 184 aaPredicted RBP8.61□□□□□ -1.03
TMEM116-218ENST00000552839 RSG1Q9BU20 258 aa8.61□□□□□ -1.03
TMEM116-218ENST00000552839 RHPN1-AS1Q9BWJ2 59 aa8.61□□□□□ -1.03
TMEM116-218ENST00000552839 SLC25A22Q9H936 323 aa8.61□□□□□ -1.03
TMEM116-218ENST00000552839 TECRQ9NZ01 308 aaKnown RBP8.61□□□□□ -1.03
TMEM116-218ENST00000552839 CSN3P07498 182 aa8.6□□□□□ -1.03
TMEM116-218ENST00000552839 CBLN1P23435 193 aa8.6□□□□□ -1.03
TMEM116-218ENST00000552839 RPL29P47914 159 aaKnown RBP8.6□□□□□ -1.03
TMEM116-218ENST00000552839 USF2Q15853 346 aaPredicted RBP8.6□□□□□ -1.03
TMEM116-218ENST00000552839 GUCA2BQ16661 112 aa8.6□□□□□ -1.03
TMEM116-218ENST00000552839 RPL7L1Q6DKI1 246 aaKnown RBP8.6□□□□□ -1.03
TMEM116-218ENST00000552839 TMUB2Q71RG4 321 aa8.6□□□□□ -1.03
TMEM116-218ENST00000552839 PARD6GQ9BYG4 376 aaPredicted RBP8.6□□□□□ -1.03
TMEM116-218ENST00000552839 EDA2RQ9HAV5 297 aa8.6□□□□□ -1.03
TMEM116-218ENST00000552839 WFDC1Q9HC57 220 aa8.6□□□□□ -1.03
TMEM116-218ENST00000552839 SLC39A9Q9NUM3 307 aa8.6□□□□□ -1.03
TMEM116-218ENST00000552839 SLC45A2Q9UMX9 530 aa8.6□□□□□ -1.03
TMEM116-218ENST00000552839 IGKV3-7A0A075B6H7 116 aa8.59□□□□□ -1.03
TMEM116-218ENST00000552839 ELOA3CA0A087WX78 387 aaPredicted RBP8.59□□□□□ -1.03
TMEM116-218ENST00000552839 HELTA6NFD8 242 aa8.59□□□□□ -1.03
TMEM116-218ENST00000552839 CD5P06127 495 aa8.59□□□□□ -1.03
TMEM116-218ENST00000552839 TPT1P13693 172 aaKnown RBP8.59□□□□□ -1.03
TMEM116-218ENST00000552839 CXCL2P19875 107 aa8.59□□□□□ -1.03
TMEM116-218ENST00000552839 PAFAH1B2P68402 229 aa8.59□□□□□ -1.03
TMEM116-218ENST00000552839 CD300CQ08708 224 aa8.59□□□□□ -1.03
TMEM116-218ENST00000552839 ACOT6Q3I5F7 207 aaPredicted RBP8.59□□□□□ -1.03
TMEM116-218ENST00000552839 OR8I2Q8N0Y5 310 aa8.59□□□□□ -1.03
TMEM116-218ENST00000552839 ST8SIA2Q92186 375 aa8.59□□□□□ -1.03
TMEM116-218ENST00000552839 NEURL2Q9BR09 285 aa8.59□□□□□ -1.03
TMEM116-218ENST00000552839 TM2D3Q9BRN9 247 aa8.59□□□□□ -1.03
TMEM116-218ENST00000552839 ARV1Q9H2C2 271 aa8.59□□□□□ -1.03
TMEM116-218ENST00000552839 SMPXQ9UHP9 88 aa8.59□□□□□ -1.03
TMEM116-218ENST00000552839 TIMM9Q9Y5J7 89 aa8.59□□□□□ -1.03
TMEM116-218ENST00000552839 SELENOKQ9Y6D0 94 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms