RNA–Protein interactions for RNA: ENST00000550914.6

PTCH1-221, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-221ENST00000550914 SCP2D1Q9UJQ7 156 aa9.15□□□□□ -0.94
PTCH1-221ENST00000550914 GOLT1BQ9Y3E0 138 aa9.15□□□□□ -0.94
PTCH1-221ENST00000550914 IGKV1D-37A0A075B6S9 117 aa9.14□□□□□ -0.95
PTCH1-221ENST00000550914 IGHV3OR16-12A0A075B7B8 117 aa9.14□□□□□ -0.95
PTCH1-221ENST00000550914 SNRPGP15A8MWD9 76 aa9.14□□□□□ -0.95
PTCH1-221ENST00000550914 IGKV3-20P01619 116 aa9.14□□□□□ -0.95
PTCH1-221ENST00000550914 HBE1P02100 147 aa9.14□□□□□ -0.95
PTCH1-221ENST00000550914 MEOX2P50222 304 aa9.14□□□□□ -0.95
PTCH1-221ENST00000550914 ZNF90Q03938 601 aa9.14□□□□□ -0.95
PTCH1-221ENST00000550914 EBLN2Q6P2I7 272 aa9.14□□□□□ -0.95
PTCH1-221ENST00000550914 CLVS1Q8IUQ0 354 aaPredicted RBP9.14□□□□□ -0.95
PTCH1-221ENST00000550914 OR4B1Q8NGF8 309 aa9.14□□□□□ -0.95
PTCH1-221ENST00000550914 OR51S1Q8NGJ8 323 aa9.14□□□□□ -0.95
PTCH1-221ENST00000550914 A0A0J9YX75 114 aa9.13□□□□□ -0.95
PTCH1-221ENST00000550914 A8MTW9 85 aa9.13□□□□□ -0.95
PTCH1-221ENST00000550914 CTDSP2O14595 271 aa9.13□□□□□ -0.95
PTCH1-221ENST00000550914 CFDP00746 253 aaPredicted RBP9.13□□□□□ -0.95
PTCH1-221ENST00000550914 ANXA3P12429 323 aa9.13□□□□□ -0.95
PTCH1-221ENST00000550914 FAM3BP58499 235 aaPredicted RBP9.13□□□□□ -0.95
PTCH1-221ENST00000550914 FXYD7P58549 80 aa9.13□□□□□ -0.95
PTCH1-221ENST00000550914 DEFB1P60022 68 aa9.13□□□□□ -0.95
PTCH1-221ENST00000550914 FAM78BQ5VT40 261 aa9.13□□□□□ -0.95
PTCH1-221ENST00000550914 LYZL2Q7Z4W2 148 aa9.13□□□□□ -0.95
PTCH1-221ENST00000550914 OR8I2Q8N0Y5 310 aa9.13□□□□□ -0.95
PTCH1-221ENST00000550914 TRGV9Q99603 122 aa9.13□□□□□ -0.95
PTCH1-221ENST00000550914 SLC35B3Q9H1N7 401 aa9.13□□□□□ -0.95
PTCH1-221ENST00000550914 RPRMQ9NS64 109 aa9.13□□□□□ -0.95
PTCH1-221ENST00000550914 SLC45A2Q9UMX9 530 aa9.13□□□□□ -0.95
PTCH1-221ENST00000550914 LOC102723971A0A1B0GUV8 181 aa9.12□□□□□ -0.95
PTCH1-221ENST00000550914 DUXBA0A1W2PPF3 345 aa9.12□□□□□ -0.95
PTCH1-221ENST00000550914 ANKRD20A5PA0PJZ0 165 aa9.12□□□□□ -0.95
PTCH1-221ENST00000550914 SMIM18P0DKX4 95 aa9.12□□□□□ -0.95
PTCH1-221ENST00000550914 AKR1C4P17516 323 aa9.12□□□□□ -0.95
PTCH1-221ENST00000550914 ALDH3B2P48448 385 aa9.12□□□□□ -0.95
PTCH1-221ENST00000550914 LYZP61626 148 aa9.12□□□□□ -0.95
PTCH1-221ENST00000550914 IL18Q14116 193 aa9.12□□□□□ -0.95
PTCH1-221ENST00000550914 RRN3P1Q2M238 152 aa9.12□□□□□ -0.95
PTCH1-221ENST00000550914 C1orf158Q8N1D5 194 aa9.12□□□□□ -0.95
PTCH1-221ENST00000550914 PPP1R14BQ96C90 147 aa9.12□□□□□ -0.95
PTCH1-221ENST00000550914 DIRAS2Q96HU8 199 aa9.12□□□□□ -0.95
PTCH1-221ENST00000550914 C7orf50Q9BRJ6 194 aaKnown RBP9.12□□□□□ -0.95
PTCH1-221ENST00000550914 YTHDF2Q9Y5A9 579 aaKnown RBP9.12□□□□□ -0.95
PTCH1-221ENST00000550914 ABCA13Q86UQ4 5058 aa9.12□□□□□ -0.95
PTCH1-221ENST00000550914 IGLV2-18A0A075B6J9 118 aa9.11□□□□□ -0.95
PTCH1-221ENST00000550914 GALR1P47211 349 aa9.11□□□□□ -0.95
PTCH1-221ENST00000550914 DAD1P61803 113 aa9.11□□□□□ -0.95
PTCH1-221ENST00000550914 RAB11AP62491 216 aa9.11□□□□□ -0.95
PTCH1-221ENST00000550914 GGNBP1Q5YKI7 109 aa9.11□□□□□ -0.95
PTCH1-221ENST00000550914 THAP8Q8NA92 274 aa9.11□□□□□ -0.95
PTCH1-221ENST00000550914 C15orf53Q8NAA6 179 aa9.11□□□□□ -0.95
PTCH1-221ENST00000550914 OR1S1Q8NH92 325 aa9.11□□□□□ -0.95
PTCH1-221ENST00000550914 IGF2BP2-AS1Q96M15 143 aa9.11□□□□□ -0.95
PTCH1-221ENST00000550914 MAGT1Q9H0U3 335 aa9.11□□□□□ -0.95
PTCH1-221ENST00000550914 PRR13Q9NZ81 148 aa9.11□□□□□ -0.95
PTCH1-221ENST00000550914 DOK5Q9P104 306 aa9.11□□□□□ -0.95
PTCH1-221ENST00000550914 IGKV1OR2-108A0A075B7D4 117 aa9.1□□□□□ -0.95
PTCH1-221ENST00000550914 PITX3O75364 302 aa9.1□□□□□ -0.95
PTCH1-221ENST00000550914 SLC25A6P12236 298 aa9.1□□□□□ -0.95
PTCH1-221ENST00000550914 HTN3P15516 51 aa9.1□□□□□ -0.95
PTCH1-221ENST00000550914 S100A7P31151 101 aa9.1□□□□□ -0.95
PTCH1-221ENST00000550914 C1orf134Q5TEV5 83 aa9.1□□□□□ -0.95
PTCH1-221ENST00000550914 TMEM88Q6PEY1 159 aa9.1□□□□□ -0.95
PTCH1-221ENST00000550914 OR4D5Q8NGN0 318 aa9.1□□□□□ -0.95
PTCH1-221ENST00000550914 C16orf92Q96LL3 132 aa9.1□□□□□ -0.95
PTCH1-221ENST00000550914 GPR82Q96P67 336 aa9.1□□□□□ -0.95
PTCH1-221ENST00000550914 PLA2G2EQ9NZK7 142 aa9.1□□□□□ -0.95
PTCH1-221ENST00000550914 RSL24D1Q9UHA3 163 aaKnown RBP9.1□□□□□ -0.95
PTCH1-221ENST00000550914 LYRM9A8MSI8 78 aa9.09□□□□□ -0.95
PTCH1-221ENST00000550914 F6UB75 175 aa9.09□□□□□ -0.95
PTCH1-221ENST00000550914 MED6O75586 246 aa9.09□□□□□ -0.95
PTCH1-221ENST00000550914 B2MP61769 119 aa9.09□□□□□ -0.95
PTCH1-221ENST00000550914 OR2F1Q13607 317 aa9.09□□□□□ -0.95
PTCH1-221ENST00000550914 SPCS2Q15005 226 aa9.09□□□□□ -0.95
PTCH1-221ENST00000550914 AMTNQ6UX39 209 aa9.09□□□□□ -0.95
PTCH1-221ENST00000550914 GPR141Q7Z602 305 aa9.09□□□□□ -0.95
PTCH1-221ENST00000550914 CIB3Q96Q77 187 aaPredicted RBP9.09□□□□□ -0.95
PTCH1-221ENST00000550914 TMEM208Q9BTX3 173 aa9.09□□□□□ -0.95
PTCH1-221ENST00000550914 MCUBQ9NWR8 336 aa9.09□□□□□ -0.95
PTCH1-221ENST00000550914 CCDC59Q9P031 241 aaKnown RBP9.09□□□□□ -0.95
PTCH1-221ENST00000550914 ZNF98A6NK75 572 aa9.08□□□□□ -0.96
PTCH1-221ENST00000550914 DUSP14O95147 198 aaKnown RBP9.08□□□□□ -0.96
PTCH1-221ENST00000550914 TSPOP30536 169 aa9.08□□□□□ -0.96
PTCH1-221ENST00000550914 RPP30P78346 268 aaKnown RBP9.08□□□□□ -0.96
PTCH1-221ENST00000550914 TMEM128Q5BJH2 165 aa9.08□□□□□ -0.96
PTCH1-221ENST00000550914 GSG1LQ6UXU4 331 aa9.08□□□□□ -0.96
PTCH1-221ENST00000550914 LRTM2Q8N967 370 aa9.08□□□□□ -0.96
PTCH1-221ENST00000550914 OR1B1Q8NGR6 318 aa9.08□□□□□ -0.96
PTCH1-221ENST00000550914 C20orf173Q96LM9 149 aa9.08□□□□□ -0.96
PTCH1-221ENST00000550914 RSG1Q9BU20 258 aa9.08□□□□□ -0.96
PTCH1-221ENST00000550914 SLC25A32Q9H2D1 315 aa9.08□□□□□ -0.96
PTCH1-221ENST00000550914 TMED3Q9Y3Q3 217 aa9.08□□□□□ -0.96
PTCH1-221ENST00000550914 PRSS46E5RG02 174 aa9.07□□□□□ -0.96
PTCH1-221ENST00000550914 INSP01308 110 aa9.07□□□□□ -0.96
PTCH1-221ENST00000550914 FAUP35544 74 aaKnown RBP9.07□□□□□ -0.96
PTCH1-221ENST00000550914 BPIFCQ8NFQ6 507 aa9.07□□□□□ -0.96
PTCH1-221ENST00000550914 DYNC2LI1Q8TCX1 351 aa9.07□□□□□ -0.96
PTCH1-221ENST00000550914 RAB2BQ8WUD1 216 aa9.07□□□□□ -0.96
PTCH1-221ENST00000550914 C17orf77Q96MU5 243 aa9.07□□□□□ -0.96
PTCH1-221ENST00000550914 SOSTQ9BQB4 213 aa9.07□□□□□ -0.96
PTCH1-221ENST00000550914 BCL7BQ9BQE9 202 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms