RNA–Protein interactions for RNA: ENST00000546997.1

BRF1-208, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-208ENST00000546997 RBP4P02753 201 aa13.21□□□□□ -0.29
BRF1-208ENST00000546997 VDAC2P45880 294 aaPredicted RBP13.21□□□□□ -0.29
BRF1-208ENST00000546997 RHOGP84095 191 aa13.21□□□□□ -0.29
BRF1-208ENST00000546997 KRTAP1-3Q8IUG1 177 aa13.21□□□□□ -0.29
BRF1-208ENST00000546997 SLC24A4Q8NFF2 622 aa13.21□□□□□ -0.29
BRF1-208ENST00000546997 COMMD5Q9GZQ3 224 aa13.21□□□□□ -0.29
BRF1-208ENST00000546997 TMEM140Q9NV12 185 aa13.21□□□□□ -0.29
BRF1-208ENST00000546997 C1RLQ9NZP8 487 aa13.21□□□□□ -0.29
BRF1-208ENST00000546997 FLNAP21333 2647 aaKnown RBP13.2□□□□□ -0.3
BRF1-208ENST00000546997 TRAV3A0A0B4J244 114 aa13.2□□□□□ -0.3
BRF1-208ENST00000546997 SLC25A16P16260 332 aa13.2□□□□□ -0.3
BRF1-208ENST00000546997 TIGITQ495A1 244 aa13.2□□□□□ -0.3
BRF1-208ENST00000546997 FAM162BQ5T6X4 162 aa13.2□□□□□ -0.3
BRF1-208ENST00000546997 FOXH1O75593 365 aa13.2□□□□□ -0.3
BRF1-208ENST00000546997 CT45A6P0DMU7 189 aa13.2□□□□□ -0.3
BRF1-208ENST00000546997 CT45A5P0DMU8 189 aa13.2□□□□□ -0.3
BRF1-208ENST00000546997 CT45A7P0DMV0 189 aa13.2□□□□□ -0.3
BRF1-208ENST00000546997 PMCHP20382 165 aa13.2□□□□□ -0.3
BRF1-208ENST00000546997 USF1P22415 310 aaPredicted RBP13.2□□□□□ -0.3
BRF1-208ENST00000546997 KLF5Q13887 457 aaPredicted RBP13.2□□□□□ -0.3
BRF1-208ENST00000546997 MIC13Q5XKP0 118 aa13.2□□□□□ -0.3
BRF1-208ENST00000546997 SMIM15Q7Z3B0 74 aa13.2□□□□□ -0.3
BRF1-208ENST00000546997 ABHD12Q8N2K0 398 aa13.2□□□□□ -0.3
BRF1-208ENST00000546997 TET2Q6N021 2002 aaPredicted RBP13.19□□□□□ -0.3
BRF1-208ENST00000546997 IZUMO1RA6ND01 250 aa13.19□□□□□ -0.3
BRF1-208ENST00000546997 H0YJW9 148 aa13.19□□□□□ -0.3
BRF1-208ENST00000546997 J3QR06 171 aa13.19□□□□□ -0.3
BRF1-208ENST00000546997 M0R1W7 72 aa13.19□□□□□ -0.3
BRF1-208ENST00000546997 HNF1AP20823 631 aa13.19□□□□□ -0.3
BRF1-208ENST00000546997 COX7A1P24310 79 aa13.19□□□□□ -0.3
BRF1-208ENST00000546997 SRIP30626 198 aa13.19□□□□□ -0.3
BRF1-208ENST00000546997 OR4C5Q8NGB2 326 aa13.19□□□□□ -0.3
BRF1-208ENST00000546997 RCHY1Q96PM5 261 aa13.19□□□□□ -0.3
BRF1-208ENST00000546997 BAHCC1Q9P281 2608 aa13.19□□□□□ -0.3
BRF1-208ENST00000546997 ZFHX3Q15911 3703 aa13.19□□□□□ -0.3
BRF1-208ENST00000546997 ABCA1O95477 2261 aa13.18□□□□□ -0.3
BRF1-208ENST00000546997 APCSP02743 223 aa13.18□□□□□ -0.3
BRF1-208ENST00000546997 RPS16P62249 146 aaKnown RBP13.18□□□□□ -0.3
BRF1-208ENST00000546997 CENPWQ5EE01 88 aa13.18□□□□□ -0.3
BRF1-208ENST00000546997 TEPPQ6URK8 271 aa13.18□□□□□ -0.3
BRF1-208ENST00000546997 OR4F17Q8NGA8 305 aa13.18□□□□□ -0.3
BRF1-208ENST00000546997 OR9G1Q8NH87 305 aa13.18□□□□□ -0.3
BRF1-208ENST00000546997 ZNF596Q8TC21 504 aa13.18□□□□□ -0.3
BRF1-208ENST00000546997 C19orf24Q9BVV8 132 aa13.18□□□□□ -0.3
BRF1-208ENST00000546997 MYO9AB2RTY4 2548 aa13.18□□□□□ -0.3
BRF1-208ENST00000546997 TEX15Q9BXT5 2789 aa13.18□□□□□ -0.3
BRF1-208ENST00000546997 TLN2Q9Y4G6 2542 aa13.18□□□□□ -0.3
BRF1-208ENST00000546997 KLRD1Q13241 179 aa13.18□□□□□ -0.3
BRF1-208ENST00000546997 POU2AF1Q16633 256 aa13.18□□□□□ -0.3
BRF1-208ENST00000546997 OR4A47Q6IF82 309 aa13.18□□□□□ -0.3
BRF1-208ENST00000546997 ZNF833PQ6ZTB9 187 aa13.18□□□□□ -0.3
BRF1-208ENST00000546997 C8orf31Q8N9H6 132 aa13.18□□□□□ -0.3
BRF1-208ENST00000546997 MAPK1IP1LQ8NDC0 245 aa13.18□□□□□ -0.3
BRF1-208ENST00000546997 CLEC7AQ9BXN2 247 aa13.18□□□□□ -0.3
BRF1-208ENST00000546997 FLNBO75369 2602 aaKnown RBP13.17□□□□□ -0.3
BRF1-208ENST00000546997 REG1BP48304 166 aa13.17□□□□□ -0.3
BRF1-208ENST00000546997 HINT1P49773 126 aaPredicted RBP13.17□□□□□ -0.3
BRF1-208ENST00000546997 CSPG4Q6UVK1 2322 aa13.17□□□□□ -0.3
BRF1-208ENST00000546997 UNQ5815/PRO19632Q6UWF5 114 aa13.17□□□□□ -0.3
BRF1-208ENST00000546997 VMO1Q7Z5L0 202 aa13.17□□□□□ -0.3
BRF1-208ENST00000546997 KIR3DL3Q8N743 410 aa13.17□□□□□ -0.3
BRF1-208ENST00000546997 OR10X1Q8NGY0 326 aa13.17□□□□□ -0.3
BRF1-208ENST00000546997 SIRPDQ9H106 197 aa13.17□□□□□ -0.3
BRF1-208ENST00000546997 HEYLQ9NQ87 328 aaPredicted RBP13.17□□□□□ -0.3
BRF1-208ENST00000546997 C15orf61A6NNL5 157 aa13.16□□□□□ -0.3
BRF1-208ENST00000546997 RNF223E7ERA6 249 aa13.16□□□□□ -0.3
BRF1-208ENST00000546997 IGLV1-47P01700 117 aa13.16□□□□□ -0.3
BRF1-208ENST00000546997 FRMD6-AS1P0C7T7 363 aa13.16□□□□□ -0.3
BRF1-208ENST00000546997 PRTN3P24158 256 aa13.16□□□□□ -0.3
BRF1-208ENST00000546997 PRR20EP86478 221 aa13.16□□□□□ -0.3
BRF1-208ENST00000546997 PRR20CP86479 221 aa13.16□□□□□ -0.3
BRF1-208ENST00000546997 PRR20DP86480 221 aa13.16□□□□□ -0.3
BRF1-208ENST00000546997 PRR20BP86481 221 aa13.16□□□□□ -0.3
BRF1-208ENST00000546997 PRR20AP86496 221 aa13.16□□□□□ -0.3
BRF1-208ENST00000546997 DIAPH2-AS1Q14236 149 aa13.16□□□□□ -0.3
BRF1-208ENST00000546997 HCP5Q6MZN7 132 aa13.16□□□□□ -0.3
BRF1-208ENST00000546997 LINC00311Q8N616 119 aa13.16□□□□□ -0.3
BRF1-208ENST00000546997 C18orf32Q8TCD1 76 aa13.16□□□□□ -0.3
BRF1-208ENST00000546997 TNFRSF14Q92956 283 aa13.16□□□□□ -0.3
BRF1-208ENST00000546997 ZNF331Q9NQX6 463 aaPredicted RBP13.16□□□□□ -0.3
BRF1-208ENST00000546997 PQLC2Q6ZP29 291 aa13.16□□□□□ -0.3
BRF1-208ENST00000546997 FAM231DQ6ZW35 169 aa13.16□□□□□ -0.3
BRF1-208ENST00000546997 STPG3Q8N7X2 389 aa13.16□□□□□ -0.3
BRF1-208ENST00000546997 Q96MF0 132 aa13.16□□□□□ -0.3
BRF1-208ENST00000546997 CHRDL1Q9BU40 450 aa13.16□□□□□ -0.3
BRF1-208ENST00000546997 ST20Q9HBF5 79 aa13.16□□□□□ -0.3
BRF1-208ENST00000546997 TMEM14BQ9NUH8 114 aa13.16□□□□□ -0.3
BRF1-208ENST00000546997 TCF19Q9Y242 345 aa13.16□□□□□ -0.3
BRF1-208ENST00000546997 FOXA2Q9Y261 457 aaPredicted RBP13.16□□□□□ -0.3
BRF1-208ENST00000546997 OR2J3O76001 311 aa13.15□□□□□ -0.3
BRF1-208ENST00000546997 IGKV1-16P04430 117 aa13.15□□□□□ -0.3
BRF1-208ENST00000546997 NPY1RP25929 384 aa13.15□□□□□ -0.3
BRF1-208ENST00000546997 PET117Q6UWS5 81 aa13.15□□□□□ -0.3
BRF1-208ENST00000546997 C1orf159Q96HA4 380 aa13.15□□□□□ -0.3
BRF1-208ENST00000546997 WNT10AQ9GZT5 417 aa13.15□□□□□ -0.3
BRF1-208ENST00000546997 SEPSECSQ9HD40 501 aaKnown RBP13.15□□□□□ -0.3
BRF1-208ENST00000546997 INSIG2Q9Y5U4 225 aa13.15□□□□□ -0.3
BRF1-208ENST00000546997 A0A1W2PRE2 83 aa13.14□□□□□ -0.31
BRF1-208ENST00000546997 FAM181BA6NEQ2 426 aa13.14□□□□□ -0.31
BRF1-208ENST00000546997 CRXO43186 299 aaPredicted RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms