RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 GGTLC1Q9BX51 225 aa11.28□□□□□ -0.6
CD9-210ENST00000543916 C19orf73Q9NVV2 129 aa11.28□□□□□ -0.6
CD9-210ENST00000543916 DOK5Q9P104 306 aa11.28□□□□□ -0.6
CD9-210ENST00000543916 PRKDCP78527 4128 aaKnown RBP11.28□□□□□ -0.6
CD9-210ENST00000543916 OR4C46A6NHA9 309 aa11.27□□□□□ -0.61
CD9-210ENST00000543916 G3V3Q6 166 aa11.27□□□□□ -0.61
CD9-210ENST00000543916 CD5P06127 495 aa11.27□□□□□ -0.61
CD9-210ENST00000543916 IGHV4-30-4P0DP06 118 aa11.27□□□□□ -0.61
CD9-210ENST00000543916 FGF7P21781 194 aa11.27□□□□□ -0.61
CD9-210ENST00000543916 CAMLGP49069 296 aa11.27□□□□□ -0.61
CD9-210ENST00000543916 PLP1P60201 277 aa11.27□□□□□ -0.61
CD9-210ENST00000543916 RPL11P62913 178 aaKnown RBP11.27□□□□□ -0.61
CD9-210ENST00000543916 FGL1Q08830 312 aa11.27□□□□□ -0.61
CD9-210ENST00000543916 OR2T35Q8NGX2 323 aa11.27□□□□□ -0.61
CD9-210ENST00000543916 MS4A6AQ9H2W1 248 aa11.27□□□□□ -0.61
CD9-210ENST00000543916 NUP62P37198 522 aaPredicted RBP11.26□□□□□ -0.61
CD9-210ENST00000543916 RAB31Q13636 194 aa11.26□□□□□ -0.61
CD9-210ENST00000543916 ODF3L2Q3SX64 289 aa11.26□□□□□ -0.61
CD9-210ENST00000543916 PATE2Q6UY27 113 aa11.26□□□□□ -0.61
CD9-210ENST00000543916 DEFB125Q8N687 156 aa11.26□□□□□ -0.61
CD9-210ENST00000543916 PPP1R14BQ96C90 147 aa11.26□□□□□ -0.61
CD9-210ENST00000543916 SMIM3Q9BZL3 60 aa11.26□□□□□ -0.61
CD9-210ENST00000543916 ARL6Q9H0F7 186 aa11.26□□□□□ -0.61
CD9-210ENST00000543916 UBQLN2Q9UHD9 624 aa11.26□□□□□ -0.61
CD9-210ENST00000543916 OR11H12B2RN74 326 aa11.25□□□□□ -0.61
CD9-210ENST00000543916 H3BRN7 92 aa11.25□□□□□ -0.61
CD9-210ENST00000543916 HYPMO75409 117 aa11.25□□□□□ -0.61
CD9-210ENST00000543916 PRR20EP86478 221 aa11.25□□□□□ -0.61
CD9-210ENST00000543916 PRR20CP86479 221 aa11.25□□□□□ -0.61
CD9-210ENST00000543916 PRR20DP86480 221 aa11.25□□□□□ -0.61
CD9-210ENST00000543916 PRR20BP86481 221 aa11.25□□□□□ -0.61
CD9-210ENST00000543916 PRR20AP86496 221 aa11.25□□□□□ -0.61
CD9-210ENST00000543916 OPCMLQ14982 345 aa11.25□□□□□ -0.61
CD9-210ENST00000543916 MIC13Q5XKP0 118 aa11.25□□□□□ -0.61
CD9-210ENST00000543916 Q6ZNX1 250 aa11.25□□□□□ -0.61
CD9-210ENST00000543916 WFDC3Q8IUB2 231 aa11.25□□□□□ -0.61
CD9-210ENST00000543916 FAM24BQ8N5W8 94 aa11.25□□□□□ -0.61
CD9-210ENST00000543916 STXBP6Q8NFX7 210 aa11.25□□□□□ -0.61
CD9-210ENST00000543916 UHRF2Q96PU4 802 aa11.25□□□□□ -0.61
CD9-210ENST00000543916 ATP5SQ99766 215 aa11.25□□□□□ -0.61
CD9-210ENST00000543916 SCRT1Q9BWW7 348 aa11.25□□□□□ -0.61
CD9-210ENST00000543916 PFDN2Q9UHV9 154 aa11.25□□□□□ -0.61
CD9-210ENST00000543916 HIGD1AQ9Y241 93 aa11.25□□□□□ -0.61
CD9-210ENST00000543916 TRAV2A0A0B4J234 112 aa11.24□□□□□ -0.61
CD9-210ENST00000543916 HELTA6NFD8 242 aa11.24□□□□□ -0.61
CD9-210ENST00000543916 ZNF98A6NK75 572 aa11.24□□□□□ -0.61
CD9-210ENST00000543916 K7EQG2 157 aa11.24□□□□□ -0.61
CD9-210ENST00000543916 DNASE2O00115 360 aaPredicted RBP11.24□□□□□ -0.61
CD9-210ENST00000543916 MPDU1O75352 247 aa11.24□□□□□ -0.61
CD9-210ENST00000543916 OR5G3P0C626 314 aa11.24□□□□□ -0.61
CD9-210ENST00000543916 FRMD6-AS1P0C7T7 363 aa11.24□□□□□ -0.61
CD9-210ENST00000543916 RPL29P47914 159 aaKnown RBP11.24□□□□□ -0.61
CD9-210ENST00000543916 PAFAH1B2P68402 229 aa11.24□□□□□ -0.61
CD9-210ENST00000543916 C1orf194Q5T5A4 169 aa11.24□□□□□ -0.61
CD9-210ENST00000543916 LEMD1Q68G75 181 aa11.24□□□□□ -0.61
CD9-210ENST00000543916 SIGLEC15Q6ZMC9 328 aa11.24□□□□□ -0.61
CD9-210ENST00000543916 AQP10Q96PS8 301 aa11.24□□□□□ -0.61
CD9-210ENST00000543916 NPCDR1Q9BY65 106 aa11.24□□□□□ -0.61
CD9-210ENST00000543916 SLC25A39Q9BZJ4 359 aaPredicted RBP11.24□□□□□ -0.61
CD9-210ENST00000543916 WDR61Q9GZS3 305 aaKnown RBP11.24□□□□□ -0.61
CD9-210ENST00000543916 SLC25A32Q9H2D1 315 aa11.24□□□□□ -0.61
CD9-210ENST00000543916 SLC25A22Q9H936 323 aa11.24□□□□□ -0.61
CD9-210ENST00000543916 WFDC1Q9HC57 220 aa11.24□□□□□ -0.61
CD9-210ENST00000543916 FXYD6-FXYD2A0A087WZ82 144 aa11.23□□□□□ -0.61
CD9-210ENST00000543916 A8MZ25 164 aa11.23□□□□□ -0.61
CD9-210ENST00000543916 SMLR1H3BR10 107 aa11.23□□□□□ -0.61
CD9-210ENST00000543916 PXDC1Q5TGL8 231 aa11.23□□□□□ -0.61
CD9-210ENST00000543916 DCANP1Q8TF63 244 aa11.23□□□□□ -0.61
CD9-210ENST00000543916 CITED4Q96RK1 184 aa11.23□□□□□ -0.61
CD9-210ENST00000543916 B9D2Q9BPU9 175 aa11.23□□□□□ -0.61
CD9-210ENST00000543916 SHANK2-AS3Q9BTD1 123 aa11.23□□□□□ -0.61
CD9-210ENST00000543916 ARV1Q9H2C2 271 aa11.23□□□□□ -0.61
CD9-210ENST00000543916 SRD5A3Q9H8P0 318 aa11.23□□□□□ -0.61
CD9-210ENST00000543916 SLC39A9Q9NUM3 307 aa11.23□□□□□ -0.61
CD9-210ENST00000543916 FBXL17Q9UF56 701 aa11.23□□□□□ -0.61
CD9-210ENST00000543916 PXMP4Q9Y6I8 212 aa11.23□□□□□ -0.61
CD9-210ENST00000543916 COL7A1Q02388 2944 aa11.22□□□□□ -0.61
CD9-210ENST00000543916 COX7A2P2O60397 106 aa11.22□□□□□ -0.61
CD9-210ENST00000543916 AP2S1P53680 142 aaPredicted RBP11.22□□□□□ -0.61
CD9-210ENST00000543916 B2MP61769 119 aa11.22□□□□□ -0.61
CD9-210ENST00000543916 OR8I2Q8N0Y5 310 aa11.22□□□□□ -0.61
CD9-210ENST00000543916 TMEM37Q8WXS4 190 aa11.22□□□□□ -0.61
CD9-210ENST00000543916 FAM110AQ9BQ89 295 aa11.22□□□□□ -0.61
CD9-210ENST00000543916 TUBA4BQ9H853 241 aa11.22□□□□□ -0.61
CD9-210ENST00000543916 MAP6D1Q9H9H5 199 aa11.22□□□□□ -0.61
CD9-210ENST00000543916 NRN1Q9NPD7 142 aa11.22□□□□□ -0.61
CD9-210ENST00000543916 TNFSF18Q9UNG2 199 aa11.22□□□□□ -0.61
CD9-210ENST00000543916 RNF222A6NCQ9 220 aa11.21□□□□□ -0.61
CD9-210ENST00000543916 ZNF124Q15973 351 aa11.21□□□□□ -0.61
CD9-210ENST00000543916 MORN5Q5VZ52 161 aa11.21□□□□□ -0.61
CD9-210ENST00000543916 APRG1Q8IVJ8 170 aa11.21□□□□□ -0.61
CD9-210ENST00000543916 C17orf77Q96MU5 243 aa11.21□□□□□ -0.61
CD9-210ENST00000543916 RSG1Q9BU20 258 aa11.21□□□□□ -0.61
CD9-210ENST00000543916 ELOA3CA0A087WX78 387 aaPredicted RBP11.2□□□□□ -0.62
CD9-210ENST00000543916 RBMY1BA6NDE4 496 aaKnown RBP11.2□□□□□ -0.62
CD9-210ENST00000543916 RBMY1EA6NEQ0 496 aaKnown RBP11.2□□□□□ -0.62
CD9-210ENST00000543916 IFNA5P01569 189 aa11.2□□□□□ -0.62
CD9-210ENST00000543916 RBMY1DP0C7P1 496 aaKnown RBP11.2□□□□□ -0.62
CD9-210ENST00000543916 ZNF688P0C7X2 276 aa11.2□□□□□ -0.62
CD9-210ENST00000543916 S100A7P31151 101 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms