RNA–Protein interactions for RNA: ENST00000541713.5

PTPN1-202, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

TSL 2 BASIC

Gene PTPN1, Length 3,469 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-202ENST00000541713 SPATA45Q537H7 98 aa10.84□□□□□ -0.67
PTPN1-202ENST00000541713 FBLN7Q53RD9 439 aa10.84□□□□□ -0.67
PTPN1-202ENST00000541713 C1orf174Q8IYL3 243 aa10.84□□□□□ -0.67
PTPN1-202ENST00000541713 OR1L4Q8NGR5 311 aa10.84□□□□□ -0.67
PTPN1-202ENST00000541713 NOL4LQ96MY1 436 aaPredicted RBP10.84□□□□□ -0.67
PTPN1-202ENST00000541713 SNAI2O43623 268 aa10.84□□□□□ -0.67
PTPN1-202ENST00000541713 FAM169BQ8N8A8 192 aa10.84□□□□□ -0.67
PTPN1-202ENST00000541713 VSTM2AQ8TAG5 236 aa10.84□□□□□ -0.67
PTPN1-202ENST00000541713 TMEM186Q96B77 213 aa10.84□□□□□ -0.67
PTPN1-202ENST00000541713 FXYD5Q96DB9 178 aa10.84□□□□□ -0.67
PTPN1-202ENST00000541713 VPS13CQ709C8 3753 aa10.84□□□□□ -0.67
PTPN1-202ENST00000541713 VWC2LB2RUY7 222 aa10.83□□□□□ -0.67
PTPN1-202ENST00000541713 GPX1P07203 203 aa10.83□□□□□ -0.67
PTPN1-202ENST00000541713 FCGR2BP31994 310 aaPredicted RBP10.83□□□□□ -0.67
PTPN1-202ENST00000541713 TBR1Q16650 682 aa10.83□□□□□ -0.67
PTPN1-202ENST00000541713 TMEM167AQ8TBQ9 72 aa10.83□□□□□ -0.67
PTPN1-202ENST00000541713 C9JCJ5 164 aa10.83□□□□□ -0.68
PTPN1-202ENST00000541713 AMY1AP04745 511 aa10.83□□□□□ -0.68
PTPN1-202ENST00000541713 C3orf79P0CE67 100 aa10.83□□□□□ -0.68
PTPN1-202ENST00000541713 HINT1P49773 126 aaPredicted RBP10.83□□□□□ -0.68
PTPN1-202ENST00000541713 TPTE2P1Q5T6R2 138 aa10.83□□□□□ -0.68
PTPN1-202ENST00000541713 Q6ZN92 141 aa10.83□□□□□ -0.68
PTPN1-202ENST00000541713 LINC00173Q6ZV60 143 aa10.83□□□□□ -0.68
PTPN1-202ENST00000541713 PPP1R27Q86WC6 154 aa10.83□□□□□ -0.68
PTPN1-202ENST00000541713 SRSF12Q8WXF0 261 aaKnown RBP10.83□□□□□ -0.68
PTPN1-202ENST00000541713 Q9H3A6 140 aa10.83□□□□□ -0.68
PTPN1-202ENST00000541713 PIEZO1Q92508 2521 aa10.83□□□□□ -0.68
PTPN1-202ENST00000541713 FLNCQ14315 2725 aa10.83□□□□□ -0.68
PTPN1-202ENST00000541713 SERTM2A0A1B0GWG4 89 aa10.83□□□□□ -0.68
PTPN1-202ENST00000541713 IGLC7A0M8Q6 106 aa10.83□□□□□ -0.68
PTPN1-202ENST00000541713 COL8A1P27658 744 aa10.83□□□□□ -0.68
PTPN1-202ENST00000541713 LDLRAD2Q5SZI1 272 aa10.83□□□□□ -0.68
PTPN1-202ENST00000541713 TXNDC17Q9BRA2 123 aa10.83□□□□□ -0.68
PTPN1-202ENST00000541713 EPDR1Q9UM22 224 aa10.83□□□□□ -0.68
PTPN1-202ENST00000541713 PTPN13Q12923 2485 aa10.83□□□□□ -0.68
PTPN1-202ENST00000541713 USP9XQ93008 2570 aaPredicted RBP10.83□□□□□ -0.68
PTPN1-202ENST00000541713 IGHV1-3A0A0C4DH29 117 aa10.82□□□□□ -0.68
PTPN1-202ENST00000541713 A0A1W2PRE2 83 aa10.82□□□□□ -0.68
PTPN1-202ENST00000541713 C11orf52Q96A22 123 aa10.82□□□□□ -0.68
PTPN1-202ENST00000541713 LOC389332A0A1B0GUA5 103 aa10.82□□□□□ -0.68
PTPN1-202ENST00000541713 C1orf194Q5T5A4 169 aa10.82□□□□□ -0.68
PTPN1-202ENST00000541713 OR8B2Q96RD0 313 aa10.82□□□□□ -0.68
PTPN1-202ENST00000541713 RASL11BQ9BPW5 248 aa10.82□□□□□ -0.68
PTPN1-202ENST00000541713 SIGLEC9Q9Y336 463 aa10.82□□□□□ -0.68
PTPN1-202ENST00000541713 P01737 135 aa10.82□□□□□ -0.68
PTPN1-202ENST00000541713 IL4P05112 153 aa10.82□□□□□ -0.68
PTPN1-202ENST00000541713 MEF2CQ06413 473 aaPredicted RBP10.82□□□□□ -0.68
PTPN1-202ENST00000541713 TMEM183BQ1AE95 376 aa10.82□□□□□ -0.68
PTPN1-202ENST00000541713 TMEM155Q4W5P6 130 aa10.82□□□□□ -0.68
PTPN1-202ENST00000541713 TSKUQ8WUA8 353 aa10.82□□□□□ -0.68
PTPN1-202ENST00000541713 PERPQ96FX8 193 aa10.82□□□□□ -0.68
PTPN1-202ENST00000541713 A0A1B0GWJ7 208 aa10.81□□□□□ -0.68
PTPN1-202ENST00000541713 POU2AF1Q16633 256 aa10.81□□□□□ -0.68
PTPN1-202ENST00000541713 NUP37Q8NFH4 326 aa10.81□□□□□ -0.68
PTPN1-202ENST00000541713 NGBQ9NPG2 151 aa10.81□□□□□ -0.68
PTPN1-202ENST00000541713 OSTCQ9NRP0 149 aa10.81□□□□□ -0.68
PTPN1-202ENST00000541713 ARL2-SNX15V9GYD0 113 aa10.81□□□□□ -0.68
PTPN1-202ENST00000541713 TDGF1P3P51864 188 aa10.81□□□□□ -0.68
PTPN1-202ENST00000541713 C11orf42Q8N5U0 333 aa10.81□□□□□ -0.68
PTPN1-202ENST00000541713 IGF2BP2-AS1Q96M15 143 aa10.81□□□□□ -0.68
PTPN1-202ENST00000541713 RAXQ9Y2V3 346 aa10.81□□□□□ -0.68
PTPN1-202ENST00000541713 CACNG8Q8WXS5 425 aa10.81□□□□□ -0.68
PTPN1-202ENST00000541713 CLEC7AQ9BXN2 247 aa10.81□□□□□ -0.68
PTPN1-202ENST00000541713 LINC00527Q9UJ94 153 aa10.81□□□□□ -0.68
PTPN1-202ENST00000541713 APOBEC3AP31941 199 aaPredicted RBP10.8□□□□□ -0.68
PTPN1-202ENST00000541713 ZNF672Q499Z4 452 aaPredicted RBP10.8□□□□□ -0.68
PTPN1-202ENST00000541713 WFDC3Q8IUB2 231 aa10.8□□□□□ -0.68
PTPN1-202ENST00000541713 C18orf32Q8TCD1 76 aa10.8□□□□□ -0.68
PTPN1-202ENST00000541713 GNB1LQ9BYB4 327 aa10.8□□□□□ -0.68
PTPN1-202ENST00000541713 CHEK1O14757 476 aa10.8□□□□□ -0.68
PTPN1-202ENST00000541713 ZNF207O43670 478 aaKnown RBP10.8□□□□□ -0.68
PTPN1-202ENST00000541713 ZNF324O75467 553 aaPredicted RBP10.8□□□□□ -0.68
PTPN1-202ENST00000541713 PRRX1P54821 245 aa10.8□□□□□ -0.68
PTPN1-202ENST00000541713 HIGD1AQ9Y241 93 aa10.8□□□□□ -0.68
PTPN1-202ENST00000541713 IZUMO1RA6ND01 250 aa10.79□□□□□ -0.68
PTPN1-202ENST00000541713 PAFAH1B2P68402 229 aa10.79□□□□□ -0.68
PTPN1-202ENST00000541713 RBM14Q96PK6 669 aaKnown RBP10.79□□□□□ -0.68
PTPN1-202ENST00000541713 BUB1B-PAK6H3BSN5 160 aa10.79□□□□□ -0.68
PTPN1-202ENST00000541713 J3KRW8 73 aa10.79□□□□□ -0.68
PTPN1-202ENST00000541713 ITGB1BP1O14713 200 aa10.79□□□□□ -0.68
PTPN1-202ENST00000541713 SSX8Q7RTT4 187 aa10.79□□□□□ -0.68
PTPN1-202ENST00000541713 CELSR2Q9HCU4 2923 aa10.79□□□□□ -0.68
PTPN1-202ENST00000541713 SIAH2O43255 324 aa10.79□□□□□ -0.68
PTPN1-202ENST00000541713 NUTF2P61970 127 aaKnown RBP10.79□□□□□ -0.68
PTPN1-202ENST00000541713 WDR73Q6P4I2 378 aa10.79□□□□□ -0.68
PTPN1-202ENST00000541713 KCNS1Q96KK3 526 aa10.79□□□□□ -0.68
PTPN1-202ENST00000541713 MYO9AB2RTY4 2548 aa10.79□□□□□ -0.68
PTPN1-202ENST00000541713 MC5RP33032 325 aa10.78□□□□□ -0.68
PTPN1-202ENST00000541713 ABCA12Q86UK0 2595 aa10.78□□□□□ -0.68
PTPN1-202ENST00000541713 LRRK2Q5S007 2527 aa10.78□□□□□ -0.68
PTPN1-202ENST00000541713 PSMB11A5LHX3 300 aa10.78□□□□□ -0.68
PTPN1-202ENST00000541713 HLA-DQA1P01909 254 aa10.78□□□□□ -0.68
PTPN1-202ENST00000541713 TMEM249Q2WGJ8 235 aa10.78□□□□□ -0.68
PTPN1-202ENST00000541713 Q8TAT8 98 aa10.78□□□□□ -0.68
PTPN1-202ENST00000541713 SONP18583 2426 aaKnown RBP10.78□□□□□ -0.68
PTPN1-202ENST00000541713 OR2J3O76001 311 aa10.78□□□□□ -0.68
PTPN1-202ENST00000541713 NPSP0C0P6 89 aa10.78□□□□□ -0.68
PTPN1-202ENST00000541713 RBPJQ06330 500 aa10.78□□□□□ -0.68
PTPN1-202ENST00000541713 LY6DQ14210 128 aa10.78□□□□□ -0.68
PTPN1-202ENST00000541713 MRPL32Q9BYC8 188 aaKnown RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms