RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 ARL14EPLP0DKL9 152 aa6.48□□□□□ -1.37
PDLIM5-221ENST00000542407 PPIFP30405 207 aaKnown RBP6.48□□□□□ -1.37
PDLIM5-221ENST00000542407 PTPRZ1P23471 2315 aaPredicted RBP6.48□□□□□ -1.37
PDLIM5-221ENST00000542407 ZNF785A8K8V0 405 aa6.48□□□□□ -1.37
PDLIM5-221ENST00000542407 CLDN14O95500 239 aa6.48□□□□□ -1.37
PDLIM5-221ENST00000542407 MT-ATP8P03928 68 aa6.48□□□□□ -1.37
PDLIM5-221ENST00000542407 TFF1P04155 84 aa6.48□□□□□ -1.37
PDLIM5-221ENST00000542407 CT45A6P0DMU7 189 aa6.48□□□□□ -1.37
PDLIM5-221ENST00000542407 CT45A5P0DMU8 189 aa6.48□□□□□ -1.37
PDLIM5-221ENST00000542407 CT45A7P0DMV0 189 aa6.48□□□□□ -1.37
PDLIM5-221ENST00000542407 CT45A1Q5HYN5 189 aa6.48□□□□□ -1.37
PDLIM5-221ENST00000542407 CT45A3Q8NHU0 189 aa6.48□□□□□ -1.37
PDLIM5-221ENST00000542407 SPAG8Q99932 426 aaPredicted RBP6.48□□□□□ -1.37
PDLIM5-221ENST00000542407 GNB1LQ9BYB4 327 aa6.48□□□□□ -1.37
PDLIM5-221ENST00000542407 RNASE7Q9H1E1 156 aaKnown RBP6.48□□□□□ -1.37
PDLIM5-221ENST00000542407 ST20Q9HBF5 79 aa6.48□□□□□ -1.37
PDLIM5-221ENST00000542407 OR2W1Q9Y3N9 320 aa6.48□□□□□ -1.37
PDLIM5-221ENST00000542407 INSIG2Q9Y5U4 225 aa6.48□□□□□ -1.37
PDLIM5-221ENST00000542407 LOC107984640A0A0U1RRK4 108 aa6.48□□□□□ -1.37
PDLIM5-221ENST00000542407 hDV102S1A0JD36 115 aa6.48□□□□□ -1.37
PDLIM5-221ENST00000542407 FCN3O75636 299 aa6.48□□□□□ -1.37
PDLIM5-221ENST00000542407 IGLV2-14P01704 120 aa6.48□□□□□ -1.37
PDLIM5-221ENST00000542407 COL8A2P25067 703 aa6.48□□□□□ -1.37
PDLIM5-221ENST00000542407 CD40P25942 277 aa6.48□□□□□ -1.37
PDLIM5-221ENST00000542407 RPL31P62899 125 aaKnown RBP6.48□□□□□ -1.37
PDLIM5-221ENST00000542407 OR10J3Q5JRS4 329 aa6.48□□□□□ -1.37
PDLIM5-221ENST00000542407 EBLN2Q6P2I7 272 aa6.48□□□□□ -1.37
PDLIM5-221ENST00000542407 BAALCQ8WXS3 180 aa6.48□□□□□ -1.37
PDLIM5-221ENST00000542407 TIMM8BQ9Y5J9 83 aaPredicted RBP6.48□□□□□ -1.37
PDLIM5-221ENST00000542407 TINCRA0A1B0GVN0 87 aa6.47□□□□□ -1.37
PDLIM5-221ENST00000542407 FAM181BA6NEQ2 426 aa6.47□□□□□ -1.37
PDLIM5-221ENST00000542407 C9orf118A6NHY6 69 aa6.47□□□□□ -1.37
PDLIM5-221ENST00000542407 BMPR1BO00238 502 aa6.47□□□□□ -1.37
PDLIM5-221ENST00000542407 NBR2O15453 112 aa6.47□□□□□ -1.37
PDLIM5-221ENST00000542407 CA1P00915 261 aaPredicted RBP6.47□□□□□ -1.37
PDLIM5-221ENST00000542407 APCSP02743 223 aa6.47□□□□□ -1.37
PDLIM5-221ENST00000542407 UBE2G1P62253 170 aa6.47□□□□□ -1.37
PDLIM5-221ENST00000542407 ASPHD1Q5U4P2 390 aa6.47□□□□□ -1.37
PDLIM5-221ENST00000542407 ZFAND6Q6FIF0 208 aa6.47□□□□□ -1.37
PDLIM5-221ENST00000542407 TMEM14EPQ6UXP3 125 aa6.47□□□□□ -1.37
PDLIM5-221ENST00000542407 FGFRL1Q8N441 504 aa6.47□□□□□ -1.37
PDLIM5-221ENST00000542407 NUP37Q8NFH4 326 aa6.47□□□□□ -1.37
PDLIM5-221ENST00000542407 Q8TCH9 128 aa6.47□□□□□ -1.37
PDLIM5-221ENST00000542407 COQ2Q96H96 371 aa6.47□□□□□ -1.37
PDLIM5-221ENST00000542407 SPTBN2O15020 2390 aa6.47□□□□□ -1.37
PDLIM5-221ENST00000542407 A0A087X0K7 114 aa6.47□□□□□ -1.37
PDLIM5-221ENST00000542407 hADV38S2A0JD32 116 aa6.47□□□□□ -1.37
PDLIM5-221ENST00000542407 C16orf97H3BN30 126 aa6.47□□□□□ -1.37
PDLIM5-221ENST00000542407 ZG16O60844 167 aa6.47□□□□□ -1.37
PDLIM5-221ENST00000542407 G6PCP35575 357 aa6.47□□□□□ -1.37
PDLIM5-221ENST00000542407 ZNF816Q0VGE8 651 aaPredicted RBP6.47□□□□□ -1.37
PDLIM5-221ENST00000542407 TMEM136Q6ZRR5 245 aa6.47□□□□□ -1.37
PDLIM5-221ENST00000542407 KIR3DL3Q8N743 410 aa6.47□□□□□ -1.37
PDLIM5-221ENST00000542407 LSM10Q969L4 123 aaKnown RBP6.47□□□□□ -1.37
PDLIM5-221ENST00000542407 OR2D2Q9H210 308 aa6.47□□□□□ -1.37
PDLIM5-221ENST00000542407 SVILO95425 2214 aa6.46□□□□□ -1.37
PDLIM5-221ENST00000542407 SRRM5B3KS81 715 aa6.46□□□□□ -1.37
PDLIM5-221ENST00000542407 MOSP00540 346 aa6.46□□□□□ -1.37
PDLIM5-221ENST00000542407 LHBP01229 141 aa6.46□□□□□ -1.37
PDLIM5-221ENST00000542407 CD3EP07766 207 aa6.46□□□□□ -1.37
PDLIM5-221ENST00000542407 ADAMTSL5Q6ZMM2 481 aa6.46□□□□□ -1.37
PDLIM5-221ENST00000542407 CD177Q8N6Q3 437 aa6.46□□□□□ -1.37
PDLIM5-221ENST00000542407 OR2T6Q8NHC8 308 aa6.46□□□□□ -1.37
PDLIM5-221ENST00000542407 LRRC29Q8WV35 223 aa6.46□□□□□ -1.37
PDLIM5-221ENST00000542407 SGK494Q96LW2 274 aa6.46□□□□□ -1.37
PDLIM5-221ENST00000542407 OR8B2Q96RD0 313 aa6.46□□□□□ -1.37
PDLIM5-221ENST00000542407 SPANXB1Q9NS25 103 aaPredicted RBP6.46□□□□□ -1.37
PDLIM5-221ENST00000542407 DUSP13Q9UII6 198 aa6.46□□□□□ -1.37
PDLIM5-221ENST00000542407 PTPRQQ9UMZ3 2332 aa6.46□□□□□ -1.38
PDLIM5-221ENST00000542407 SMG1Q96Q15 3661 aaKnown RBP6.46□□□□□ -1.38
PDLIM5-221ENST00000542407 TRBV9A0A0B4J1U6 114 aa6.46□□□□□ -1.38
PDLIM5-221ENST00000542407 A0A1W2PPI3 338 aa6.46□□□□□ -1.38
PDLIM5-221ENST00000542407 OR4C46A6NHA9 309 aa6.46□□□□□ -1.38
PDLIM5-221ENST00000542407 H0YJW9 148 aa6.46□□□□□ -1.38
PDLIM5-221ENST00000542407 APOA2P02652 100 aa6.46□□□□□ -1.38
PDLIM5-221ENST00000542407 FCGR2BP31994 310 aaPredicted RBP6.46□□□□□ -1.38
PDLIM5-221ENST00000542407 SLC35E4Q6ICL7 350 aa6.46□□□□□ -1.38
PDLIM5-221ENST00000542407 GCSAMQ8N6F7 178 aa6.46□□□□□ -1.38
PDLIM5-221ENST00000542407 TEX29Q8N6K0 151 aa6.46□□□□□ -1.38
PDLIM5-221ENST00000542407 OR10AG1Q8NH19 301 aa6.46□□□□□ -1.38
PDLIM5-221ENST00000542407 GGTLC1Q9BX51 225 aa6.46□□□□□ -1.38
PDLIM5-221ENST00000542407 YTHDF2Q9Y5A9 579 aaKnown RBP6.46□□□□□ -1.38
PDLIM5-221ENST00000542407 IGKV1D-17A0A075B6S4 117 aa6.45□□□□□ -1.38
PDLIM5-221ENST00000542407 TRAV9-1A0A075B6T8 112 aa6.45□□□□□ -1.38
PDLIM5-221ENST00000542407 SAA2-SAA4A0A096LPE2 208 aa6.45□□□□□ -1.38
PDLIM5-221ENST00000542407 MT-ND6P03923 174 aa6.45□□□□□ -1.38
PDLIM5-221ENST00000542407 LINC00869P0C866 280 aa6.45□□□□□ -1.38
PDLIM5-221ENST00000542407 LINC00694P0DN24 101 aa6.45□□□□□ -1.38
PDLIM5-221ENST00000542407 PRDX2P32119 198 aa6.45□□□□□ -1.38
PDLIM5-221ENST00000542407 MEIG1Q5JSS6 88 aa6.45□□□□□ -1.38
PDLIM5-221ENST00000542407 SLC25A34Q6PIV7 304 aa6.45□□□□□ -1.38
PDLIM5-221ENST00000542407 Q6ZUT4 128 aa6.45□□□□□ -1.38
PDLIM5-221ENST00000542407 SPATA12Q7Z6I5 190 aa6.45□□□□□ -1.38
PDLIM5-221ENST00000542407 STPG3Q8N7X2 389 aa6.45□□□□□ -1.38
PDLIM5-221ENST00000542407 OR1L8Q8NGR8 309 aa6.45□□□□□ -1.38
PDLIM5-221ENST00000542407 TMEM101Q96IK0 257 aa6.45□□□□□ -1.38
PDLIM5-221ENST00000542407 VKORC1Q9BQB6 163 aa6.45□□□□□ -1.38
PDLIM5-221ENST00000542407 MAP1LC3AQ9H492 121 aa6.45□□□□□ -1.38
PDLIM5-221ENST00000542407 SPCS1Q9Y6A9 102 aa6.45□□□□□ -1.38
PDLIM5-221ENST00000542407 LINC00312Q9Y6C7 94 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms