RNA–Protein interactions for RNA: ENST00000544778.6

BPTF-208, Transcript of bromodomain PHD finger transcription factor, humanhuman

TSL 5

Gene BPTF, Length 7,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-208ENST00000544778 GSN-AS1Q9NRJ2 163 aa16.52■□□□□ 0.23
BPTF-208ENST00000544778 NDUFS5O43920 106 aa16.52■□□□□ 0.23
BPTF-208ENST00000544778 MGST2Q99735 147 aa16.52■□□□□ 0.23
BPTF-208ENST00000544778 FREM3P0C091 2139 aa16.51■□□□□ 0.23
BPTF-208ENST00000544778 PSG1P11464 419 aa16.51■□□□□ 0.23
BPTF-208ENST00000544778 TSKUQ8WUA8 353 aa16.51■□□□□ 0.23
BPTF-208ENST00000544778 TMEM170AQ8WVE7 144 aa16.51■□□□□ 0.23
BPTF-208ENST00000544778 OVOL2Q9BRP0 275 aa16.51■□□□□ 0.23
BPTF-208ENST00000544778 LRRK1Q38SD2 2015 aa16.51■□□□□ 0.23
BPTF-208ENST00000544778 PARP14Q460N5 1801 aa16.51■□□□□ 0.23
BPTF-208ENST00000544778 IGHV1-3A0A0C4DH29 117 aa16.51■□□□□ 0.23
BPTF-208ENST00000544778 VCYO14598 125 aa16.51■□□□□ 0.23
BPTF-208ENST00000544778 LYZL1Q6UWQ5 148 aa16.51■□□□□ 0.23
BPTF-208ENST00000544778 CD5P06127 495 aa16.51■□□□□ 0.23
BPTF-208ENST00000544778 C14orf178Q8N769 122 aaPredicted RBP16.51■□□□□ 0.23
BPTF-208ENST00000544778 RPUSD1Q9UJJ7 312 aaKnown RBP16.51■□□□□ 0.23
BPTF-208ENST00000544778 TRAV25A0A0B4J276 109 aa16.51■□□□□ 0.23
BPTF-208ENST00000544778 PRIMA1Q86XR5 153 aa16.51■□□□□ 0.23
BPTF-208ENST00000544778 ZNF319Q9P2F9 582 aa16.51■□□□□ 0.23
BPTF-208ENST00000544778 ZNF138P52744 262 aa16.51■□□□□ 0.23
BPTF-208ENST00000544778 DAD1P61803 113 aa16.51■□□□□ 0.23
BPTF-208ENST00000544778 DOCK11Q5JSL3 2073 aa16.5■□□□□ 0.23
BPTF-208ENST00000544778 H3BMM0 161 aa16.5■□□□□ 0.23
BPTF-208ENST00000544778 DUTP33316 252 aaKnown RBP16.5■□□□□ 0.23
BPTF-208ENST00000544778 HSD52Q0P140 79 aa16.5■□□□□ 0.23
BPTF-208ENST00000544778 LINC01356Q8N9X3 169 aa16.5■□□□□ 0.23
BPTF-208ENST00000544778 UBE2WQ96B02 151 aa16.5■□□□□ 0.23
BPTF-208ENST00000544778 DOCK6Q96HP0 2047 aa16.5■□□□□ 0.23
BPTF-208ENST00000544778 SH2D1AO60880 128 aa16.5■□□□□ 0.23
BPTF-208ENST00000544778 LYZL4Q96KX0 146 aa16.5■□□□□ 0.23
BPTF-208ENST00000544778 MSRB2Q9Y3D2 182 aa16.5■□□□□ 0.23
BPTF-208ENST00000544778 Q8TAT8 98 aa16.5■□□□□ 0.23
BPTF-208ENST00000544778 FAM110DQ8TAY7 271 aaPredicted RBP16.5■□□□□ 0.23
BPTF-208ENST00000544778 C20orf204Q6ZNR8 217 aa16.49■□□□□ 0.23
BPTF-208ENST00000544778 C10orf55Q5SWW7 151 aa16.49■□□□□ 0.23
BPTF-208ENST00000544778 A0A1W2PRE2 83 aa16.49■□□□□ 0.23
BPTF-208ENST00000544778 MRAPQ8TCY5 172 aa16.49■□□□□ 0.23
BPTF-208ENST00000544778 DOCK4Q8N1I0 1966 aa16.49■□□□□ 0.23
BPTF-208ENST00000544778 FAM90A2PQ658T7 463 aa16.49■□□□□ 0.23
BPTF-208ENST00000544778 PINLYPA6NC86 204 aa16.49■□□□□ 0.23
BPTF-208ENST00000544778 LCN12Q6JVE5 192 aa16.49■□□□□ 0.23
BPTF-208ENST00000544778 IGHV1-8P0DP01 117 aa16.48■□□□□ 0.23
BPTF-208ENST00000544778 MYMXA0A1B0GTQ4 84 aa16.48■□□□□ 0.23
BPTF-208ENST00000544778 KLF17Q5JT82 389 aaPredicted RBP16.48■□□□□ 0.23
BPTF-208ENST00000544778 SEC11AP67812 179 aa16.48■□□□□ 0.23
BPTF-208ENST00000544778 TIMM21Q9BVV7 248 aa16.48■□□□□ 0.23
BPTF-208ENST00000544778 IGHV3-16A0A0C4DH30 117 aa16.47■□□□□ 0.23
BPTF-208ENST00000544778 CD5LO43866 347 aa16.47■□□□□ 0.23
BPTF-208ENST00000544778 TNFRSF14Q92956 283 aa16.47■□□□□ 0.23
BPTF-208ENST00000544778 MAPK1IP1LQ8NDC0 245 aa16.47■□□□□ 0.23
BPTF-208ENST00000544778 LINC00477Q96M19 166 aa16.47■□□□□ 0.23
BPTF-208ENST00000544778 ARFGEF3Q5TH69 2177 aa16.47■□□□□ 0.23
BPTF-208ENST00000544778 DOCK10Q96BY6 2186 aa16.47■□□□□ 0.23
BPTF-208ENST00000544778 CFHR1Q03591 330 aa16.47■□□□□ 0.23
BPTF-208ENST00000544778 LINC00271P0C7V0 271 aa16.47■□□□□ 0.23
BPTF-208ENST00000544778 SYNJ2BPP57105 145 aa16.47■□□□□ 0.23
BPTF-208ENST00000544778 BCL6BQ8N143 479 aaPredicted RBP16.46■□□□□ 0.23
BPTF-208ENST00000544778 CARHSP1Q9Y2V2 147 aaKnown RBP16.46■□□□□ 0.23
BPTF-208ENST00000544778 EIF4EBP2Q13542 120 aaPredicted RBP16.46■□□□□ 0.23
BPTF-208ENST00000544778 LINC01549A6NIU2 74 aa16.46■□□□□ 0.23
BPTF-208ENST00000544778 FBLIM1Q8WUP2 373 aa16.46■□□□□ 0.23
BPTF-208ENST00000544778 MINOS1Q5TGZ0 78 aa16.46■□□□□ 0.22
BPTF-208ENST00000544778 MINOS1-NBL1R4GNA1 71 aa16.46■□□□□ 0.22
BPTF-208ENST00000544778 SMPXQ9UHP9 88 aa16.45■□□□□ 0.22
BPTF-208ENST00000544778 TMEM178BH3BS89 294 aa16.45■□□□□ 0.22
BPTF-208ENST00000544778 RNF223E7ERA6 249 aa16.45■□□□□ 0.22
BPTF-208ENST00000544778 RASL11AQ6T310 242 aa16.45■□□□□ 0.22
BPTF-208ENST00000544778 SMKR1H3BMG3 65 aa16.45■□□□□ 0.22
BPTF-208ENST00000544778 SELLP14151 372 aa16.45■□□□□ 0.22
BPTF-208ENST00000544778 SPATA31B1PQ5VZV4 182 aa16.45■□□□□ 0.22
BPTF-208ENST00000544778 A6NNC1 897 aa16.45■□□□□ 0.22
BPTF-208ENST00000544778 C22orf46C9J442 243 aa16.44■□□□□ 0.22
BPTF-208ENST00000544778 USMG5Q96IX5 58 aa16.44■□□□□ 0.22
BPTF-208ENST00000544778 FAM223BA6NKX1 122 aa16.44■□□□□ 0.22
BPTF-208ENST00000544778 SRSF3P84103 164 aaKnown RBP16.44■□□□□ 0.22
BPTF-208ENST00000544778 FAM223AQ8IWN6 122 aa16.44■□□□□ 0.22
BPTF-208ENST00000544778 GREM1O60565 184 aa16.44■□□□□ 0.22
BPTF-208ENST00000544778 ARID2Q68CP9 1835 aa16.44■□□□□ 0.22
BPTF-208ENST00000544778 PFN2P35080 140 aa16.44■□□□□ 0.22
BPTF-208ENST00000544778 TIMP3P35625 211 aa16.44■□□□□ 0.22
BPTF-208ENST00000544778 PMVKQ15126 192 aa16.44■□□□□ 0.22
BPTF-208ENST00000544778 VSIRQ9H7M9 311 aa16.44■□□□□ 0.22
BPTF-208ENST00000544778 BMPERQ8N8U9 685 aa16.44■□□□□ 0.22
BPTF-208ENST00000544778 PSPNO60542 156 aa16.43■□□□□ 0.22
BPTF-208ENST00000544778 XCL2Q9UBD3 114 aa16.43■□□□□ 0.22
BPTF-208ENST00000544778 GUSBP1Q15486 140 aa16.43■□□□□ 0.22
BPTF-208ENST00000544778 DOPEY2Q9Y3R5 2298 aa16.43■□□□□ 0.22
BPTF-208ENST00000544778 hDV102S1A0JD36 115 aa16.43■□□□□ 0.22
BPTF-208ENST00000544778 DKK1O94907 266 aa16.43■□□□□ 0.22
BPTF-208ENST00000544778 DEFB131AP59861 70 aa16.43■□□□□ 0.22
BPTF-208ENST00000544778 TNFSF13O75888 250 aa16.43■□□□□ 0.22
BPTF-208ENST00000544778 A0A0G2JNJ9 132 aa16.43■□□□□ 0.22
BPTF-208ENST00000544778 TMEM158Q8WZ71 300 aa16.43■□□□□ 0.22
BPTF-208ENST00000544778 Q9UFV3 132 aa16.43■□□□□ 0.22
BPTF-208ENST00000544778 PHF3Q92576 2039 aaKnown RBP16.43■□□□□ 0.22
BPTF-208ENST00000544778 FGFBP3Q8TAT2 258 aa16.42■□□□□ 0.22
BPTF-208ENST00000544778 GAGE12JA6NER3 117 aa16.42■□□□□ 0.22
BPTF-208ENST00000544778 CSRP1P21291 193 aaKnown RBP16.42■□□□□ 0.22
BPTF-208ENST00000544778 GAGE1Q13065 139 aa16.42■□□□□ 0.22
BPTF-208ENST00000544778 GAGE4Q13068 117 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms