RNA–Protein interactions for RNA: ENST00000548097.5

KRT4-201, Transcript of keratin 4, humanhuman

TSL 1 (best)

Gene KRT4, Length 1,839 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4-201ENST00000548097 BAP18Q8IXM2 172 aa13.03□□□□□ -0.32
KRT4-201ENST00000548097 OR2G3Q8NGZ4 309 aa13.03□□□□□ -0.32
KRT4-201ENST00000548097 DAZ1Q9NQZ3 744 aaKnown RBP13.03□□□□□ -0.32
KRT4-201ENST00000548097 CMYA5Q8N3K9 4069 aa13.03□□□□□ -0.32
KRT4-201ENST00000548097 TPT1P13693 172 aaKnown RBP13.02□□□□□ -0.32
KRT4-201ENST00000548097 RAB2AP61019 212 aa13.02□□□□□ -0.32
KRT4-201ENST00000548097 SLC51BQ86UW2 128 aa13.02□□□□□ -0.32
KRT4-201ENST00000548097 ST8SIA2Q92186 375 aa13.02□□□□□ -0.32
KRT4-201ENST00000548097 MRPL27Q9P0M9 148 aaKnown RBP13.02□□□□□ -0.32
KRT4-201ENST00000548097 RABAC1Q9UI14 185 aa13.02□□□□□ -0.32
KRT4-201ENST00000548097 UFC1Q9Y3C8 167 aa13.02□□□□□ -0.32
KRT4-201ENST00000548097 A8MWP6 167 aa13.02□□□□□ -0.33
KRT4-201ENST00000548097 COX7A2P2O60397 106 aa13.02□□□□□ -0.33
KRT4-201ENST00000548097 HYPMO75409 117 aa13.02□□□□□ -0.33
KRT4-201ENST00000548097 CSN3P07498 182 aa13.02□□□□□ -0.33
KRT4-201ENST00000548097 SPP1P10451 314 aa13.02□□□□□ -0.33
KRT4-201ENST00000548097 FOLR2P14207 255 aa13.02□□□□□ -0.33
KRT4-201ENST00000548097 CBLN1P23435 193 aa13.02□□□□□ -0.33
KRT4-201ENST00000548097 NPPCP23582 126 aa13.02□□□□□ -0.33
KRT4-201ENST00000548097 SPATA31B1PQ5VZV4 182 aa13.02□□□□□ -0.33
KRT4-201ENST00000548097 TMED6Q8WW62 240 aa13.02□□□□□ -0.33
KRT4-201ENST00000548097 GNPNAT1Q96EK6 184 aaPredicted RBP13.02□□□□□ -0.33
KRT4-201ENST00000548097 METTL26Q96S19 204 aa13.02□□□□□ -0.33
KRT4-201ENST00000548097 TIMM9Q9Y5J7 89 aa13.02□□□□□ -0.33
KRT4-201ENST00000548097 DNHD1Q96M86 4753 aa13.01□□□□□ -0.33
KRT4-201ENST00000548097 CFDP00746 253 aaPredicted RBP13.01□□□□□ -0.33
KRT4-201ENST00000548097 CD33P20138 364 aa13.01□□□□□ -0.33
KRT4-201ENST00000548097 PLP1P60201 277 aa13.01□□□□□ -0.33
KRT4-201ENST00000548097 STOML3Q8TAV4 291 aa13.01□□□□□ -0.33
KRT4-201ENST00000548097 PSMG3Q9BT73 122 aaPredicted RBP13.01□□□□□ -0.33
KRT4-201ENST00000548097 ELOVL1Q9BW60 279 aa13.01□□□□□ -0.33
KRT4-201ENST00000548097 SCRT1Q9BWW7 348 aa13.01□□□□□ -0.33
KRT4-201ENST00000548097 SLC25A22Q9H936 323 aa13.01□□□□□ -0.33
KRT4-201ENST00000548097 SEPSECSQ9HD40 501 aaKnown RBP13.01□□□□□ -0.33
KRT4-201ENST00000548097 PEMTQ9UBM1 199 aa13.01□□□□□ -0.33
KRT4-201ENST00000548097 TRAV5A0A0B4J249 113 aa13□□□□□ -0.33
KRT4-201ENST00000548097 IGHV7-4-1A0A0J9YVY3 117 aa13□□□□□ -0.33
KRT4-201ENST00000548097 CRYBB3P26998 211 aa13□□□□□ -0.33
KRT4-201ENST00000548097 C10orf113Q5VZT2 155 aa13□□□□□ -0.33
KRT4-201ENST00000548097 LINC00305Q7Z4B0 112 aa13□□□□□ -0.33
KRT4-201ENST00000548097 RHPN1-AS1Q9BWJ2 59 aa13□□□□□ -0.33
KRT4-201ENST00000548097 SLC25A39Q9BZJ4 359 aaPredicted RBP13□□□□□ -0.33
KRT4-201ENST00000548097 DNAJC4Q9NNZ3 241 aa13□□□□□ -0.33
KRT4-201ENST00000548097 HIGD1AQ9Y241 93 aa13□□□□□ -0.33
KRT4-201ENST00000548097 K7EMT4 169 aa12.99□□□□□ -0.33
KRT4-201ENST00000548097 SAP30O75446 220 aa12.99□□□□□ -0.33
KRT4-201ENST00000548097 MLXQ9UH92 298 aa12.99□□□□□ -0.33
KRT4-201ENST00000548097 SMPXQ9UHP9 88 aa12.99□□□□□ -0.33
KRT4-201ENST00000548097 PKD1L1Q8TDX9 2849 aa12.99□□□□□ -0.33
KRT4-201ENST00000548097 CHEK1O14757 476 aa12.99□□□□□ -0.33
KRT4-201ENST00000548097 HMGB3O15347 200 aaKnown RBP12.99□□□□□ -0.33
KRT4-201ENST00000548097 SNRPCP09234 159 aaKnown RBP12.99□□□□□ -0.33
KRT4-201ENST00000548097 IGLL1P15814 213 aa12.99□□□□□ -0.33
KRT4-201ENST00000548097 FAM78BQ5VT40 261 aa12.99□□□□□ -0.33
KRT4-201ENST00000548097 RNF2Q99496 336 aa12.99□□□□□ -0.33
KRT4-201ENST00000548097 KCNIP2Q9NS61 270 aa12.99□□□□□ -0.33
KRT4-201ENST00000548097 IGKV3-7A0A075B6H7 116 aa12.98□□□□□ -0.33
KRT4-201ENST00000548097 SEC14L6B5MCN3 397 aa12.98□□□□□ -0.33
KRT4-201ENST00000548097 C4BPBP20851 252 aa12.98□□□□□ -0.33
KRT4-201ENST00000548097 FHITP49789 147 aa12.98□□□□□ -0.33
KRT4-201ENST00000548097 FAM74A1Q5RGS3 127 aa12.98□□□□□ -0.33
KRT4-201ENST00000548097 FAM122CQ6P4D5 195 aa12.98□□□□□ -0.33
KRT4-201ENST00000548097 ALKAL2Q6UX46 152 aa12.98□□□□□ -0.33
KRT4-201ENST00000548097 MIR17HGQ75NE6 70 aa12.98□□□□□ -0.33
KRT4-201ENST00000548097 OR10G4Q8NGN3 311 aa12.98□□□□□ -0.33
KRT4-201ENST00000548097 OR10G9Q8NGN4 311 aa12.98□□□□□ -0.33
KRT4-201ENST00000548097 OR10G7Q8NGN6 311 aa12.98□□□□□ -0.33
KRT4-201ENST00000548097 RPRMQ9NS64 109 aa12.98□□□□□ -0.33
KRT4-201ENST00000548097 ZNF98A6NK75 572 aa12.97□□□□□ -0.33
KRT4-201ENST00000548097 H3BRN7 92 aa12.97□□□□□ -0.33
KRT4-201ENST00000548097 BUB3O43684 328 aa12.97□□□□□ -0.33
KRT4-201ENST00000548097 M6PRP20645 277 aa12.97□□□□□ -0.33
KRT4-201ENST00000548097 EIF5AP63241 154 aaKnown RBP12.97□□□□□ -0.33
KRT4-201ENST00000548097 ACOT6Q3I5F7 207 aaPredicted RBP12.97□□□□□ -0.33
KRT4-201ENST00000548097 SSX7Q7RTT5 188 aa12.97□□□□□ -0.33
KRT4-201ENST00000548097 RPP25LQ8N5L8 163 aaKnown RBP12.97□□□□□ -0.33
KRT4-201ENST00000548097 OR1L4Q8NGR5 311 aa12.97□□□□□ -0.33
KRT4-201ENST00000548097 U3KQE9 123 aa12.97□□□□□ -0.33
KRT4-201ENST00000548097 ELOA3CA0A087WX78 387 aaPredicted RBP12.97□□□□□ -0.33
KRT4-201ENST00000548097 SEC11BP0C7V7 166 aa12.97□□□□□ -0.33
KRT4-201ENST00000548097 SERF2P84101 59 aa12.97□□□□□ -0.33
KRT4-201ENST00000548097 WFDC9Q8NEX5 89 aa12.97□□□□□ -0.33
KRT4-201ENST00000548097 PFDN5Q99471 154 aa12.97□□□□□ -0.33
KRT4-201ENST00000548097 SHANK2-AS3Q9BTD1 123 aa12.97□□□□□ -0.33
KRT4-201ENST00000548097 C8orf88P0DMB2 117 aa12.96□□□□□ -0.33
KRT4-201ENST00000548097 IFITM2Q01629 132 aa12.96□□□□□ -0.33
KRT4-201ENST00000548097 AKR1C8PQ5T2L2 129 aa12.96□□□□□ -0.33
KRT4-201ENST00000548097 PXDC1Q5TGL8 231 aa12.96□□□□□ -0.33
KRT4-201ENST00000548097 DYNLRB2Q8TF09 96 aa12.96□□□□□ -0.33
KRT4-201ENST00000548097 GATAD1Q8WUU5 269 aa12.96□□□□□ -0.33
KRT4-201ENST00000548097 NOTCH3Q9UM47 2321 aa12.96□□□□□ -0.34
KRT4-201ENST00000548097 IZUMO1RA6ND01 250 aa12.95□□□□□ -0.34
KRT4-201ENST00000548097 TMEM41BQ5BJD5 291 aa12.95□□□□□ -0.34
KRT4-201ENST00000548097 ZNF726P1Q15940 193 aa12.95□□□□□ -0.34
KRT4-201ENST00000548097 OXLD1Q5BKU9 147 aa12.95□□□□□ -0.34
KRT4-201ENST00000548097 C16orf54Q6UWD8 224 aa12.95□□□□□ -0.34
KRT4-201ENST00000548097 OR8I2Q8N0Y5 310 aa12.95□□□□□ -0.34
KRT4-201ENST00000548097 NARS2Q96I59 477 aaKnown RBP12.95□□□□□ -0.34
KRT4-201ENST00000548097 FUT9Q9Y231 359 aa12.95□□□□□ -0.34
KRT4-201ENST00000548097 RPL11P62913 178 aaKnown RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms