RNA–Protein interactions for RNA: ENST00000542238.5

RTN3-211, Transcript of reticulon 3, humanhuman

TSL 3

Gene RTN3, Length 735 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-211ENST00000542238 C1orf134Q5TEV5 83 aa10.99□□□□□ -0.65
RTN3-211ENST00000542238 GDF5OSQ5U4N7 250 aa10.99□□□□□ -0.65
RTN3-211ENST00000542238 FOXI2Q6ZQN5 318 aa10.99□□□□□ -0.65
RTN3-211ENST00000542238 OR4B1Q8NGF8 309 aa10.99□□□□□ -0.65
RTN3-211ENST00000542238 OR51G1Q8NGK1 321 aa10.99□□□□□ -0.65
RTN3-211ENST00000542238 COQ8AQ8NI60 647 aa10.99□□□□□ -0.65
RTN3-211ENST00000542238 SAV1Q9H4B6 383 aaPredicted RBP10.99□□□□□ -0.65
RTN3-211ENST00000542238 GOLT1BQ9Y3E0 138 aa10.99□□□□□ -0.65
RTN3-211ENST00000542238 NACAE9PAV3 2078 aa10.98□□□□□ -0.65
RTN3-211ENST00000542238 RAB3DO95716 219 aa10.98□□□□□ -0.65
RTN3-211ENST00000542238 TAS2R19P59542 299 aa10.98□□□□□ -0.65
RTN3-211ENST00000542238 ZFP69Q49AA0 526 aa10.98□□□□□ -0.65
RTN3-211ENST00000542238 SPATA31B1PQ5VZV4 182 aa10.98□□□□□ -0.65
RTN3-211ENST00000542238 ZNF575Q86XF7 245 aa10.98□□□□□ -0.65
RTN3-211ENST00000542238 SELENOHQ8IZQ5 122 aaKnown RBP10.98□□□□□ -0.65
RTN3-211ENST00000542238 TMEM229BQ8NBD8 167 aa10.98□□□□□ -0.65
RTN3-211ENST00000542238 OR4D10Q8NGI6 311 aa10.98□□□□□ -0.65
RTN3-211ENST00000542238 GLYATL2Q8WU03 294 aa10.98□□□□□ -0.65
RTN3-211ENST00000542238 GPR146Q96CH1 333 aa10.98□□□□□ -0.65
RTN3-211ENST00000542238 RNF125Q96EQ8 232 aa10.98□□□□□ -0.65
RTN3-211ENST00000542238 CLUHP3Q96NS8 147 aa10.98□□□□□ -0.65
RTN3-211ENST00000542238 C7orf50Q9BRJ6 194 aaKnown RBP10.98□□□□□ -0.65
RTN3-211ENST00000542238 PBDC1Q9BVG4 233 aa10.98□□□□□ -0.65
RTN3-211ENST00000542238 PKD1P98161 4303 aa10.98□□□□□ -0.65
RTN3-211ENST00000542238 NXPH3O95157 252 aa10.97□□□□□ -0.65
RTN3-211ENST00000542238 HBE1P02100 147 aa10.97□□□□□ -0.65
RTN3-211ENST00000542238 PSMB3P49720 205 aa10.97□□□□□ -0.65
RTN3-211ENST00000542238 NKX2-5P52952 324 aaPredicted RBP10.97□□□□□ -0.65
RTN3-211ENST00000542238 TMEM268Q5VZI3 342 aa10.97□□□□□ -0.65
RTN3-211ENST00000542238 OR8G2PQ6IF36 304 aa10.97□□□□□ -0.65
RTN3-211ENST00000542238 STEAP1BQ6NZ63 245 aa10.97□□□□□ -0.65
RTN3-211ENST00000542238 EBLN2Q6P2I7 272 aa10.97□□□□□ -0.65
RTN3-211ENST00000542238 LHFPL5Q8TAF8 219 aa10.97□□□□□ -0.65
RTN3-211ENST00000542238 TMEM170AQ8WVE7 144 aa10.97□□□□□ -0.65
RTN3-211ENST00000542238 NAA60Q9H7X0 242 aa10.97□□□□□ -0.65
RTN3-211ENST00000542238 LOC102723971A0A1B0GUV8 181 aa10.96□□□□□ -0.65
RTN3-211ENST00000542238 CENPXA8MT69 81 aa10.96□□□□□ -0.65
RTN3-211ENST00000542238 DEFB1P60022 68 aa10.96□□□□□ -0.65
RTN3-211ENST00000542238 PSG9Q00887 426 aa10.96□□□□□ -0.65
RTN3-211ENST00000542238 KLF9Q13886 244 aaPredicted RBP10.96□□□□□ -0.65
RTN3-211ENST00000542238 MEF2DQ14814 521 aa10.96□□□□□ -0.65
RTN3-211ENST00000542238 NMSQ5H8A3 153 aa10.96□□□□□ -0.65
RTN3-211ENST00000542238 ZNF709Q8N972 641 aa10.96□□□□□ -0.65
RTN3-211ENST00000542238 RTBDNQ9BSG5 229 aaPredicted RBP10.96□□□□□ -0.65
RTN3-211ENST00000542238 PLA2G2EQ9NZK7 142 aa10.96□□□□□ -0.65
RTN3-211ENST00000542238 TMED3Q9Y3Q3 217 aa10.96□□□□□ -0.65
RTN3-211ENST00000542238 YTHDF2Q9Y5A9 579 aaKnown RBP10.96□□□□□ -0.65
RTN3-211ENST00000542238 U3KQ87 197 aa10.96□□□□□ -0.65
RTN3-211ENST00000542238 ABCA13Q86UQ4 5058 aa10.95□□□□□ -0.66
RTN3-211ENST00000542238 ZFP92A6NM28 416 aa10.95□□□□□ -0.66
RTN3-211ENST00000542238 FABP1P07148 127 aa10.95□□□□□ -0.66
RTN3-211ENST00000542238 SULT1A3P0DMM9 295 aa10.95□□□□□ -0.66
RTN3-211ENST00000542238 SULT1A4P0DMN0 295 aa10.95□□□□□ -0.66
RTN3-211ENST00000542238 FAM3BP58499 235 aaPredicted RBP10.95□□□□□ -0.66
RTN3-211ENST00000542238 DAD1P61803 113 aa10.95□□□□□ -0.66
RTN3-211ENST00000542238 SURF2Q15527 256 aaPredicted RBP10.95□□□□□ -0.66
RTN3-211ENST00000542238 RRN3P1Q2M238 152 aa10.95□□□□□ -0.66
RTN3-211ENST00000542238 PYDC2Q56P42 97 aa10.95□□□□□ -0.66
RTN3-211ENST00000542238 C1orf194Q5T5A4 169 aa10.95□□□□□ -0.66
RTN3-211ENST00000542238 MZT2BQ6NZ67 158 aa10.95□□□□□ -0.66
RTN3-211ENST00000542238 TMEM88Q6PEY1 159 aa10.95□□□□□ -0.66
RTN3-211ENST00000542238 TCTE3Q8IZS6 198 aa10.95□□□□□ -0.66
RTN3-211ENST00000542238 SLC7A5P1Q8MH63 180 aa10.95□□□□□ -0.66
RTN3-211ENST00000542238 TRIM63Q969Q1 353 aa10.95□□□□□ -0.66
RTN3-211ENST00000542238 SLC35B3Q9H1N7 401 aa10.95□□□□□ -0.66
RTN3-211ENST00000542238 ANKRD20A5PA0PJZ0 165 aa10.94□□□□□ -0.66
RTN3-211ENST00000542238 DISC1C4P0D8 188 aa10.94□□□□□ -0.66
RTN3-211ENST00000542238 PLA2G10O15496 165 aa10.94□□□□□ -0.66
RTN3-211ENST00000542238 AP3S2P59780 193 aa10.94□□□□□ -0.66
RTN3-211ENST00000542238 SUPT4H1P63272 117 aaKnown RBP10.94□□□□□ -0.66
RTN3-211ENST00000542238 FAM78BQ5VT40 261 aa10.94□□□□□ -0.66
RTN3-211ENST00000542238 SAMD13Q5VXD3 122 aa10.94□□□□□ -0.66
RTN3-211ENST00000542238 TRIQKQ629K1 86 aa10.94□□□□□ -0.66
RTN3-211ENST00000542238 GSG1LQ6UXU4 331 aa10.94□□□□□ -0.66
RTN3-211ENST00000542238 LGI3Q8N145 548 aa10.94□□□□□ -0.66
RTN3-211ENST00000542238 C15orf53Q8NAA6 179 aa10.94□□□□□ -0.66
RTN3-211ENST00000542238 ENKURQ8TC29 256 aa10.94□□□□□ -0.66
RTN3-211ENST00000542238 TMEM208Q9BTX3 173 aa10.94□□□□□ -0.66
RTN3-211ENST00000542238 KRTAP4-5Q9BYR2 181 aa10.94□□□□□ -0.66
RTN3-211ENST00000542238 MAGT1Q9H0U3 335 aa10.94□□□□□ -0.66
RTN3-211ENST00000542238 CRYM-AS1A6NIL9 109 aa10.93□□□□□ -0.66
RTN3-211ENST00000542238 ISLRO14498 428 aa10.93□□□□□ -0.66
RTN3-211ENST00000542238 PAX9P55771 341 aa10.93□□□□□ -0.66
RTN3-211ENST00000542238 LYZP61626 148 aa10.93□□□□□ -0.66
RTN3-211ENST00000542238 OR8I2Q8N0Y5 310 aa10.93□□□□□ -0.66
RTN3-211ENST00000542238 C1orf158Q8N1D5 194 aa10.93□□□□□ -0.66
RTN3-211ENST00000542238 DTD1Q8TEA8 209 aa10.93□□□□□ -0.66
RTN3-211ENST00000542238 SLC35E1Q96K37 410 aa10.93□□□□□ -0.66
RTN3-211ENST00000542238 ATG101Q9BSB4 218 aa10.93□□□□□ -0.66
RTN3-211ENST00000542238 RPRMQ9NS64 109 aa10.93□□□□□ -0.66
RTN3-211ENST00000542238 KCNIP3Q9Y2W7 256 aa10.93□□□□□ -0.66
RTN3-211ENST00000542238 TMEM56-RWDD3S4R434 201 aa10.93□□□□□ -0.66
RTN3-211ENST00000542238 DNAH11Q96DT5 4516 aa10.93□□□□□ -0.66
RTN3-211ENST00000542238 A0A0J9YX75 114 aa10.92□□□□□ -0.66
RTN3-211ENST00000542238 SNRPGP15A8MWD9 76 aa10.92□□□□□ -0.66
RTN3-211ENST00000542238 SOCS3O14543 225 aa10.92□□□□□ -0.66
RTN3-211ENST00000542238 GPX4P36969 197 aaPredicted RBP10.92□□□□□ -0.66
RTN3-211ENST00000542238 ATP5IP56385 69 aaPredicted RBP10.92□□□□□ -0.66
RTN3-211ENST00000542238 ZNF90Q03938 601 aa10.92□□□□□ -0.66
RTN3-211ENST00000542238 FAAP20Q6NZ36 180 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 222.3 ms