RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-222ENST00000544585 PAFAH1B2P68402 229 aa4.32□□□□□ -1.72
CPSF7-222ENST00000544585 ZNF846Q147U1 533 aa4.32□□□□□ -1.72
CPSF7-222ENST00000544585 ARL6IP1Q15041 203 aa4.32□□□□□ -1.72
CPSF7-222ENST00000544585 OR10K2Q6IF99 312 aa4.32□□□□□ -1.72
CPSF7-222ENST00000544585 UNQ9165/PRO28630Q6UXU0 137 aa4.32□□□□□ -1.72
CPSF7-222ENST00000544585 MS4A15Q8N5U1 240 aa4.32□□□□□ -1.72
CPSF7-222ENST00000544585 S100ZQ8WXG8 99 aa4.32□□□□□ -1.72
CPSF7-222ENST00000544585 CYYR1Q96J86 154 aa4.32□□□□□ -1.72
CPSF7-222ENST00000544585 PGLYRP3Q96LB9 341 aa4.32□□□□□ -1.72
CPSF7-222ENST00000544585 DERL3Q96Q80 235 aa4.32□□□□□ -1.72
CPSF7-222ENST00000544585 OR2A7Q96R45 310 aa4.32□□□□□ -1.72
CPSF7-222ENST00000544585 NICN1Q9BSH3 213 aa4.32□□□□□ -1.72
CPSF7-222ENST00000544585 ZNF436Q9C0F3 470 aaPredicted RBP4.32□□□□□ -1.72
CPSF7-222ENST00000544585 LPAR5Q9H1C0 372 aa4.32□□□□□ -1.72
CPSF7-222ENST00000544585 C12orf4Q9NQ89 552 aa4.32□□□□□ -1.72
CPSF7-222ENST00000544585 DAZ1Q9NQZ3 744 aaKnown RBP4.32□□□□□ -1.72
CPSF7-222ENST00000544585 SCN3BQ9NY72 215 aa4.32□□□□□ -1.72
CPSF7-222ENST00000544585 IGLV11-55A0A075B6I3 123 aa4.31□□□□□ -1.72
CPSF7-222ENST00000544585 BET1O15155 118 aa4.31□□□□□ -1.72
CPSF7-222ENST00000544585 DEFB4AO15263 64 aa4.31□□□□□ -1.72
CPSF7-222ENST00000544585 FABP7O15540 132 aa4.31□□□□□ -1.72
CPSF7-222ENST00000544585 TGOLN2O43493 480 aa4.31□□□□□ -1.72
CPSF7-222ENST00000544585 ZNF253O75346 499 aa4.31□□□□□ -1.72
CPSF7-222ENST00000544585 HRASP01112 189 aa4.31□□□□□ -1.72
CPSF7-222ENST00000544585 IGKV3-20P01619 116 aa4.31□□□□□ -1.72
CPSF7-222ENST00000544585 CDK1P06493 297 aa4.31□□□□□ -1.72
CPSF7-222ENST00000544585 CTSDP07339 412 aaPredicted RBP4.31□□□□□ -1.72
CPSF7-222ENST00000544585 SAA1P0DJI8 122 aaPredicted RBP4.31□□□□□ -1.72
CPSF7-222ENST00000544585 MIFP14174 115 aa4.31□□□□□ -1.72
CPSF7-222ENST00000544585 PGAM2P15259 253 aa4.31□□□□□ -1.72
CPSF7-222ENST00000544585 CELP19835 753 aa4.31□□□□□ -1.72
CPSF7-222ENST00000544585 NPY1RP25929 384 aa4.31□□□□□ -1.72
CPSF7-222ENST00000544585 HLA-DMBP28068 263 aa4.31□□□□□ -1.72
CPSF7-222ENST00000544585 ARPC4P59998 168 aa4.31□□□□□ -1.72
CPSF7-222ENST00000544585 QRFPP83859 136 aa4.31□□□□□ -1.72
CPSF7-222ENST00000544585 ARFRP1Q13795 201 aa4.31□□□□□ -1.72
CPSF7-222ENST00000544585 RGS21Q2M5E4 152 aa4.31□□□□□ -1.72
CPSF7-222ENST00000544585 ACOT7LQ6ZUV0 252 aa4.31□□□□□ -1.72
CPSF7-222ENST00000544585 APRG1Q8IVJ8 170 aa4.31□□□□□ -1.72
CPSF7-222ENST00000544585 TMEM167AQ8TBQ9 72 aa4.31□□□□□ -1.72
CPSF7-222ENST00000544585 ZNF502Q8TBZ5 544 aa4.31□□□□□ -1.72
CPSF7-222ENST00000544585 GINS4Q9BRT9 223 aa4.31□□□□□ -1.72
CPSF7-222ENST00000544585 HDHD3Q9BSH5 251 aaPredicted RBP4.31□□□□□ -1.72
CPSF7-222ENST00000544585 DUSP21Q9H596 190 aa4.31□□□□□ -1.72
CPSF7-222ENST00000544585 CLEC2DQ9UHP7 191 aa4.31□□□□□ -1.72
CPSF7-222ENST00000544585 TBC1D24Q9ULP9 559 aa4.31□□□□□ -1.72
CPSF7-222ENST00000544585 S4R3C0 116 aa4.31□□□□□ -1.72
CPSF7-222ENST00000544585 EFCAB10A6NFE3 127 aa4.3□□□□□ -1.72
CPSF7-222ENST00000544585 E7EUB6 86 aa4.3□□□□□ -1.72
CPSF7-222ENST00000544585 GABARAPO95166 117 aa4.3□□□□□ -1.72
CPSF7-222ENST00000544585 IFNA10P01566 189 aa4.3□□□□□ -1.72
CPSF7-222ENST00000544585 CD3GP09693 182 aa4.3□□□□□ -1.72
CPSF7-222ENST00000544585 CTXN2P0C2S0 81 aa4.3□□□□□ -1.72
CPSF7-222ENST00000544585 RBMY1CP0DJD4 496 aa4.3□□□□□ -1.72
CPSF7-222ENST00000544585 UNC119Q13432 240 aa4.3□□□□□ -1.72
CPSF7-222ENST00000544585 MRPL23Q16540 153 aaKnown RBP4.3□□□□□ -1.72
CPSF7-222ENST00000544585 ACSM3Q53FZ2 586 aa4.3□□□□□ -1.72
CPSF7-222ENST00000544585 C10orf55Q5SWW7 151 aa4.3□□□□□ -1.72
CPSF7-222ENST00000544585 THOC7Q6I9Y2 204 aaKnown RBP4.3□□□□□ -1.72
CPSF7-222ENST00000544585 C2orf66Q6UXQ4 117 aa4.3□□□□□ -1.72
CPSF7-222ENST00000544585 PUSL1Q8N0Z8 303 aaKnown RBP4.3□□□□□ -1.72
CPSF7-222ENST00000544585 ZNF645Q8N7E2 425 aa4.3□□□□□ -1.72
CPSF7-222ENST00000544585 ZFP41Q8N8Y5 198 aa4.3□□□□□ -1.72
CPSF7-222ENST00000544585 ZNF485Q8NCK3 441 aa4.3□□□□□ -1.72
CPSF7-222ENST00000544585 BPIFB6Q8NFQ5 453 aa4.3□□□□□ -1.72
CPSF7-222ENST00000544585 APH1BQ8WW43 257 aa4.3□□□□□ -1.72
CPSF7-222ENST00000544585 ARHGAP5-AS1Q96IT6 56 aa4.3□□□□□ -1.72
CPSF7-222ENST00000544585 PECRQ9BY49 303 aa4.3□□□□□ -1.72
CPSF7-222ENST00000544585 CCDC90BQ9GZT6 254 aa4.3□□□□□ -1.72
CPSF7-222ENST00000544585 NAA50Q9GZZ1 169 aaKnown RBP4.3□□□□□ -1.72
CPSF7-222ENST00000544585 RHBDL2Q9NX52 303 aa4.3□□□□□ -1.72
CPSF7-222ENST00000544585 SMPXQ9UHP9 88 aa4.3□□□□□ -1.72
CPSF7-222ENST00000544585 PAIP2BQ9ULR5 123 aaKnown RBP4.3□□□□□ -1.72
CPSF7-222ENST00000544585 DEFB131BA0A096LNP1 70 aa4.29□□□□□ -1.72
CPSF7-222ENST00000544585 TRAV14DV4A0A0A6YYC5 116 aa4.29□□□□□ -1.72
CPSF7-222ENST00000544585 IGHV3-35A0A0C4DH35 117 aa4.29□□□□□ -1.72
CPSF7-222ENST00000544585 S1PR2O95136 353 aa4.29□□□□□ -1.72
CPSF7-222ENST00000544585 DUSP14O95147 198 aaKnown RBP4.29□□□□□ -1.72
CPSF7-222ENST00000544585 GATA1P15976 413 aaPredicted RBP4.29□□□□□ -1.72
CPSF7-222ENST00000544585 CD36P16671 472 aa4.29□□□□□ -1.72
CPSF7-222ENST00000544585 CDKN1BP46527 198 aa4.29□□□□□ -1.72
CPSF7-222ENST00000544585 ASAH1Q13510 395 aa4.29□□□□□ -1.72
CPSF7-222ENST00000544585 RNF212Q495C1 297 aa4.29□□□□□ -1.72
CPSF7-222ENST00000544585 C1orf134Q5TEV5 83 aa4.29□□□□□ -1.72
CPSF7-222ENST00000544585 LAIR2Q6ISS4 152 aa4.29□□□□□ -1.72
CPSF7-222ENST00000544585 Q6ZTC4 211 aa4.29□□□□□ -1.72
CPSF7-222ENST00000544585 Q8NAQ8 132 aa4.29□□□□□ -1.72
CPSF7-222ENST00000544585 DUSP18Q8NEJ0 188 aa4.29□□□□□ -1.72
CPSF7-222ENST00000544585 YIPF6Q96EC8 236 aa4.29□□□□□ -1.72
CPSF7-222ENST00000544585 FAM210BQ96KR6 192 aa4.29□□□□□ -1.72
CPSF7-222ENST00000544585 RHPN1-AS1Q9BWJ2 59 aa4.29□□□□□ -1.72
CPSF7-222ENST00000544585 IGHV7-4-1A0A0J9YVY3 117 aa4.28□□□□□ -1.72
CPSF7-222ENST00000544585 PNMA8CA0A1B0GUJ8 204 aa4.28□□□□□ -1.72
CPSF7-222ENST00000544585 A0A1B0GW64 132 aa4.28□□□□□ -1.72
CPSF7-222ENST00000544585 OR2T8A6NH00 312 aa4.28□□□□□ -1.72
CPSF7-222ENST00000544585 C16orf90A8MZG2 172 aa4.28□□□□□ -1.72
CPSF7-222ENST00000544585 DNASE2O00115 360 aaPredicted RBP4.28□□□□□ -1.72
CPSF7-222ENST00000544585 HLA-DQB1P01920 261 aa4.28□□□□□ -1.72
CPSF7-222ENST00000544585 RBMY1A1P0DJD3 496 aaKnown RBP4.28□□□□□ -1.72
CPSF7-222ENST00000544585 HLA-GP17693 338 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms