RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 C20orf173Q96LM9 149 aa10.91□□□□□ -0.66
RAB5C-205ENST00000550013 CACFD1Q9UGQ2 172 aa10.91□□□□□ -0.66
RAB5C-205ENST00000550013 A0A0J9YX75 114 aa10.9□□□□□ -0.66
RAB5C-205ENST00000550013 ISLRO14498 428 aa10.9□□□□□ -0.66
RAB5C-205ENST00000550013 CTDSP2O14595 271 aa10.9□□□□□ -0.66
RAB5C-205ENST00000550013 RGS5O15539 181 aa10.9□□□□□ -0.66
RAB5C-205ENST00000550013 PAX9P55771 341 aa10.9□□□□□ -0.66
RAB5C-205ENST00000550013 MRPS10P82664 201 aaKnown RBP10.9□□□□□ -0.66
RAB5C-205ENST00000550013 SMCO1Q147U7 214 aa10.9□□□□□ -0.66
RAB5C-205ENST00000550013 C1orf194Q5T5A4 169 aa10.9□□□□□ -0.66
RAB5C-205ENST00000550013 EBLN2Q6P2I7 272 aa10.9□□□□□ -0.66
RAB5C-205ENST00000550013 LYZL2Q7Z4W2 148 aa10.9□□□□□ -0.66
RAB5C-205ENST00000550013 SMIM4Q8WVI0 70 aa10.9□□□□□ -0.66
RAB5C-205ENST00000550013 PPP1R14BQ96C90 147 aa10.9□□□□□ -0.66
RAB5C-205ENST00000550013 SLC35E1Q96K37 410 aa10.9□□□□□ -0.66
RAB5C-205ENST00000550013 LRP1BQ9NZR2 4599 aa10.9□□□□□ -0.67
RAB5C-205ENST00000550013 GPX4P36969 197 aaPredicted RBP10.89□□□□□ -0.67
RAB5C-205ENST00000550013 CCR6P51684 374 aa10.89□□□□□ -0.67
RAB5C-205ENST00000550013 DAD1P61803 113 aa10.89□□□□□ -0.67
RAB5C-205ENST00000550013 RRN3P1Q2M238 152 aa10.89□□□□□ -0.67
RAB5C-205ENST00000550013 SPATA31B1PQ5VZV4 182 aa10.89□□□□□ -0.67
RAB5C-205ENST00000550013 CLVS1Q8IUQ0 354 aaPredicted RBP10.89□□□□□ -0.67
RAB5C-205ENST00000550013 OR8I2Q8N0Y5 310 aa10.89□□□□□ -0.67
RAB5C-205ENST00000550013 PRRT1Q99946 306 aa10.89□□□□□ -0.67
RAB5C-205ENST00000550013 KCNIP3Q9Y2W7 256 aa10.89□□□□□ -0.67
RAB5C-205ENST00000550013 A0A0B4J2A0 478 aa10.88□□□□□ -0.67
RAB5C-205ENST00000550013 PRM2P04554 102 aa10.88□□□□□ -0.67
RAB5C-205ENST00000550013 MAGT1Q9H0U3 335 aa10.88□□□□□ -0.67
RAB5C-205ENST00000550013 SHPKQ9UHJ6 478 aa10.88□□□□□ -0.67
RAB5C-205ENST00000550013 IGKV1OR2-108A0A075B7D4 117 aa10.87□□□□□ -0.67
RAB5C-205ENST00000550013 A8MTW9 85 aa10.87□□□□□ -0.67
RAB5C-205ENST00000550013 SNRPGP15A8MWD9 76 aa10.87□□□□□ -0.67
RAB5C-205ENST00000550013 FABP1P07148 127 aa10.87□□□□□ -0.67
RAB5C-205ENST00000550013 SMIM18P0DKX4 95 aa10.87□□□□□ -0.67
RAB5C-205ENST00000550013 AKR1C4P17516 323 aa10.87□□□□□ -0.67
RAB5C-205ENST00000550013 AMTNQ6UX39 209 aa10.87□□□□□ -0.67
RAB5C-205ENST00000550013 OR1S1Q8NH92 325 aa10.87□□□□□ -0.67
RAB5C-205ENST00000550013 C16orf92Q96LL3 132 aa10.87□□□□□ -0.67
RAB5C-205ENST00000550013 C17orf77Q96MU5 243 aa10.87□□□□□ -0.67
RAB5C-205ENST00000550013 SLC25A32Q9H2D1 315 aa10.87□□□□□ -0.67
RAB5C-205ENST00000550013 RPRMQ9NS64 109 aa10.87□□□□□ -0.67
RAB5C-205ENST00000550013 DOK5Q9P104 306 aa10.87□□□□□ -0.67
RAB5C-205ENST00000550013 ANKRD20A5PA0PJZ0 165 aa10.86□□□□□ -0.67
RAB5C-205ENST00000550013 CTDSPLO15194 276 aa10.86□□□□□ -0.67
RAB5C-205ENST00000550013 IAPPP10997 89 aa10.86□□□□□ -0.67
RAB5C-205ENST00000550013 ATP5IP56385 69 aaPredicted RBP10.86□□□□□ -0.67
RAB5C-205ENST00000550013 TNP2Q05952 138 aa10.86□□□□□ -0.67
RAB5C-205ENST00000550013 IL18Q14116 193 aa10.86□□□□□ -0.67
RAB5C-205ENST00000550013 IGF2BP2-AS1Q96M15 143 aa10.86□□□□□ -0.67
RAB5C-205ENST00000550013 TRGV9Q99603 122 aa10.86□□□□□ -0.67
RAB5C-205ENST00000550013 TMEM208Q9BTX3 173 aa10.86□□□□□ -0.67
RAB5C-205ENST00000550013 RSG1Q9BU20 258 aa10.86□□□□□ -0.67
RAB5C-205ENST00000550013 TMED3Q9Y3Q3 217 aa10.86□□□□□ -0.67
RAB5C-205ENST00000550013 ZNF705GA8MUZ8 300 aaPredicted RBP10.85□□□□□ -0.67
RAB5C-205ENST00000550013 MEOX2P50222 304 aa10.85□□□□□ -0.67
RAB5C-205ENST00000550013 SPCS2Q15005 226 aa10.85□□□□□ -0.67
RAB5C-205ENST00000550013 THAP8Q8NA92 274 aa10.85□□□□□ -0.67
RAB5C-205ENST00000550013 C15orf53Q8NAA6 179 aa10.85□□□□□ -0.67
RAB5C-205ENST00000550013 SLC25A22Q9H936 323 aa10.85□□□□□ -0.67
RAB5C-205ENST00000550013 PAIP2BQ9ULR5 123 aaKnown RBP10.85□□□□□ -0.67
RAB5C-205ENST00000550013 M0R2Z0 102 aa10.84□□□□□ -0.67
RAB5C-205ENST00000550013 GALR1P47211 349 aa10.84□□□□□ -0.67
RAB5C-205ENST00000550013 SPINK13Q1W4C9 94 aa10.84□□□□□ -0.67
RAB5C-205ENST00000550013 SAMD13Q5VXD3 122 aa10.84□□□□□ -0.67
RAB5C-205ENST00000550013 IGFL4Q6B9Z1 124 aa10.84□□□□□ -0.67
RAB5C-205ENST00000550013 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.84□□□□□ -0.67
RAB5C-205ENST00000550013 OR11H7Q8NGC8 314 aa10.84□□□□□ -0.67
RAB5C-205ENST00000550013 DIRAS2Q96HU8 199 aa10.84□□□□□ -0.67
RAB5C-205ENST00000550013 ATG101Q9BSB4 218 aa10.84□□□□□ -0.67
RAB5C-205ENST00000550013 MCUBQ9NWR8 336 aa10.84□□□□□ -0.67
RAB5C-205ENST00000550013 SCP2D1Q9UJQ7 156 aa10.84□□□□□ -0.67
RAB5C-205ENST00000550013 APOBP04114 4563 aaKnown RBP10.83□□□□□ -0.68
RAB5C-205ENST00000550013 ZNF98A6NK75 572 aa10.83□□□□□ -0.68
RAB5C-205ENST00000550013 C16orf90A8MZG2 172 aa10.83□□□□□ -0.68
RAB5C-205ENST00000550013 CRXO43186 299 aaPredicted RBP10.83□□□□□ -0.68
RAB5C-205ENST00000550013 PITX3O75364 302 aa10.83□□□□□ -0.68
RAB5C-205ENST00000550013 DEFB130BP0DP73 79 aa10.83□□□□□ -0.68
RAB5C-205ENST00000550013 DEFB130AP0DP74 79 aa10.83□□□□□ -0.68
RAB5C-205ENST00000550013 GATA2P23769 480 aaPredicted RBP10.83□□□□□ -0.68
RAB5C-205ENST00000550013 CNN1P51911 297 aaKnown RBP10.83□□□□□ -0.68
RAB5C-205ENST00000550013 FAM3BP58499 235 aaPredicted RBP10.83□□□□□ -0.68
RAB5C-205ENST00000550013 RAB11AP62491 216 aa10.83□□□□□ -0.68
RAB5C-205ENST00000550013 TMEM182Q6ZP80 229 aaPredicted RBP10.83□□□□□ -0.68
RAB5C-205ENST00000550013 SCGB3A2Q96PL1 93 aa10.83□□□□□ -0.68
RAB5C-205ENST00000550013 TRAV8-2A0A0B4J237 113 aa10.82□□□□□ -0.68
RAB5C-205ENST00000550013 NBDYA0A0U1RRE5 68 aa10.82□□□□□ -0.68
RAB5C-205ENST00000550013 LYRM9A8MSI8 78 aa10.82□□□□□ -0.68
RAB5C-205ENST00000550013 INSP01308 110 aa10.82□□□□□ -0.68
RAB5C-205ENST00000550013 ANXA3P12429 323 aa10.82□□□□□ -0.68
RAB5C-205ENST00000550013 ALDH3B2P48448 385 aa10.82□□□□□ -0.68
RAB5C-205ENST00000550013 SRPXP78539 464 aa10.82□□□□□ -0.68
RAB5C-205ENST00000550013 FCN2Q15485 313 aa10.82□□□□□ -0.68
RAB5C-205ENST00000550013 BAP18Q8IXM2 172 aa10.82□□□□□ -0.68
RAB5C-205ENST00000550013 RNF182Q8N6D2 247 aa10.82□□□□□ -0.68
RAB5C-205ENST00000550013 ZNRF2Q8NHG8 242 aa10.82□□□□□ -0.68
RAB5C-205ENST00000550013 PRSS46E5RG02 174 aa10.81□□□□□ -0.68
RAB5C-205ENST00000550013 NUDT3O95989 172 aa10.81□□□□□ -0.68
RAB5C-205ENST00000550013 ORM2P19652 201 aa10.81□□□□□ -0.68
RAB5C-205ENST00000550013 AZU1P20160 251 aa10.81□□□□□ -0.68
RAB5C-205ENST00000550013 GGNBP1Q5YKI7 109 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms