RNA–Protein interactions for RNA: ENST00000544584.1

CLSTN3-215, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-215ENST00000544584 ODF3L2Q3SX64 289 aa4.17□□□□□ -1.74
CLSTN3-215ENST00000544584 FAM90A2PQ658T7 463 aa4.17□□□□□ -1.74
CLSTN3-215ENST00000544584 TEPPQ6URK8 271 aa4.17□□□□□ -1.74
CLSTN3-215ENST00000544584 C16orf54Q6UWD8 224 aa4.17□□□□□ -1.74
CLSTN3-215ENST00000544584 Q6ZRG5 221 aa4.17□□□□□ -1.74
CLSTN3-215ENST00000544584 C12orf45Q8N5I9 185 aaPredicted RBP4.17□□□□□ -1.74
CLSTN3-215ENST00000544584 OR4D5Q8NGN0 318 aa4.17□□□□□ -1.74
CLSTN3-215ENST00000544584 OR1B1Q8NGR6 318 aa4.17□□□□□ -1.74
CLSTN3-215ENST00000544584 LRRC20Q8TCA0 184 aa4.17□□□□□ -1.74
CLSTN3-215ENST00000544584 ZNF431Q8TF32 576 aaPredicted RBP4.17□□□□□ -1.74
CLSTN3-215ENST00000544584 RNF183Q96D59 192 aa4.17□□□□□ -1.74
CLSTN3-215ENST00000544584 ZNF414Q96IQ9 312 aa4.17□□□□□ -1.74
CLSTN3-215ENST00000544584 RARRES2Q99969 163 aa4.17□□□□□ -1.74
CLSTN3-215ENST00000544584 MAGT1Q9H0U3 335 aa4.17□□□□□ -1.74
CLSTN3-215ENST00000544584 MAP6D1Q9H9H5 199 aa4.17□□□□□ -1.74
CLSTN3-215ENST00000544584 NUDT15Q9NV35 164 aa4.17□□□□□ -1.74
CLSTN3-215ENST00000544584 PTTG2Q9NZH5 202 aa4.17□□□□□ -1.74
CLSTN3-215ENST00000544584 ELOA3CA0A087WX78 387 aaPredicted RBP4.16□□□□□ -1.74
CLSTN3-215ENST00000544584 IGHV3-66A0A0C4DH42 116 aa4.16□□□□□ -1.74
CLSTN3-215ENST00000544584 TEX48A0A1B0GUV7 120 aa4.16□□□□□ -1.74
CLSTN3-215ENST00000544584 CXorf65A6NEN9 183 aa4.16□□□□□ -1.74
CLSTN3-215ENST00000544584 K7EQG2 157 aa4.16□□□□□ -1.74
CLSTN3-215ENST00000544584 ISLRO14498 428 aa4.16□□□□□ -1.74
CLSTN3-215ENST00000544584 MIFP14174 115 aa4.16□□□□□ -1.74
CLSTN3-215ENST00000544584 ANXA7P20073 488 aaKnown RBP4.16□□□□□ -1.74
CLSTN3-215ENST00000544584 S100A11P31949 105 aa4.16□□□□□ -1.74
CLSTN3-215ENST00000544584 PSMB3P49720 205 aa4.16□□□□□ -1.74
CLSTN3-215ENST00000544584 CAV2P51636 162 aa4.16□□□□□ -1.74
CLSTN3-215ENST00000544584 POLR2GP62487 172 aaKnown RBP eCLIP4.16□□□□□ -1.74
CLSTN3-215ENST00000544584 ASAH1Q13510 395 aa4.16□□□□□ -1.74
CLSTN3-215ENST00000544584 MLANAQ16655 118 aa4.16□□□□□ -1.74
CLSTN3-215ENST00000544584 ATP6V1FQ16864 119 aa4.16□□□□□ -1.74
CLSTN3-215ENST00000544584 DEFB135Q30KP9 77 aa4.16□□□□□ -1.74
CLSTN3-215ENST00000544584 PSMG4Q5JS54 123 aa4.16□□□□□ -1.74
CLSTN3-215ENST00000544584 ZNF546Q86UE3 836 aa4.16□□□□□ -1.74
CLSTN3-215ENST00000544584 APRG1Q8IVJ8 170 aa4.16□□□□□ -1.74
CLSTN3-215ENST00000544584 LILRB2Q8N423 598 aa4.16□□□□□ -1.74
CLSTN3-215ENST00000544584 THAP8Q8NA92 274 aa4.16□□□□□ -1.74
CLSTN3-215ENST00000544584 ZBTB8BQ8NAP8 495 aaPredicted RBP4.16□□□□□ -1.74
CLSTN3-215ENST00000544584 C16orf92Q96LL3 132 aa4.16□□□□□ -1.74
CLSTN3-215ENST00000544584 C2orf50Q96LR7 162 aa4.16□□□□□ -1.74
CLSTN3-215ENST00000544584 OVOL2Q9BRP0 275 aa4.16□□□□□ -1.74
CLSTN3-215ENST00000544584 SLC25A31Q9H0C2 315 aa4.16□□□□□ -1.74
CLSTN3-215ENST00000544584 KCNIP2Q9NS61 270 aa4.16□□□□□ -1.74
CLSTN3-215ENST00000544584 RPRMQ9NS64 109 aa4.16□□□□□ -1.74
CLSTN3-215ENST00000544584 PPP1R14DQ9NXH3 145 aa4.16□□□□□ -1.74
CLSTN3-215ENST00000544584 CLEC5AQ9NY25 188 aa4.16□□□□□ -1.74
CLSTN3-215ENST00000544584 PRR13Q9NZ81 148 aa4.16□□□□□ -1.74
CLSTN3-215ENST00000544584 FLVCR2Q9UPI3 526 aa4.16□□□□□ -1.74
CLSTN3-215ENST00000544584 HIGD1AQ9Y241 93 aa4.16□□□□□ -1.74
CLSTN3-215ENST00000544584 U3KQE9 123 aa4.16□□□□□ -1.74
CLSTN3-215ENST00000544584 KIAA1109Q2LD37 5005 aa4.16□□□□□ -1.74
CLSTN3-215ENST00000544584 TRAV6A0A075B6T7 132 aa4.15□□□□□ -1.75
CLSTN3-215ENST00000544584 TMEM189A5PLL7 270 aa4.15□□□□□ -1.75
CLSTN3-215ENST00000544584 C11orf94C9JXX5 98 aa4.15□□□□□ -1.75
CLSTN3-215ENST00000544584 MPDU1O75352 247 aa4.15□□□□□ -1.75
CLSTN3-215ENST00000544584 DEDDO75618 318 aa4.15□□□□□ -1.75
CLSTN3-215ENST00000544584 ADAP1O75689 374 aa4.15□□□□□ -1.75
CLSTN3-215ENST00000544584 DUSP14O95147 198 aaKnown RBP4.15□□□□□ -1.75
CLSTN3-215ENST00000544584 AMBPP02760 352 aa4.15□□□□□ -1.75
CLSTN3-215ENST00000544584 OR5G3P0C626 314 aa4.15□□□□□ -1.75
CLSTN3-215ENST00000544584 ZNF688P0C7X2 276 aa4.15□□□□□ -1.75
CLSTN3-215ENST00000544584 ORM2P19652 201 aa4.15□□□□□ -1.75
CLSTN3-215ENST00000544584 EDN2P20800 178 aa4.15□□□□□ -1.75
CLSTN3-215ENST00000544584 S100A10P60903 97 aa4.15□□□□□ -1.75
CLSTN3-215ENST00000544584 B2MP61769 119 aa4.15□□□□□ -1.75
CLSTN3-215ENST00000544584 ACTL10Q5JWF8 245 aa4.15□□□□□ -1.75
CLSTN3-215ENST00000544584 FOXI2Q6ZQN5 318 aa4.15□□□□□ -1.75
CLSTN3-215ENST00000544584 CYP2G1PQ6ZSU1 146 aa4.15□□□□□ -1.75
CLSTN3-215ENST00000544584 OR1L4Q8NGR5 311 aa4.15□□□□□ -1.75
CLSTN3-215ENST00000544584 OR11H2Q8NH07 326 aa4.15□□□□□ -1.75
CLSTN3-215ENST00000544584 DCANP1Q8TF63 244 aa4.15□□□□□ -1.75
CLSTN3-215ENST00000544584 GLMPQ8WWB7 406 aa4.15□□□□□ -1.75
CLSTN3-215ENST00000544584 PFDN5Q99471 154 aa4.15□□□□□ -1.75
CLSTN3-215ENST00000544584 WFDC10AQ9H1F0 79 aa4.15□□□□□ -1.75
CLSTN3-215ENST00000544584 C11orf68Q9H3H3 251 aaKnown RBP4.15□□□□□ -1.75
CLSTN3-215ENST00000544584 EDA2RQ9HAV5 297 aa4.15□□□□□ -1.75
CLSTN3-215ENST00000544584 SMIM9A6NGZ8 99 aa4.14□□□□□ -1.75
CLSTN3-215ENST00000544584 ZNF98A6NK75 572 aa4.14□□□□□ -1.75
CLSTN3-215ENST00000544584 H3BP45 60 aa4.14□□□□□ -1.75
CLSTN3-215ENST00000544584 PLA2G10O15496 165 aa4.14□□□□□ -1.75
CLSTN3-215ENST00000544584 SSNA1O43805 119 aa4.14□□□□□ -1.75
CLSTN3-215ENST00000544584 COX7A2P2O60397 106 aa4.14□□□□□ -1.75
CLSTN3-215ENST00000544584 UPK1BO75841 260 aa4.14□□□□□ -1.75
CLSTN3-215ENST00000544584 APOHP02749 345 aaPredicted RBP4.14□□□□□ -1.75
CLSTN3-215ENST00000544584 METTL15P1P0C7V9 234 aa4.14□□□□□ -1.75
CLSTN3-215ENST00000544584 LINC00869P0C866 280 aa4.14□□□□□ -1.75
CLSTN3-215ENST00000544584 CXCL2P19875 107 aa4.14□□□□□ -1.75
CLSTN3-215ENST00000544584 BTCP35070 178 aa4.14□□□□□ -1.75
CLSTN3-215ENST00000544584 SULT1A1P50225 295 aa4.14□□□□□ -1.75
CLSTN3-215ENST00000544584 TCTAP57738 103 aa4.14□□□□□ -1.75
CLSTN3-215ENST00000544584 PLP1P60201 277 aa4.14□□□□□ -1.75
CLSTN3-215ENST00000544584 ZNF90Q03938 601 aa4.14□□□□□ -1.75
CLSTN3-215ENST00000544584 OR2F1Q13607 317 aa4.14□□□□□ -1.75
CLSTN3-215ENST00000544584 USF2Q15853 346 aaPredicted RBP4.14□□□□□ -1.75
CLSTN3-215ENST00000544584 LEMD1Q68G75 181 aa4.14□□□□□ -1.75
CLSTN3-215ENST00000544584 TMEM14EPQ6UXP3 125 aa4.14□□□□□ -1.75
CLSTN3-215ENST00000544584 ACOT7LQ6ZUV0 252 aa4.14□□□□□ -1.75
CLSTN3-215ENST00000544584 BPIFA4PQ86YQ2 179 aa4.14□□□□□ -1.75
CLSTN3-215ENST00000544584 ZNF709Q8N972 641 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms