RNA–Protein interactions for RNA: ENST00000542602.1

PSMD9-208, Transcript of proteasome 26S subunit, non-ATPase 9, human

TSL 3 BASIC

Gene PSMD9, Length 516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD9-208	ENST00000542602	GGACT	Q9BVM4	153 aa		13.98	□□□□□ -0.17
PSMD9-208	ENST00000542602	KMT2C	Q8NEZ4	4911 aa	Known RBP	13.98	□□□□□ -0.17
PSMD9-208	ENST00000542602	CCS	O14618	274 aa		13.97	□□□□□ -0.17
PSMD9-208	ENST00000542602	PVALB	P20472	110 aa	Predicted RBP	13.97	□□□□□ -0.17
PSMD9-208	ENST00000542602	S100A7A	Q86SG5	101 aa		13.97	□□□□□ -0.17
PSMD9-208	ENST00000542602	OR8I2	Q8N0Y5	310 aa		13.97	□□□□□ -0.17
PSMD9-208	ENST00000542602	MGAT4C	Q9UBM8	478 aa		13.97	□□□□□ -0.17
PSMD9-208	ENST00000542602	RCL1	Q9Y2P8	373 aa	Known RBP	13.97	□□□□□ -0.17
PSMD9-208	ENST00000542602	DEDD	O75618	318 aa		13.96	□□□□□ -0.17
PSMD9-208	ENST00000542602	ID1	P41134	155 aa		13.96	□□□□□ -0.17
PSMD9-208	ENST00000542602	DEFA1	P59665	94 aa		13.96	□□□□□ -0.17
PSMD9-208	ENST00000542602	DEFA3	P59666	94 aa		13.96	□□□□□ -0.17
PSMD9-208	ENST00000542602	IFITM3	Q01628	133 aa		13.96	□□□□□ -0.17
PSMD9-208	ENST00000542602	TMEM41B	Q5BJD5	291 aa		13.96	□□□□□ -0.17
PSMD9-208	ENST00000542602	SAMD13	Q5VXD3	122 aa		13.96	□□□□□ -0.17
PSMD9-208	ENST00000542602	CYP2G1P	Q6ZSU1	146 aa		13.96	□□□□□ -0.17
PSMD9-208	ENST00000542602	PRAF2	O60831	178 aa		13.95	□□□□□ -0.18
PSMD9-208	ENST00000542602	ORM2	P19652	201 aa		13.95	□□□□□ -0.18
PSMD9-208	ENST00000542602	PSMG4	Q5JS54	123 aa		13.95	□□□□□ -0.18
PSMD9-208	ENST00000542602	MORN3	Q6PF18	240 aa	Predicted RBP	13.95	□□□□□ -0.18
PSMD9-208	ENST00000542602	TMEM147	Q9BVK8	224 aa		13.95	□□□□□ -0.18
PSMD9-208	ENST00000542602		K7EPK0	472 aa		13.94	□□□□□ -0.18
PSMD9-208	ENST00000542602	SPP1	P10451	314 aa		13.94	□□□□□ -0.18
PSMD9-208	ENST00000542602	BCAP31	P51572	246 aa		13.94	□□□□□ -0.18
PSMD9-208	ENST00000542602	RRAS2	P62070	204 aa	Predicted RBP	13.94	□□□□□ -0.18
PSMD9-208	ENST00000542602	ZFAND6	Q6FIF0	208 aa		13.94	□□□□□ -0.18
PSMD9-208	ENST00000542602	TEPP	Q6URK8	271 aa		13.94	□□□□□ -0.18
PSMD9-208	ENST00000542602	TRPT1	Q86TN4	253 aa	Known RBP	13.94	□□□□□ -0.18
PSMD9-208	ENST00000542602	TMEM217	Q8N7C4	229 aa		13.94	□□□□□ -0.18
PSMD9-208	ENST00000542602	GPR82	Q96P67	336 aa		13.94	□□□□□ -0.18
PSMD9-208	ENST00000542602	LSM5	Q9Y4Y9	91 aa	Known RBP	13.94	□□□□□ -0.18
PSMD9-208	ENST00000542602	ZNF98	A6NK75	572 aa		13.93	□□□□□ -0.18
PSMD9-208	ENST00000542602	INMT-MINDY4	F8WBC2	141 aa		13.93	□□□□□ -0.18
PSMD9-208	ENST00000542602	CA1	P00915	261 aa	Predicted RBP	13.93	□□□□□ -0.18
PSMD9-208	ENST00000542602	ATF4	P18848	351 aa	Predicted RBP	13.93	□□□□□ -0.18
PSMD9-208	ENST00000542602	GATA2	P23769	480 aa	Predicted RBP	13.93	□□□□□ -0.18
PSMD9-208	ENST00000542602	GALR1	P47211	349 aa		13.93	□□□□□ -0.18
PSMD9-208	ENST00000542602	PLP1	P60201	277 aa		13.93	□□□□□ -0.18
PSMD9-208	ENST00000542602	IL15RA	Q13261	267 aa		13.93	□□□□□ -0.18
PSMD9-208	ENST00000542602	ACTL10	Q5JWF8	245 aa		13.93	□□□□□ -0.18
PSMD9-208	ENST00000542602	TMEM182	Q6ZP80	229 aa	Predicted RBP	13.93	□□□□□ -0.18
PSMD9-208	ENST00000542602	NRARP	Q7Z6K4	114 aa		13.93	□□□□□ -0.18
PSMD9-208	ENST00000542602	OR1B1	Q8NGR6	318 aa		13.93	□□□□□ -0.18
PSMD9-208	ENST00000542602	RNF24	Q9Y225	148 aa		13.93	□□□□□ -0.18
PSMD9-208	ENST00000542602	KNCN	A6PVL3	124 aa		13.92	□□□□□ -0.18
PSMD9-208	ENST00000542602	HYPM	O75409	117 aa		13.92	□□□□□ -0.18
PSMD9-208	ENST00000542602	CCNK	O75909	580 aa		13.92	□□□□□ -0.18
PSMD9-208	ENST00000542602	MEOX2	P50222	304 aa		13.92	□□□□□ -0.18
PSMD9-208	ENST00000542602	CAV2	P51636	162 aa		13.92	□□□□□ -0.18
PSMD9-208	ENST00000542602	RAP2B	P61225	183 aa		13.92	□□□□□ -0.18
PSMD9-208	ENST00000542602	NUTF2	P61970	127 aa	Known RBP	13.92	□□□□□ -0.18
PSMD9-208	ENST00000542602	PXDC1	Q5TGL8	231 aa		13.92	□□□□□ -0.18
PSMD9-208	ENST00000542602	RARRES2	Q99969	163 aa		13.92	□□□□□ -0.18
PSMD9-208	ENST00000542602	MARVELD1	Q9BSK0	173 aa		13.92	□□□□□ -0.18
PSMD9-208	ENST00000542602	PSMB3	P49720	205 aa		13.91	□□□□□ -0.18
PSMD9-208	ENST00000542602	ARL16	Q0P5N6	197 aa		13.91	□□□□□ -0.18
PSMD9-208	ENST00000542602	RAB31	Q13636	194 aa		13.91	□□□□□ -0.18
PSMD9-208	ENST00000542602		A0A0J9YWU9	116 aa		13.9	□□□□□ -0.18
PSMD9-208	ENST00000542602	ISLR	O14498	428 aa		13.9	□□□□□ -0.18
PSMD9-208	ENST00000542602	GOSR2	O14653	212 aa		13.9	□□□□□ -0.18
PSMD9-208	ENST00000542602	RLN2	P04090	185 aa		13.9	□□□□□ -0.18
PSMD9-208	ENST00000542602	CYCS	P99999	105 aa	Known RBP	13.9	□□□□□ -0.18
PSMD9-208	ENST00000542602	OR11H2	Q8NH07	326 aa		13.9	□□□□□ -0.18
PSMD9-208	ENST00000542602	LINC00052	Q96N35	136 aa		13.9	□□□□□ -0.18
PSMD9-208	ENST00000542602	C11orf1	Q9H5F2	150 aa		13.9	□□□□□ -0.18
PSMD9-208	ENST00000542602	SLC25A22	Q9H936	323 aa		13.9	□□□□□ -0.18
PSMD9-208	ENST00000542602	HIGD1A	Q9Y241	93 aa		13.9	□□□□□ -0.18
PSMD9-208	ENST00000542602	FAM24A	A6NFZ4	105 aa		13.89	□□□□□ -0.19
PSMD9-208	ENST00000542602	LINC00869	P0C866	280 aa		13.89	□□□□□ -0.19
PSMD9-208	ENST00000542602	S100A11	P31949	105 aa		13.89	□□□□□ -0.19
PSMD9-208	ENST00000542602	S100A10	P60903	97 aa		13.89	□□□□□ -0.19
PSMD9-208	ENST00000542602	RAB32	Q13637	225 aa		13.89	□□□□□ -0.19
PSMD9-208	ENST00000542602	SPATA31B1P	Q5VZV4	182 aa		13.89	□□□□□ -0.19
PSMD9-208	ENST00000542602	ZNF546	Q86UE3	836 aa		13.89	□□□□□ -0.19
PSMD9-208	ENST00000542602	RSG1	Q9BU20	258 aa		13.89	□□□□□ -0.19
PSMD9-208	ENST00000542602	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	13.89	□□□□□ -0.19
PSMD9-208	ENST00000542602	LYRM2	Q9NU23	88 aa	Predicted RBP	13.89	□□□□□ -0.19
PSMD9-208	ENST00000542602		H3BMM0	161 aa		13.88	□□□□□ -0.19
PSMD9-208	ENST00000542602	OR5G3	P0C626	314 aa		13.88	□□□□□ -0.19
PSMD9-208	ENST00000542602	RPL7	P18124	248 aa	Known RBP	13.88	□□□□□ -0.19
PSMD9-208	ENST00000542602	SULT1A1	P50225	295 aa		13.88	□□□□□ -0.19
PSMD9-208	ENST00000542602	HBG1	P69891	147 aa		13.88	□□□□□ -0.19
PSMD9-208	ENST00000542602	HBG2	P69892	147 aa		13.88	□□□□□ -0.19
PSMD9-208	ENST00000542602	SLC38A11	Q08AI6	406 aa		13.88	□□□□□ -0.19
PSMD9-208	ENST00000542602	ATP6V1F	Q16864	119 aa		13.88	□□□□□ -0.19
PSMD9-208	ENST00000542602	STX12	Q86Y82	276 aa		13.88	□□□□□ -0.19
PSMD9-208	ENST00000542602	SHANK2-AS3	Q9BTD1	123 aa		13.88	□□□□□ -0.19
PSMD9-208	ENST00000542602	C1QTNF4	Q9BXJ3	329 aa		13.88	□□□□□ -0.19
PSMD9-208	ENST00000542602	SLC25A32	Q9H2D1	315 aa		13.88	□□□□□ -0.19
PSMD9-208	ENST00000542602	SOCS3	O14543	225 aa		13.87	□□□□□ -0.19
PSMD9-208	ENST00000542602	AGPAT2	O15120	278 aa		13.87	□□□□□ -0.19
PSMD9-208	ENST00000542602	CST7	O76096	145 aa		13.87	□□□□□ -0.19
PSMD9-208	ENST00000542602	GIG44	P09565	113 aa	Predicted RBP	13.87	□□□□□ -0.19
PSMD9-208	ENST00000542602	HLA-DRB4	P13762	266 aa		13.87	□□□□□ -0.19
PSMD9-208	ENST00000542602	FOXI2	Q6ZQN5	318 aa		13.87	□□□□□ -0.19
PSMD9-208	ENST00000542602	TMEM252	Q8N6L7	170 aa		13.87	□□□□□ -0.19
PSMD9-208	ENST00000542602	C16orf92	Q96LL3	132 aa		13.87	□□□□□ -0.19
PSMD9-208	ENST00000542602	NMES1	Q9C002	83 aa		13.87	□□□□□ -0.19
PSMD9-208	ENST00000542602	ARL6	Q9H0F7	186 aa		13.87	□□□□□ -0.19
PSMD9-208	ENST00000542602	UQCC1	Q9NVA1	299 aa		13.87	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 145.1 ms