RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-222ENST00000545308 MLLT11Q13015 90 aaPredicted RBP2.26□□□□□ -2.05
SNHG1-222ENST00000545308 MMDQ15546 238 aa2.26□□□□□ -2.05
SNHG1-222ENST00000545308 LIN52Q52LA3 116 aa2.26□□□□□ -2.05
SNHG1-222ENST00000545308 COQ5Q5HYK3 327 aa2.26□□□□□ -2.05
SNHG1-222ENST00000545308 LDLRAD2Q5SZI1 272 aa2.26□□□□□ -2.05
SNHG1-222ENST00000545308 TCF23Q7RTU1 214 aa2.26□□□□□ -2.05
SNHG1-222ENST00000545308 VMO1Q7Z5L0 202 aa2.26□□□□□ -2.05
SNHG1-222ENST00000545308 SLC51BQ86UW2 128 aa2.26□□□□□ -2.05
SNHG1-222ENST00000545308 Q8N2B8 174 aa2.26□□□□□ -2.05
SNHG1-222ENST00000545308 KRTCAP2Q8N6L1 136 aa2.26□□□□□ -2.05
SNHG1-222ENST00000545308 YIPF7Q8N8F6 280 aa2.26□□□□□ -2.05
SNHG1-222ENST00000545308 OR4A5Q8NH83 315 aa2.26□□□□□ -2.05
SNHG1-222ENST00000545308 RPS4Y2Q8TD47 263 aa2.26□□□□□ -2.05
SNHG1-222ENST00000545308 C10orf82Q8WW14 230 aa2.26□□□□□ -2.05
SNHG1-222ENST00000545308 CMBLQ96DG6 245 aa2.26□□□□□ -2.05
SNHG1-222ENST00000545308 MALSU1Q96EH3 234 aa2.26□□□□□ -2.05
SNHG1-222ENST00000545308 TSPAN32Q96QS1 320 aa2.26□□□□□ -2.05
SNHG1-222ENST00000545308 ALX4Q9H161 411 aaPredicted RBP2.26□□□□□ -2.05
SNHG1-222ENST00000545308 OR51I1Q9H343 314 aa2.26□□□□□ -2.05
SNHG1-222ENST00000545308 KCNIP2Q9NS61 270 aa2.26□□□□□ -2.05
SNHG1-222ENST00000545308 KAAG1Q9UBP8 84 aa2.26□□□□□ -2.05
SNHG1-222ENST00000545308 MARCOQ9UEW3 520 aaPredicted RBP2.26□□□□□ -2.05
SNHG1-222ENST00000545308 UTP11Q9Y3A2 253 aaKnown RBP2.26□□□□□ -2.05
SNHG1-222ENST00000545308 TIMM22Q9Y584 194 aa2.26□□□□□ -2.05
SNHG1-222ENST00000545308 TRAPPC1Q9Y5R8 145 aa2.26□□□□□ -2.05
SNHG1-222ENST00000545308 A0A087WUJ7 227 aa2.25□□□□□ -2.05
SNHG1-222ENST00000545308 CLDN24A6NM45 220 aa2.25□□□□□ -2.05
SNHG1-222ENST00000545308 A8MT66 165 aa2.25□□□□□ -2.05
SNHG1-222ENST00000545308 NDUFB3O43676 98 aa2.25□□□□□ -2.05
SNHG1-222ENST00000545308 ARL6IP5O75915 188 aa2.25□□□□□ -2.05
SNHG1-222ENST00000545308 PFN1P07737 140 aaKnown RBP2.25□□□□□ -2.05
SNHG1-222ENST00000545308 CST2P09228 141 aa2.25□□□□□ -2.05
SNHG1-222ENST00000545308 GADD45AP24522 165 aa2.25□□□□□ -2.05
SNHG1-222ENST00000545308 CEBPGP53567 150 aa2.25□□□□□ -2.05
SNHG1-222ENST00000545308 AP2S1P53680 142 aaPredicted RBP2.25□□□□□ -2.05
SNHG1-222ENST00000545308 MAGOHP61326 146 aaKnown RBP2.25□□□□□ -2.05
SNHG1-222ENST00000545308 NCALDP61601 193 aa2.25□□□□□ -2.05
SNHG1-222ENST00000545308 GLO1Q04760 184 aa2.25□□□□□ -2.05
SNHG1-222ENST00000545308 OR8B8Q15620 311 aa2.25□□□□□ -2.05
SNHG1-222ENST00000545308 MAPK14Q16539 360 aa2.25□□□□□ -2.05
SNHG1-222ENST00000545308 CCDC153Q494R4 210 aa2.25□□□□□ -2.05
SNHG1-222ENST00000545308 MESTQ5EB52 335 aa2.25□□□□□ -2.05
SNHG1-222ENST00000545308 PABPC1L2AQ5JQF8 200 aa2.25□□□□□ -2.05
SNHG1-222ENST00000545308 FAM27BQ5VT28 67 aa2.25□□□□□ -2.05
SNHG1-222ENST00000545308 SPINT4Q6UDR6 99 aa2.25□□□□□ -2.05
SNHG1-222ENST00000545308 LRRC18Q8N456 261 aa2.25□□□□□ -2.05
SNHG1-222ENST00000545308 CLDN22Q8N7P3 220 aa2.25□□□□□ -2.05
SNHG1-222ENST00000545308 LY6G5BQ8NDX9 201 aa2.25□□□□□ -2.05
SNHG1-222ENST00000545308 OR8J2Q8NGG1 315 aa2.25□□□□□ -2.05
SNHG1-222ENST00000545308 OR5D16Q8NGK9 328 aa2.25□□□□□ -2.05
SNHG1-222ENST00000545308 OR5J2Q8NH18 312 aa2.25□□□□□ -2.05
SNHG1-222ENST00000545308 TNFAIP8L1Q8WVP5 186 aa2.25□□□□□ -2.05
SNHG1-222ENST00000545308 MROQ9BYG7 248 aa2.25□□□□□ -2.05
SNHG1-222ENST00000545308 GABARAPL1Q9H0R8 117 aa2.25□□□□□ -2.05
SNHG1-222ENST00000545308 OR2D2Q9H210 308 aa2.25□□□□□ -2.05
SNHG1-222ENST00000545308 ZNF492Q9P255 531 aa2.25□□□□□ -2.05
SNHG1-222ENST00000545308 SOX21Q9Y651 276 aaPredicted RBP2.25□□□□□ -2.05
SNHG1-222ENST00000545308 ICOSQ9Y6W8 199 aa2.25□□□□□ -2.05
SNHG1-222ENST00000545308 IGKV1-12A0A0C4DH73 117 aa2.24□□□□□ -2.05
SNHG1-222ENST00000545308 PRORSD1PA6NEY8 169 aa2.24□□□□□ -2.05
SNHG1-222ENST00000545308 VGLL3A8MV65 326 aa2.24□□□□□ -2.05
SNHG1-222ENST00000545308 LRRN3E7EW58 273 aa2.24□□□□□ -2.05
SNHG1-222ENST00000545308 H0Y980 276 aa2.24□□□□□ -2.05
SNHG1-222ENST00000545308 H3BQ85 93 aa2.24□□□□□ -2.05
SNHG1-222ENST00000545308 M0QZK8 103 aa2.24□□□□□ -2.05
SNHG1-222ENST00000545308 IGKV1D-12P01611 117 aa2.24□□□□□ -2.05
SNHG1-222ENST00000545308 HBZP02008 142 aa2.24□□□□□ -2.05
SNHG1-222ENST00000545308 OPN1SWP03999 348 aa2.24□□□□□ -2.05
SNHG1-222ENST00000545308 CXCL2P19875 107 aa2.24□□□□□ -2.05
SNHG1-222ENST00000545308 BRS3P32247 399 aa2.24□□□□□ -2.05
SNHG1-222ENST00000545308 CD200P41217 278 aa2.24□□□□□ -2.05
SNHG1-222ENST00000545308 DNAJB13P59910 316 aa2.24□□□□□ -2.05
SNHG1-222ENST00000545308 ERVS71-1P61550 626 aa2.24□□□□□ -2.05
SNHG1-222ENST00000545308 RPL38P63173 70 aaKnown RBP2.24□□□□□ -2.05
SNHG1-222ENST00000545308 HBA1P69905 142 aa2.24□□□□□ -2.05
SNHG1-222ENST00000545308 PSG4Q00888 419 aa2.24□□□□□ -2.05
SNHG1-222ENST00000545308 SNCBQ16143 134 aa2.24□□□□□ -2.05
SNHG1-222ENST00000545308 ZFAND6Q6FIF0 208 aa2.24□□□□□ -2.05
SNHG1-222ENST00000545308 EBLN2Q6P2I7 272 aa2.24□□□□□ -2.05
SNHG1-222ENST00000545308 SCGB1D4Q6XE38 83 aa2.24□□□□□ -2.05
SNHG1-222ENST00000545308 ZCCHC23Q6ZST2 131 aa2.24□□□□□ -2.05
SNHG1-222ENST00000545308 CCDC121Q6ZUS5 278 aa2.24□□□□□ -2.05
SNHG1-222ENST00000545308 LRRC34Q8IZ02 419 aa2.24□□□□□ -2.05
SNHG1-222ENST00000545308 TMEM75Q8N9X5 138 aa2.24□□□□□ -2.05
SNHG1-222ENST00000545308 FER1L6-AS1Q8NA97 138 aa2.24□□□□□ -2.05
SNHG1-222ENST00000545308 OR9Q1Q8NGQ5 310 aa2.24□□□□□ -2.05
SNHG1-222ENST00000545308 OR5K1Q8NHB7 308 aa2.24□□□□□ -2.05
SNHG1-222ENST00000545308 ASB13Q8WXK3 278 aa2.24□□□□□ -2.05
SNHG1-222ENST00000545308 APOBEC3DQ96AK3 386 aaPredicted RBP2.24□□□□□ -2.05
SNHG1-222ENST00000545308 C12orf43Q96C57 262 aaKnown RBP2.24□□□□□ -2.05
SNHG1-222ENST00000545308 PYURFQ96I23 114 aa2.24□□□□□ -2.05
SNHG1-222ENST00000545308 TMEM216Q9P0N5 145 aa2.24□□□□□ -2.05
SNHG1-222ENST00000545308 ATPIF1Q9UII2 106 aa2.24□□□□□ -2.05
SNHG1-222ENST00000545308 EPPK1P58107 5090 aaKnown RBP2.23□□□□□ -2.05
SNHG1-222ENST00000545308 DNAH9Q9NYC9 4486 aa2.23□□□□□ -2.05
SNHG1-222ENST00000545308 OR6C6A6NF89 314 aa2.23□□□□□ -2.05
SNHG1-222ENST00000545308 IQCF6A8MYZ5 107 aa2.23□□□□□ -2.05
SNHG1-222ENST00000545308 C5orf58C9J3I9 102 aa2.23□□□□□ -2.05
SNHG1-222ENST00000545308 H3BMM0 161 aa2.23□□□□□ -2.05
SNHG1-222ENST00000545308 COPEO14579 308 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms