RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 CST7O76096 145 aa6.84□□□□□ -1.31
SNHG1-215ENST00000540904 CFDP00746 253 aaPredicted RBP6.84□□□□□ -1.31
SNHG1-215ENST00000540904 ZNF688P0C7X2 276 aa6.84□□□□□ -1.31
SNHG1-215ENST00000540904 RPL35AP18077 110 aaKnown RBP6.84□□□□□ -1.31
SNHG1-215ENST00000540904 ORM2P19652 201 aa6.84□□□□□ -1.31
SNHG1-215ENST00000540904 AP2S1P53680 142 aaPredicted RBP6.84□□□□□ -1.31
SNHG1-215ENST00000540904 DEFB131AP59861 70 aa6.84□□□□□ -1.31
SNHG1-215ENST00000540904 LRRC37A5PQ49AS3 106 aa6.84□□□□□ -1.31
SNHG1-215ENST00000540904 LEMD1Q68G75 181 aa6.84□□□□□ -1.31
SNHG1-215ENST00000540904 SIGLEC15Q6ZMC9 328 aa6.84□□□□□ -1.31
SNHG1-215ENST00000540904 CYP2G1PQ6ZSU1 146 aa6.84□□□□□ -1.31
SNHG1-215ENST00000540904 TMEM217Q8N7C4 229 aa6.84□□□□□ -1.31
SNHG1-215ENST00000540904 STPG3Q8N7X2 389 aa6.84□□□□□ -1.31
SNHG1-215ENST00000540904 BPIFCQ8NFQ6 507 aa6.84□□□□□ -1.31
SNHG1-215ENST00000540904 OR1B1Q8NGR6 318 aa6.84□□□□□ -1.31
SNHG1-215ENST00000540904 C11orf1Q9H5F2 150 aa6.84□□□□□ -1.31
SNHG1-215ENST00000540904 NPVFQ9HCQ7 196 aa6.84□□□□□ -1.31
SNHG1-215ENST00000540904 COL7A1Q02388 2944 aa6.83□□□□□ -1.32
SNHG1-215ENST00000540904 FNDC10F2Z333 226 aa6.83□□□□□ -1.32
SNHG1-215ENST00000540904 DEDDO75618 318 aa6.83□□□□□ -1.32
SNHG1-215ENST00000540904 PTTG1O95997 202 aa6.83□□□□□ -1.32
SNHG1-215ENST00000540904 APOC4P55056 127 aa6.83□□□□□ -1.32
SNHG1-215ENST00000540904 SLC38A11Q08AI6 406 aa6.83□□□□□ -1.32
SNHG1-215ENST00000540904 C1orf194Q5T5A4 169 aa6.83□□□□□ -1.32
SNHG1-215ENST00000540904 TEPPQ6URK8 271 aa6.83□□□□□ -1.32
SNHG1-215ENST00000540904 OR8I2Q8N0Y5 310 aa6.83□□□□□ -1.32
SNHG1-215ENST00000540904 DCANP1Q8TF63 244 aa6.83□□□□□ -1.32
SNHG1-215ENST00000540904 TMEM147Q9BVK8 224 aa6.83□□□□□ -1.32
SNHG1-215ENST00000540904 GGACTQ9BVM4 153 aa6.83□□□□□ -1.32
SNHG1-215ENST00000540904 NMES1Q9C002 83 aa6.83□□□□□ -1.32
SNHG1-215ENST00000540904 SLC25A22Q9H936 323 aa6.83□□□□□ -1.32
SNHG1-215ENST00000540904 NRN1Q9NPD7 142 aa6.83□□□□□ -1.32
SNHG1-215ENST00000540904 LYRM2Q9NU23 88 aaPredicted RBP6.83□□□□□ -1.32
SNHG1-215ENST00000540904 DOK5Q9P104 306 aa6.83□□□□□ -1.32
SNHG1-215ENST00000540904 IGSF23A1L1A6 192 aa6.82□□□□□ -1.32
SNHG1-215ENST00000540904 RLN2P04090 185 aa6.82□□□□□ -1.32
SNHG1-215ENST00000540904 LINC00869P0C866 280 aa6.82□□□□□ -1.32
SNHG1-215ENST00000540904 SULT1A1P50225 295 aa6.82□□□□□ -1.32
SNHG1-215ENST00000540904 H2BFSP57053 126 aa6.82□□□□□ -1.32
SNHG1-215ENST00000540904 SELENOTP62341 195 aa6.82□□□□□ -1.32
SNHG1-215ENST00000540904 CYCSP99999 105 aaKnown RBP6.82□□□□□ -1.32
SNHG1-215ENST00000540904 PSMG4Q5JS54 123 aa6.82□□□□□ -1.32
SNHG1-215ENST00000540904 STX12Q86Y82 276 aa6.82□□□□□ -1.32
SNHG1-215ENST00000540904 TMEM252Q8N6L7 170 aa6.82□□□□□ -1.32
SNHG1-215ENST00000540904 FBXL17Q9UF56 701 aa6.82□□□□□ -1.32
SNHG1-215ENST00000540904 KIR2DL5BA0A0G2JN68 375 aa6.81□□□□□ -1.32
SNHG1-215ENST00000540904 KIR2DL5BA0A0G2JPC4 375 aa6.81□□□□□ -1.32
SNHG1-215ENST00000540904 ZNF98A6NK75 572 aa6.81□□□□□ -1.32
SNHG1-215ENST00000540904 E5RGE8 158 aa6.81□□□□□ -1.32
SNHG1-215ENST00000540904 AGPAT2O15120 278 aa6.81□□□□□ -1.32
SNHG1-215ENST00000540904 HYPMO75409 117 aa6.81□□□□□ -1.32
SNHG1-215ENST00000540904 OR5G3P0C626 314 aa6.81□□□□□ -1.32
SNHG1-215ENST00000540904 S100A11P31949 105 aa6.81□□□□□ -1.32
SNHG1-215ENST00000540904 RAP2BP61225 183 aa6.81□□□□□ -1.32
SNHG1-215ENST00000540904 SNRPD3P62318 126 aaKnown RBP6.81□□□□□ -1.32
SNHG1-215ENST00000540904 HBG1P69891 147 aa6.81□□□□□ -1.32
SNHG1-215ENST00000540904 HBG2P69892 147 aa6.81□□□□□ -1.32
SNHG1-215ENST00000540904 RAB31Q13636 194 aa6.81□□□□□ -1.32
SNHG1-215ENST00000540904 ZNF546Q86UE3 836 aa6.81□□□□□ -1.32
SNHG1-215ENST00000540904 KIR2DL5AQ8N109 375 aa6.81□□□□□ -1.32
SNHG1-215ENST00000540904 KIR2DL5BQ8NHK3 375 aa6.81□□□□□ -1.32
SNHG1-215ENST00000540904 PPP1R1CQ8WVI7 109 aa6.81□□□□□ -1.32
SNHG1-215ENST00000540904 MGST2Q99735 147 aa6.81□□□□□ -1.32
SNHG1-215ENST00000540904 SCRT1Q9BWW7 348 aa6.81□□□□□ -1.32
SNHG1-215ENST00000540904 ARL6Q9H0F7 186 aa6.81□□□□□ -1.32
SNHG1-215ENST00000540904 UQCC1Q9NVA1 299 aa6.81□□□□□ -1.32
SNHG1-215ENST00000540904 OR5AC2Q9NZP5 309 aa6.81□□□□□ -1.32
SNHG1-215ENST00000540904 SLC45A2Q9UMX9 530 aa6.81□□□□□ -1.32
SNHG1-215ENST00000540904 HIGD1AQ9Y241 93 aa6.81□□□□□ -1.32
SNHG1-215ENST00000540904 ALG5Q9Y673 324 aa6.81□□□□□ -1.32
SNHG1-215ENST00000540904 UBE2L5PA0A1B0GUS4 154 aa6.8□□□□□ -1.32
SNHG1-215ENST00000540904 KNCNA6PVL3 124 aa6.8□□□□□ -1.32
SNHG1-215ENST00000540904 H0YIZ8 118 aa6.8□□□□□ -1.32
SNHG1-215ENST00000540904 UBE2CO00762 179 aa6.8□□□□□ -1.32
SNHG1-215ENST00000540904 S100A7P31151 101 aa6.8□□□□□ -1.32
SNHG1-215ENST00000540904 GALR1P47211 349 aa6.8□□□□□ -1.32
SNHG1-215ENST00000540904 DEFB135Q30KP9 77 aa6.8□□□□□ -1.32
SNHG1-215ENST00000540904 ACTL10Q5JWF8 245 aa6.8□□□□□ -1.32
SNHG1-215ENST00000540904 Q6ZWC4 215 aa6.8□□□□□ -1.32
SNHG1-215ENST00000540904 STHQ8IWL8 128 aa6.8□□□□□ -1.32
SNHG1-215ENST00000540904 LINC00052Q96N35 136 aa6.8□□□□□ -1.32
SNHG1-215ENST00000540904 UHRF2Q96PU4 802 aa6.8□□□□□ -1.32
SNHG1-215ENST00000540904 OVOL2Q9BRP0 275 aa6.8□□□□□ -1.32
SNHG1-215ENST00000540904 SLC25A39Q9BZJ4 359 aaPredicted RBP6.8□□□□□ -1.32
SNHG1-215ENST00000540904 SLC25A31Q9H0C2 315 aa6.8□□□□□ -1.32
SNHG1-215ENST00000540904 CSTL1Q9H114 145 aa6.8□□□□□ -1.32
SNHG1-215ENST00000540904 SLC25A32Q9H2D1 315 aa6.8□□□□□ -1.32
SNHG1-215ENST00000540904 H3BRN7 92 aa6.79□□□□□ -1.32
SNHG1-215ENST00000540904 SPRY2O43597 315 aa6.79□□□□□ -1.32
SNHG1-215ENST00000540904 PET100P0DJ07 73 aa6.79□□□□□ -1.32
SNHG1-215ENST00000540904 ID1P41134 155 aa6.79□□□□□ -1.32
SNHG1-215ENST00000540904 CAMLGP49069 296 aa6.79□□□□□ -1.32
SNHG1-215ENST00000540904 PLP1P60201 277 aa6.79□□□□□ -1.32
SNHG1-215ENST00000540904 EWSR1Q01844 656 aaKnown RBP eCLIP6.79□□□□□ -1.32
SNHG1-215ENST00000540904 NHLH2Q02577 135 aa6.79□□□□□ -1.32
SNHG1-215ENST00000540904 BAXQ07812 192 aa6.79□□□□□ -1.32
SNHG1-215ENST00000540904 VWC2Q2TAL6 325 aa6.79□□□□□ -1.32
SNHG1-215ENST00000540904 S100A7AQ86SG5 101 aa6.79□□□□□ -1.32
SNHG1-215ENST00000540904 GPR82Q96P67 336 aa6.79□□□□□ -1.32
SNHG1-215ENST00000540904 SHANK2-AS3Q9BTD1 123 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms