RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 RRAS2P62070 204 aaPredicted RBP11.59□□□□□ -0.55
CCDC78-216ENST00000544996 IFITM3Q01628 133 aa11.59□□□□□ -0.55
CCDC78-216ENST00000544996 NRARPQ7Z6K4 114 aa11.59□□□□□ -0.55
CCDC78-216ENST00000544996 RNF183Q96D59 192 aa11.59□□□□□ -0.55
CCDC78-216ENST00000544996 NPVFQ9HCQ7 196 aa11.59□□□□□ -0.55
CCDC78-216ENST00000544996 SEPSECSQ9HD40 501 aaKnown RBP11.59□□□□□ -0.55
CCDC78-216ENST00000544996 SLC45A2Q9UMX9 530 aa11.59□□□□□ -0.55
CCDC78-216ENST00000544996 NBEAL2Q6ZNJ1 2754 aa11.58□□□□□ -0.56
CCDC78-216ENST00000544996 K7EPK0 472 aa11.58□□□□□ -0.56
CCDC78-216ENST00000544996 ORM2P19652 201 aa11.58□□□□□ -0.56
CCDC78-216ENST00000544996 BCAP31P51572 246 aa11.58□□□□□ -0.56
CCDC78-216ENST00000544996 PSMG4Q5JS54 123 aa11.58□□□□□ -0.56
CCDC78-216ENST00000544996 OR8I2Q8N0Y5 310 aa11.58□□□□□ -0.56
CCDC78-216ENST00000544996 TMEM147Q9BVK8 224 aa11.58□□□□□ -0.56
CCDC78-216ENST00000544996 GGACTQ9BVM4 153 aa11.58□□□□□ -0.56
CCDC78-216ENST00000544996 INMT-MINDY4F8WBC2 141 aa11.57□□□□□ -0.56
CCDC78-216ENST00000544996 PRAF2O60831 178 aa11.57□□□□□ -0.56
CCDC78-216ENST00000544996 CCNKO75909 580 aa11.57□□□□□ -0.56
CCDC78-216ENST00000544996 GATA2P23769 480 aaPredicted RBP11.57□□□□□ -0.56
CCDC78-216ENST00000544996 CAV2P51636 162 aa11.57□□□□□ -0.56
CCDC78-216ENST00000544996 S100A10P60903 97 aa11.57□□□□□ -0.56
CCDC78-216ENST00000544996 SELENOTP62341 195 aa11.57□□□□□ -0.56
CCDC78-216ENST00000544996 ZFAND6Q6FIF0 208 aa11.57□□□□□ -0.56
CCDC78-216ENST00000544996 CYP2G1PQ6ZSU1 146 aa11.57□□□□□ -0.56
CCDC78-216ENST00000544996 OR1B1Q8NGR6 318 aa11.57□□□□□ -0.56
CCDC78-216ENST00000544996 CA1P00915 261 aaPredicted RBP11.56□□□□□ -0.56
CCDC78-216ENST00000544996 ID1P41134 155 aa11.56□□□□□ -0.56
CCDC78-216ENST00000544996 RAP2BP61225 183 aa11.56□□□□□ -0.56
CCDC78-216ENST00000544996 ACTL10Q5JWF8 245 aa11.56□□□□□ -0.56
CCDC78-216ENST00000544996 SAMD13Q5VXD3 122 aa11.56□□□□□ -0.56
CCDC78-216ENST00000544996 TEPPQ6URK8 271 aa11.56□□□□□ -0.56
CCDC78-216ENST00000544996 TMEM182Q6ZP80 229 aaPredicted RBP11.56□□□□□ -0.56
CCDC78-216ENST00000544996 S100A7AQ86SG5 101 aa11.56□□□□□ -0.56
CCDC78-216ENST00000544996 GATAD1Q8WUU5 269 aa11.56□□□□□ -0.56
CCDC78-216ENST00000544996 ZNF98A6NK75 572 aa11.55□□□□□ -0.56
CCDC78-216ENST00000544996 KNCNA6PVL3 124 aa11.55□□□□□ -0.56
CCDC78-216ENST00000544996 DEDDO75618 318 aa11.55□□□□□ -0.56
CCDC78-216ENST00000544996 GALR1P47211 349 aa11.55□□□□□ -0.56
CCDC78-216ENST00000544996 TMEM41BQ5BJD5 291 aa11.55□□□□□ -0.56
CCDC78-216ENST00000544996 MORN3Q6PF18 240 aaPredicted RBP11.55□□□□□ -0.56
CCDC78-216ENST00000544996 TRPT1Q86TN4 253 aaKnown RBP11.55□□□□□ -0.56
CCDC78-216ENST00000544996 GPR82Q96P67 336 aa11.55□□□□□ -0.56
CCDC78-216ENST00000544996 SLC25A22Q9H936 323 aa11.55□□□□□ -0.56
CCDC78-216ENST00000544996 GOSR2O14653 212 aa11.54□□□□□ -0.56
CCDC78-216ENST00000544996 HYPMO75409 117 aa11.54□□□□□ -0.56
CCDC78-216ENST00000544996 OR5G3P0C626 314 aa11.54□□□□□ -0.56
CCDC78-216ENST00000544996 LINC00869P0C866 280 aa11.54□□□□□ -0.56
CCDC78-216ENST00000544996 SPP1P10451 314 aa11.54□□□□□ -0.56
CCDC78-216ENST00000544996 PSMB3P49720 205 aa11.54□□□□□ -0.56
CCDC78-216ENST00000544996 ARL16Q0P5N6 197 aa11.54□□□□□ -0.56
CCDC78-216ENST00000544996 IL15RAQ13261 267 aa11.54□□□□□ -0.56
CCDC78-216ENST00000544996 TMEM217Q8N7C4 229 aa11.54□□□□□ -0.56
CCDC78-216ENST00000544996 RARRES2Q99969 163 aa11.54□□□□□ -0.56
CCDC78-216ENST00000544996 MARVELD1Q9BSK0 173 aa11.54□□□□□ -0.56
CCDC78-216ENST00000544996 DOK5Q9P104 306 aa11.54□□□□□ -0.56
CCDC78-216ENST00000544996 HIGD1AQ9Y241 93 aa11.54□□□□□ -0.56
CCDC78-216ENST00000544996 A0A0J9YWU9 116 aa11.53□□□□□ -0.56
CCDC78-216ENST00000544996 FAM24AA6NFZ4 105 aa11.53□□□□□ -0.56
CCDC78-216ENST00000544996 CST7O76096 145 aa11.53□□□□□ -0.56
CCDC78-216ENST00000544996 MEOX2P50222 304 aa11.53□□□□□ -0.56
CCDC78-216ENST00000544996 SLC38A11Q08AI6 406 aa11.53□□□□□ -0.56
CCDC78-216ENST00000544996 RAB31Q13636 194 aa11.53□□□□□ -0.56
CCDC78-216ENST00000544996 RAB32Q13637 225 aa11.53□□□□□ -0.56
CCDC78-216ENST00000544996 ZNF546Q86UE3 836 aa11.53□□□□□ -0.56
CCDC78-216ENST00000544996 STX12Q86Y82 276 aa11.53□□□□□ -0.56
CCDC78-216ENST00000544996 LINC00052Q96N35 136 aa11.53□□□□□ -0.56
CCDC78-216ENST00000544996 SLC25A32Q9H2D1 315 aa11.53□□□□□ -0.56
CCDC78-216ENST00000544996 C11orf1Q9H5F2 150 aa11.53□□□□□ -0.56
CCDC78-216ENST00000544996 LYRM2Q9NU23 88 aaPredicted RBP11.53□□□□□ -0.56
CCDC78-216ENST00000544996 RNF24Q9Y225 148 aa11.53□□□□□ -0.56
CCDC78-216ENST00000544996 ISLRO14498 428 aa11.52□□□□□ -0.57
CCDC78-216ENST00000544996 RLN2P04090 185 aa11.52□□□□□ -0.57
CCDC78-216ENST00000544996 SULT1A1P50225 295 aa11.52□□□□□ -0.57
CCDC78-216ENST00000544996 PLP1P60201 277 aa11.52□□□□□ -0.57
CCDC78-216ENST00000544996 NUTF2P61970 127 aaKnown RBP11.52□□□□□ -0.57
CCDC78-216ENST00000544996 CYCSP99999 105 aaKnown RBP11.52□□□□□ -0.57
CCDC78-216ENST00000544996 PXDC1Q5TGL8 231 aa11.52□□□□□ -0.57
CCDC78-216ENST00000544996 OR11H2Q8NH07 326 aa11.52□□□□□ -0.57
CCDC78-216ENST00000544996 SHANK2-AS3Q9BTD1 123 aa11.52□□□□□ -0.57
CCDC78-216ENST00000544996 RSG1Q9BU20 258 aa11.52□□□□□ -0.57
CCDC78-216ENST00000544996 SLC25A39Q9BZJ4 359 aaPredicted RBP11.52□□□□□ -0.57
CCDC78-216ENST00000544996 ARL6Q9H0F7 186 aa11.52□□□□□ -0.57
CCDC78-216ENST00000544996 AGPAT2O15120 278 aa11.51□□□□□ -0.57
CCDC78-216ENST00000544996 RPL7P18124 248 aaKnown RBP11.51□□□□□ -0.57
CCDC78-216ENST00000544996 S100A11P31949 105 aa11.51□□□□□ -0.57
CCDC78-216ENST00000544996 HBG1P69891 147 aa11.51□□□□□ -0.57
CCDC78-216ENST00000544996 HBG2P69892 147 aa11.51□□□□□ -0.57
CCDC78-216ENST00000544996 TMEM252Q8N6L7 170 aa11.51□□□□□ -0.57
CCDC78-216ENST00000544996 C16orf92Q96LL3 132 aa11.51□□□□□ -0.57
CCDC78-216ENST00000544996 SCRT1Q9BWW7 348 aa11.51□□□□□ -0.57
CCDC78-216ENST00000544996 NMES1Q9C002 83 aa11.51□□□□□ -0.57
CCDC78-216ENST00000544996 UQCC1Q9NVA1 299 aa11.51□□□□□ -0.57
CCDC78-216ENST00000544996 H3BRN7 92 aa11.5□□□□□ -0.57
CCDC78-216ENST00000544996 SOCS3O14543 225 aa11.5□□□□□ -0.57
CCDC78-216ENST00000544996 SSNA1O43805 119 aa11.5□□□□□ -0.57
CCDC78-216ENST00000544996 SIX6O95475 246 aa11.5□□□□□ -0.57
CCDC78-216ENST00000544996 ATF4P18848 351 aaPredicted RBP11.5□□□□□ -0.57
CCDC78-216ENST00000544996 C1QTNF4Q9BXJ3 329 aa11.5□□□□□ -0.57
CCDC78-216ENST00000544996 IGSF23A1L1A6 192 aa11.49□□□□□ -0.57
CCDC78-216ENST00000544996 H3BMM0 161 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms