RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 BLOC1S1P78537 153 aa5.26□□□□□ -1.57
YBX3-209ENST00000540747 RAB32Q13637 225 aa5.26□□□□□ -1.57
YBX3-209ENST00000540747 IAH1Q2TAA2 248 aaPredicted RBP5.26□□□□□ -1.57
YBX3-209ENST00000540747 LGALS9BQ3B8N2 356 aa5.26□□□□□ -1.57
YBX3-209ENST00000540747 Q56UQ5 140 aa5.26□□□□□ -1.57
YBX3-209ENST00000540747 TMEM41BQ5BJD5 291 aa5.26□□□□□ -1.57
YBX3-209ENST00000540747 PXDC1Q5TGL8 231 aa5.26□□□□□ -1.57
YBX3-209ENST00000540747 AADACL3Q5VUY0 350 aa5.26□□□□□ -1.57
YBX3-209ENST00000540747 LEMD1Q68G75 181 aa5.26□□□□□ -1.57
YBX3-209ENST00000540747 PVRIGQ6DKI7 326 aa5.26□□□□□ -1.57
YBX3-209ENST00000540747 DHRS11Q6UWP2 260 aa5.26□□□□□ -1.57
YBX3-209ENST00000540747 TOMM20LQ6UXN7 152 aa5.26□□□□□ -1.57
YBX3-209ENST00000540747 TCF24Q7RTU0 167 aa5.26□□□□□ -1.57
YBX3-209ENST00000540747 GBGT1Q8N5D6 347 aa5.26□□□□□ -1.57
YBX3-209ENST00000540747 POM121L12Q8N7R1 296 aa5.26□□□□□ -1.57
YBX3-209ENST00000540747 CCDC71LQ8N9Z2 235 aa5.26□□□□□ -1.57
YBX3-209ENST00000540747 UBAC2Q8NBM4 344 aa5.26□□□□□ -1.57
YBX3-209ENST00000540747 BPIFCQ8NFQ6 507 aa5.26□□□□□ -1.57
YBX3-209ENST00000540747 DMBX1Q8NFW5 382 aa5.26□□□□□ -1.57
YBX3-209ENST00000540747 STOML3Q8TAV4 291 aa5.26□□□□□ -1.57
YBX3-209ENST00000540747 NARS2Q96I59 477 aaKnown RBP5.26□□□□□ -1.57
YBX3-209ENST00000540747 AQP10Q96PS8 301 aa5.26□□□□□ -1.57
YBX3-209ENST00000540747 CELA1Q9UNI1 258 aa5.26□□□□□ -1.57
YBX3-209ENST00000540747 NSG2Q9Y328 171 aa5.26□□□□□ -1.57
YBX3-209ENST00000540747 OR51B2Q9Y5P1 312 aa5.26□□□□□ -1.57
YBX3-209ENST00000540747 IGKV3-7A0A075B6H7 116 aa5.25□□□□□ -1.57
YBX3-209ENST00000540747 BORCS7-ASMTA0A0B4J1R7 106 aa5.25□□□□□ -1.57
YBX3-209ENST00000540747 CRYM-AS1A6NIL9 109 aa5.25□□□□□ -1.57
YBX3-209ENST00000540747 K7EPK0 472 aa5.25□□□□□ -1.57
YBX3-209ENST00000540747 K7EQG2 157 aa5.25□□□□□ -1.57
YBX3-209ENST00000540747 PGLYRP1O75594 196 aaPredicted RBP5.25□□□□□ -1.57
YBX3-209ENST00000540747 SPP1P10451 314 aa5.25□□□□□ -1.57
YBX3-209ENST00000540747 RPL12P30050 165 aaKnown RBP5.25□□□□□ -1.57
YBX3-209ENST00000540747 MFAP4P55083 255 aa5.25□□□□□ -1.57
YBX3-209ENST00000540747 UCP3P55916 312 aa5.25□□□□□ -1.57
YBX3-209ENST00000540747 FXYD4P59646 89 aa5.25□□□□□ -1.57
YBX3-209ENST00000540747 SUPT4H1P63272 117 aaKnown RBP5.25□□□□□ -1.57
YBX3-209ENST00000540747 C12orf74Q32Q52 190 aa5.25□□□□□ -1.57
YBX3-209ENST00000540747 GGNBP1Q5YKI7 109 aa5.25□□□□□ -1.57
YBX3-209ENST00000540747 MORN3Q6PF18 240 aaPredicted RBP5.25□□□□□ -1.57
YBX3-209ENST00000540747 LGI3Q8N145 548 aa5.25□□□□□ -1.57
YBX3-209ENST00000540747 OR1S2Q8NGQ3 325 aa5.25□□□□□ -1.57
YBX3-209ENST00000540747 MOB3AQ96BX8 217 aa5.25□□□□□ -1.57
YBX3-209ENST00000540747 SAT2Q96F10 170 aaPredicted RBP5.25□□□□□ -1.57
YBX3-209ENST00000540747 GRAMD2BQ96HH9 432 aa5.25□□□□□ -1.57
YBX3-209ENST00000540747 SCRT1Q9BWW7 348 aa5.25□□□□□ -1.57
YBX3-209ENST00000540747 NAA60Q9H7X0 242 aa5.25□□□□□ -1.57
YBX3-209ENST00000540747 TREM1Q9NP99 234 aa5.25□□□□□ -1.57
YBX3-209ENST00000540747 CYTL1Q9NRR1 136 aa5.25□□□□□ -1.57
YBX3-209ENST00000540747 PRR13Q9NZ81 148 aa5.25□□□□□ -1.57
YBX3-209ENST00000540747 OR5AC2Q9NZP5 309 aa5.25□□□□□ -1.57
YBX3-209ENST00000540747 PRNDQ9UKY0 176 aa5.25□□□□□ -1.57
YBX3-209ENST00000540747 LSM5Q9Y4Y9 91 aaKnown RBP5.25□□□□□ -1.57
YBX3-209ENST00000540747 A0A1B0GU03 582 aa5.24□□□□□ -1.57
YBX3-209ENST00000540747 E5RGE8 158 aa5.24□□□□□ -1.57
YBX3-209ENST00000540747 YIF1AO95070 293 aa5.24□□□□□ -1.57
YBX3-209ENST00000540747 SCGB1D2O95969 90 aa5.24□□□□□ -1.57
YBX3-209ENST00000540747 MT-CO2P00403 227 aa5.24□□□□□ -1.57
YBX3-209ENST00000540747 KRASP01116 189 aa5.24□□□□□ -1.57
YBX3-209ENST00000540747 IGKV1-39P01597 117 aa5.24□□□□□ -1.57
YBX3-209ENST00000540747 IGKV1D-39P04432 117 aa5.24□□□□□ -1.57
YBX3-209ENST00000540747 P0DMU3 169 aa5.24□□□□□ -1.57
YBX3-209ENST00000540747 FAM231AP0DMU4 169 aa5.24□□□□□ -1.57
YBX3-209ENST00000540747 FAM231CP0DMU5 169 aa5.24□□□□□ -1.57
YBX3-209ENST00000540747 G6PCP35575 357 aa5.24□□□□□ -1.57
YBX3-209ENST00000540747 LPAR6P43657 344 aa5.24□□□□□ -1.57
YBX3-209ENST00000540747 PIGPP57054 158 aa5.24□□□□□ -1.57
YBX3-209ENST00000540747 ERVK-16P61578 105 aa5.24□□□□□ -1.57
YBX3-209ENST00000540747 PAFAH1B2P68402 229 aa5.24□□□□□ -1.57
YBX3-209ENST00000540747 IL15RAQ13261 267 aa5.24□□□□□ -1.57
YBX3-209ENST00000540747 FAM122CQ6P4D5 195 aa5.24□□□□□ -1.57
YBX3-209ENST00000540747 ZNF575Q86XF7 245 aa5.24□□□□□ -1.57
YBX3-209ENST00000540747 LHFPL5Q8TAF8 219 aa5.24□□□□□ -1.57
YBX3-209ENST00000540747 DCANP1Q8TF63 244 aa5.24□□□□□ -1.57
YBX3-209ENST00000540747 TMED6Q8WW62 240 aa5.24□□□□□ -1.57
YBX3-209ENST00000540747 RRNAD1Q96FB5 475 aaKnown RBP5.24□□□□□ -1.57
YBX3-209ENST00000540747 TMEM56Q96MV1 263 aa5.24□□□□□ -1.57
YBX3-209ENST00000540747 GINS3Q9BRX5 216 aa5.24□□□□□ -1.57
YBX3-209ENST00000540747 HINT2Q9BX68 163 aa5.24□□□□□ -1.57
YBX3-209ENST00000540747 FAM212BQ9NTI7 297 aaPredicted RBP5.24□□□□□ -1.57
YBX3-209ENST00000540747 DEFB131BA0A096LNP1 70 aa5.23□□□□□ -1.57
YBX3-209ENST00000540747 TMEM218A2RU14 115 aa5.23□□□□□ -1.57
YBX3-209ENST00000540747 F8W036 122 aa5.23□□□□□ -1.57
YBX3-209ENST00000540747 INS-IGF2F8WCM5 200 aa5.23□□□□□ -1.57
YBX3-209ENST00000540747 ST8SIA3O43173 380 aa5.23□□□□□ -1.57
YBX3-209ENST00000540747 IGHV3-48P01763 117 aa5.23□□□□□ -1.57
YBX3-209ENST00000540747 PVALBP20472 110 aaPredicted RBP5.23□□□□□ -1.57
YBX3-209ENST00000540747 CRYBB3P26998 211 aa5.23□□□□□ -1.57
YBX3-209ENST00000540747 S100GP29377 79 aa5.23□□□□□ -1.57
YBX3-209ENST00000540747 SRPXP78539 464 aa5.23□□□□□ -1.57
YBX3-209ENST00000540747 PRCDQ00LT1 54 aa5.23□□□□□ -1.57
YBX3-209ENST00000540747 SP6Q3SY56 376 aa5.23□□□□□ -1.57
YBX3-209ENST00000540747 PHLDA2Q53GA4 152 aa5.23□□□□□ -1.57
YBX3-209ENST00000540747 RPL7L1Q6DKI1 246 aaKnown RBP5.23□□□□□ -1.57
YBX3-209ENST00000540747 ZNF600Q6ZNG1 722 aa5.23□□□□□ -1.57
YBX3-209ENST00000540747 STHQ8IWL8 128 aa5.23□□□□□ -1.57
YBX3-209ENST00000540747 SVBPQ8N300 66 aa5.23□□□□□ -1.57
YBX3-209ENST00000540747 MISP3Q96FF7 219 aa5.23□□□□□ -1.57
YBX3-209ENST00000540747 NKX6-2Q9C056 277 aaPredicted RBP5.23□□□□□ -1.57
YBX3-209ENST00000540747 FKBP11Q9NYL4 201 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms