RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 TIGITQ495A1 244 aa10.04□□□□□ -0.8
NUP188-211ENST00000550219 TM4SF20Q53R12 229 aa10.04□□□□□ -0.8
NUP188-211ENST00000550219 TMUB2Q71RG4 321 aa10.04□□□□□ -0.8
NUP188-211ENST00000550219 C9orf62Q8N4C0 152 aa10.04□□□□□ -0.8
NUP188-211ENST00000550219 CYTL1Q9NRR1 136 aa10.04□□□□□ -0.8
NUP188-211ENST00000550219 UBE2L5PA0A1B0GUS4 154 aa10.03□□□□□ -0.8
NUP188-211ENST00000550219 ZFP92A6NM28 416 aa10.03□□□□□ -0.8
NUP188-211ENST00000550219 MPDU1O75352 247 aa10.03□□□□□ -0.8
NUP188-211ENST00000550219 SCGB2A1O75556 95 aa10.03□□□□□ -0.8
NUP188-211ENST00000550219 ZNF266Q14584 549 aa10.03□□□□□ -0.8
NUP188-211ENST00000550219 UNQ9165/PRO28630Q6UXU0 137 aa10.03□□□□□ -0.8
NUP188-211ENST00000550219 PPP1R14BQ96C90 147 aa10.03□□□□□ -0.8
NUP188-211ENST00000550219 MGST2Q99735 147 aa10.03□□□□□ -0.8
NUP188-211ENST00000550219 ARPC5LQ9BPX5 153 aa10.03□□□□□ -0.8
NUP188-211ENST00000550219 WDR61Q9GZS3 305 aaKnown RBP10.03□□□□□ -0.8
NUP188-211ENST00000550219 ARL6Q9H0F7 186 aa10.03□□□□□ -0.8
NUP188-211ENST00000550219 SLC45A2Q9UMX9 530 aa10.03□□□□□ -0.8
NUP188-211ENST00000550219 STARD9Q9P2P6 4700 aa10.02□□□□□ -0.81
NUP188-211ENST00000550219 BCL2L11O43521 198 aa10.02□□□□□ -0.81
NUP188-211ENST00000550219 TOMM40O96008 361 aa10.02□□□□□ -0.81
NUP188-211ENST00000550219 IFNA5P01569 189 aa10.02□□□□□ -0.81
NUP188-211ENST00000550219 NKX2-5P52952 324 aaPredicted RBP10.02□□□□□ -0.81
NUP188-211ENST00000550219 SELENOTP62341 195 aa10.02□□□□□ -0.81
NUP188-211ENST00000550219 ZNF90Q03938 601 aa10.02□□□□□ -0.81
NUP188-211ENST00000550219 RELQ04864 619 aaPredicted RBP10.02□□□□□ -0.81
NUP188-211ENST00000550219 RPL7L1Q6DKI1 246 aaKnown RBP10.02□□□□□ -0.81
NUP188-211ENST00000550219 ZNF600Q6ZNG1 722 aa10.02□□□□□ -0.81
NUP188-211ENST00000550219 CYP2G1PQ6ZSU1 146 aa10.02□□□□□ -0.81
NUP188-211ENST00000550219 IL17DQ8TAD2 202 aa10.02□□□□□ -0.81
NUP188-211ENST00000550219 GGTLC1Q9BX51 225 aa10.02□□□□□ -0.81
NUP188-211ENST00000550219 ARV1Q9H2C2 271 aa10.02□□□□□ -0.81
NUP188-211ENST00000550219 BOLA2-SMG1P6H3BVE0 249 aa10.01□□□□□ -0.81
NUP188-211ENST00000550219 NDUFA4O00483 81 aa10.01□□□□□ -0.81
NUP188-211ENST00000550219 AGPAT2O15120 278 aa10.01□□□□□ -0.81
NUP188-211ENST00000550219 FABP1P07148 127 aa10.01□□□□□ -0.81
NUP188-211ENST00000550219 RD3LP0DJH9 198 aa10.01□□□□□ -0.81
NUP188-211ENST00000550219 PSG1P11464 419 aa10.01□□□□□ -0.81
NUP188-211ENST00000550219 FGF7P21781 194 aa10.01□□□□□ -0.81
NUP188-211ENST00000550219 CAMLGP49069 296 aa10.01□□□□□ -0.81
NUP188-211ENST00000550219 RAB31Q13636 194 aa10.01□□□□□ -0.81
NUP188-211ENST00000550219 OPCMLQ14982 345 aa10.01□□□□□ -0.81
NUP188-211ENST00000550219 TMEM182Q6ZP80 229 aaPredicted RBP10.01□□□□□ -0.81
NUP188-211ENST00000550219 RBPMS2Q6ZRY4 209 aaKnown RBP10.01□□□□□ -0.81
NUP188-211ENST00000550219 NPCDR1Q9BY65 106 aa10.01□□□□□ -0.81
NUP188-211ENST00000550219 UFC1Q9Y3C8 167 aa10.01□□□□□ -0.81
NUP188-211ENST00000550219 LOC102724200A0A096LPH7 203 aaPredicted RBP10□□□□□ -0.81
NUP188-211ENST00000550219 BORCS7-ASMTA0A0B4J1R7 106 aa10□□□□□ -0.81
NUP188-211ENST00000550219 KANTRA0A1W2PQU2 76 aa10□□□□□ -0.81
NUP188-211ENST00000550219 CFDP00746 253 aaPredicted RBP10□□□□□ -0.81
NUP188-211ENST00000550219 LINC00869P0C866 280 aa10□□□□□ -0.81
NUP188-211ENST00000550219 RPL29P47914 159 aaKnown RBP10□□□□□ -0.81
NUP188-211ENST00000550219 PLP1P60201 277 aa10□□□□□ -0.81
NUP188-211ENST00000550219 PRR20EP86478 221 aa10□□□□□ -0.81
NUP188-211ENST00000550219 PRR20CP86479 221 aa10□□□□□ -0.81
NUP188-211ENST00000550219 PRR20DP86480 221 aa10□□□□□ -0.81
NUP188-211ENST00000550219 PRR20BP86481 221 aa10□□□□□ -0.81
NUP188-211ENST00000550219 PRR20AP86496 221 aa10□□□□□ -0.81
NUP188-211ENST00000550219 TOMM20LQ6UXN7 152 aa10□□□□□ -0.81
NUP188-211ENST00000550219 SCGB1C1Q8TD33 95 aa10□□□□□ -0.81
NUP188-211ENST00000550219 Q8WTZ3 238 aa10□□□□□ -0.81
NUP188-211ENST00000550219 MARC2Q969Z3 335 aa10□□□□□ -0.81
NUP188-211ENST00000550219 ZFAND3Q9H8U3 227 aa10□□□□□ -0.81
NUP188-211ENST00000550219 UBQLN2Q9UHD9 624 aa10□□□□□ -0.81
NUP188-211ENST00000550219 PUS1Q9Y606 427 aaKnown RBP eCLIP10□□□□□ -0.81
NUP188-211ENST00000550219 IGHV3OR16-8A0A075B7F1 116 aa9.99□□□□□ -0.81
NUP188-211ENST00000550219 GATA2P23769 480 aaPredicted RBP9.99□□□□□ -0.81
NUP188-211ENST00000550219 PMS2P11Q13670 270 aa9.99□□□□□ -0.81
NUP188-211ENST00000550219 OR51G1Q8NGK1 321 aa9.99□□□□□ -0.81
NUP188-211ENST00000550219 TMEM190Q8WZ59 177 aa9.99□□□□□ -0.81
NUP188-211ENST00000550219 GINS3Q9BRX5 216 aa9.99□□□□□ -0.81
NUP188-211ENST00000550219 TIMM9Q9Y5J7 89 aa9.99□□□□□ -0.81
NUP188-211ENST00000550219 K7EMT4 169 aa9.98□□□□□ -0.81
NUP188-211ENST00000550219 ZNF207O43670 478 aaKnown RBP9.98□□□□□ -0.81
NUP188-211ENST00000550219 HNRNPCP07910 306 aaKnown RBP eCLIP9.98□□□□□ -0.81
NUP188-211ENST00000550219 MIC13Q5XKP0 118 aa9.98□□□□□ -0.81
NUP188-211ENST00000550219 STPG3Q8N7X2 389 aa9.98□□□□□ -0.81
NUP188-211ENST00000550219 BPIFCQ8NFQ6 507 aa9.98□□□□□ -0.81
NUP188-211ENST00000550219 STOML3Q8TAV4 291 aa9.98□□□□□ -0.81
NUP188-211ENST00000550219 RSG1Q9BU20 258 aa9.98□□□□□ -0.81
NUP188-211ENST00000550219 C20orf24Q9BUV8 137 aa9.98□□□□□ -0.81
NUP188-211ENST00000550219 MRPL27Q9P0M9 148 aaKnown RBP9.98□□□□□ -0.81
NUP188-211ENST00000550219 CSMD3Q7Z407 3707 aa9.97□□□□□ -0.81
NUP188-211ENST00000550219 TRAV25A0A0B4J276 109 aa9.97□□□□□ -0.81
NUP188-211ENST00000550219 C17orf112F2Z3M2 114 aa9.97□□□□□ -0.81
NUP188-211ENST00000550219 C4BPBP20851 252 aa9.97□□□□□ -0.81
NUP188-211ENST00000550219 ATP6V0CP27449 155 aa9.97□□□□□ -0.81
NUP188-211ENST00000550219 ELLP55199 621 aaPredicted RBP9.97□□□□□ -0.81
NUP188-211ENST00000550219 B2MP61769 119 aa9.97□□□□□ -0.81
NUP188-211ENST00000550219 EIF5AP63241 154 aaKnown RBP9.97□□□□□ -0.81
NUP188-211ENST00000550219 PXDC1Q5TGL8 231 aa9.97□□□□□ -0.81
NUP188-211ENST00000550219 SLC51BQ86UW2 128 aa9.97□□□□□ -0.81
NUP188-211ENST00000550219 ZNF709Q8N972 641 aa9.97□□□□□ -0.81
NUP188-211ENST00000550219 HSD17B11Q8NBQ5 300 aa9.97□□□□□ -0.81
NUP188-211ENST00000550219 OR2G3Q8NGZ4 309 aa9.97□□□□□ -0.81
NUP188-211ENST00000550219 GNPNAT1Q96EK6 184 aaPredicted RBP9.97□□□□□ -0.81
NUP188-211ENST00000550219 RNF125Q96EQ8 232 aa9.97□□□□□ -0.81
NUP188-211ENST00000550219 OVOL2Q9BRP0 275 aa9.97□□□□□ -0.81
NUP188-211ENST00000550219 PSMG3Q9BT73 122 aaPredicted RBP9.97□□□□□ -0.81
NUP188-211ENST00000550219 ZNF471Q9BX82 626 aaPredicted RBP9.97□□□□□ -0.81
NUP188-211ENST00000550219 KCNIP2Q9NS61 270 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms