RNA–Protein interactions for RNA: ENST00000540725.5

SNHG1-213, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,374 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-213ENST00000540725 SNRPGP15A8MWD9 76 aa10.1□□□□□ -0.79
SNHG1-213ENST00000540725 GSG1LQ6UXU4 331 aa10.1□□□□□ -0.79
SNHG1-213ENST00000540725 ZNF709Q8N972 641 aa10.1□□□□□ -0.79
SNHG1-213ENST00000540725 OR4B1Q8NGF8 309 aa10.1□□□□□ -0.79
SNHG1-213ENST00000540725 PPP1R14BQ96C90 147 aa10.1□□□□□ -0.79
SNHG1-213ENST00000540725 TRGV9Q99603 122 aa10.1□□□□□ -0.79
SNHG1-213ENST00000540725 BCL7BQ9BQE9 202 aa10.1□□□□□ -0.79
SNHG1-213ENST00000540725 RFNGQ9Y644 331 aa10.1□□□□□ -0.79
SNHG1-213ENST00000540725 NACAE9PAV3 2078 aa10.1□□□□□ -0.79
SNHG1-213ENST00000540725 PIGBOS1A0A0B4J2F0 54 aa10.09□□□□□ -0.79
SNHG1-213ENST00000540725 DUXBA0A1W2PPF3 345 aa10.09□□□□□ -0.79
SNHG1-213ENST00000540725 CCDC160A6NGH7 325 aa10.09□□□□□ -0.79
SNHG1-213ENST00000540725 ISLRO14498 428 aa10.09□□□□□ -0.79
SNHG1-213ENST00000540725 PITX3O75364 302 aa10.09□□□□□ -0.79
SNHG1-213ENST00000540725 IAPPP10997 89 aa10.09□□□□□ -0.79
SNHG1-213ENST00000540725 TNFSF8P32971 234 aa10.09□□□□□ -0.79
SNHG1-213ENST00000540725 TMBIM6P55061 237 aa10.09□□□□□ -0.79
SNHG1-213ENST00000540725 RAB11AP62491 216 aa10.09□□□□□ -0.79
SNHG1-213ENST00000540725 ZNF79Q15937 498 aa10.09□□□□□ -0.79
SNHG1-213ENST00000540725 SPATA31B1PQ5VZV4 182 aa10.09□□□□□ -0.79
SNHG1-213ENST00000540725 OR8I2Q8N0Y5 310 aa10.09□□□□□ -0.79
SNHG1-213ENST00000540725 SOSTQ9BQB4 213 aa10.09□□□□□ -0.79
SNHG1-213ENST00000540725 SLC35B3Q9H1N7 401 aa10.09□□□□□ -0.79
SNHG1-213ENST00000540725 PAIP2BQ9ULR5 123 aaKnown RBP10.09□□□□□ -0.79
SNHG1-213ENST00000540725 DNAH11Q96DT5 4516 aa10.09□□□□□ -0.79
SNHG1-213ENST00000540725 IGKV1OR2-108A0A075B7D4 117 aa10.08□□□□□ -0.8
SNHG1-213ENST00000540725 TEX48A0A1B0GUV7 120 aa10.08□□□□□ -0.8
SNHG1-213ENST00000540725 A0A1B0GVY2 172 aa10.08□□□□□ -0.8
SNHG1-213ENST00000540725 FABP12A6NFH5 140 aa10.08□□□□□ -0.8
SNHG1-213ENST00000540725 F6UB75 175 aa10.08□□□□□ -0.8
SNHG1-213ENST00000540725 FAUP35544 74 aaKnown RBP10.08□□□□□ -0.8
SNHG1-213ENST00000540725 PAX9P55771 341 aa10.08□□□□□ -0.8
SNHG1-213ENST00000540725 PSG9Q00887 426 aa10.08□□□□□ -0.8
SNHG1-213ENST00000540725 FAM222AQ5U5X8 452 aa10.08□□□□□ -0.8
SNHG1-213ENST00000540725 EBLN2Q6P2I7 272 aa10.08□□□□□ -0.8
SNHG1-213ENST00000540725 TMED4Q7Z7H5 227 aa10.08□□□□□ -0.8
SNHG1-213ENST00000540725 THAP8Q8NA92 274 aa10.08□□□□□ -0.8
SNHG1-213ENST00000540725 SLIRPQ9GZT3 109 aaKnown RBP10.08□□□□□ -0.8
SNHG1-213ENST00000540725 DKK2Q9UBU2 259 aa10.08□□□□□ -0.8
SNHG1-213ENST00000540725 DYNC1H1Q14204 4646 aaKnown RBP10.08□□□□□ -0.8
SNHG1-213ENST00000540725 PKD1P98161 4303 aa10.08□□□□□ -0.8
SNHG1-213ENST00000540725 A0A0J9YX75 114 aa10.07□□□□□ -0.8
SNHG1-213ENST00000540725 M0R2N4 97 aa10.07□□□□□ -0.8
SNHG1-213ENST00000540725 MEOX2P50222 304 aa10.07□□□□□ -0.8
SNHG1-213ENST00000540725 TMEM128Q5BJH2 165 aa10.07□□□□□ -0.8
SNHG1-213ENST00000540725 FAM78BQ5VT40 261 aa10.07□□□□□ -0.8
SNHG1-213ENST00000540725 SAMD13Q5VXD3 122 aa10.07□□□□□ -0.8
SNHG1-213ENST00000540725 NIPSNAP3BQ9BS92 247 aa10.07□□□□□ -0.8
SNHG1-213ENST00000540725 RPRMQ9NS64 109 aa10.07□□□□□ -0.8
SNHG1-213ENST00000540725 GOLT1BQ9Y3E0 138 aa10.07□□□□□ -0.8
SNHG1-213ENST00000540725 RTL8CO15255 209 aa10.06□□□□□ -0.8
SNHG1-213ENST00000540725 MED6O75586 246 aa10.06□□□□□ -0.8
SNHG1-213ENST00000540725 HBE1P02100 147 aa10.06□□□□□ -0.8
SNHG1-213ENST00000540725 SLC25A6P12236 298 aa10.06□□□□□ -0.8
SNHG1-213ENST00000540725 VAMP1P23763 118 aa10.06□□□□□ -0.8
SNHG1-213ENST00000540725 C1orf158Q8N1D5 194 aa10.06□□□□□ -0.8
SNHG1-213ENST00000540725 LRTM2Q8N967 370 aa10.06□□□□□ -0.8
SNHG1-213ENST00000540725 TRIM63Q969Q1 353 aa10.06□□□□□ -0.8
SNHG1-213ENST00000540725 FAM210BQ96KR6 192 aa10.06□□□□□ -0.8
SNHG1-213ENST00000540725 C16orf92Q96LL3 132 aa10.06□□□□□ -0.8
SNHG1-213ENST00000540725 C20orf173Q96LM9 149 aa10.06□□□□□ -0.8
SNHG1-213ENST00000540725 CIB3Q96Q77 187 aaPredicted RBP10.06□□□□□ -0.8
SNHG1-213ENST00000540725 C7orf50Q9BRJ6 194 aaKnown RBP10.06□□□□□ -0.8
SNHG1-213ENST00000540725 SLC25A32Q9H2D1 315 aa10.06□□□□□ -0.8
SNHG1-213ENST00000540725 RYR1P21817 5038 aa10.05□□□□□ -0.8
SNHG1-213ENST00000540725 LOC102723971A0A1B0GUV8 181 aa10.05□□□□□ -0.8
SNHG1-213ENST00000540725 PRSS29PA6NIE9 313 aa10.05□□□□□ -0.8
SNHG1-213ENST00000540725 H3BMQ9 156 aa10.05□□□□□ -0.8
SNHG1-213ENST00000540725 NOL3O60936 208 aaKnown RBP10.05□□□□□ -0.8
SNHG1-213ENST00000540725 CFDP00746 253 aaPredicted RBP10.05□□□□□ -0.8
SNHG1-213ENST00000540725 IFNA21P01568 189 aa10.05□□□□□ -0.8
SNHG1-213ENST00000540725 GALR1P47211 349 aa10.05□□□□□ -0.8
SNHG1-213ENST00000540725 AP3S2P59780 193 aa10.05□□□□□ -0.8
SNHG1-213ENST00000540725 LGALS9BQ3B8N2 356 aa10.05□□□□□ -0.8
SNHG1-213ENST00000540725 GGNBP1Q5YKI7 109 aa10.05□□□□□ -0.8
SNHG1-213ENST00000540725 LINC00299Q6ZSB3 139 aa10.05□□□□□ -0.8
SNHG1-213ENST00000540725 UBE2DNLQ8IWF7 75 aa10.05□□□□□ -0.8
SNHG1-213ENST00000540725 MCFD2Q8NI22 146 aa10.05□□□□□ -0.8
SNHG1-213ENST00000540725 MAGT1Q9H0U3 335 aa10.05□□□□□ -0.8
SNHG1-213ENST00000540725 SLC25A22Q9H936 323 aa10.05□□□□□ -0.8
SNHG1-213ENST00000540725 PLA2G2EQ9NZK7 142 aa10.05□□□□□ -0.8
SNHG1-213ENST00000540725 DOK5Q9P104 306 aa10.05□□□□□ -0.8
SNHG1-213ENST00000540725 SLC45A2Q9UMX9 530 aa10.05□□□□□ -0.8
SNHG1-213ENST00000540725 ZNF98A6NK75 572 aa10.04□□□□□ -0.8
SNHG1-213ENST00000540725 A8MTW9 85 aa10.04□□□□□ -0.8
SNHG1-213ENST00000540725 PRSS46E5RG02 174 aa10.04□□□□□ -0.8
SNHG1-213ENST00000540725 WRBO00258 174 aa10.04□□□□□ -0.8
SNHG1-213ENST00000540725 SYNGR2O43760 224 aa10.04□□□□□ -0.8
SNHG1-213ENST00000540725 HTN3P15516 51 aa10.04□□□□□ -0.8
SNHG1-213ENST00000540725 RPP30P78346 268 aaKnown RBP10.04□□□□□ -0.8
SNHG1-213ENST00000540725 OXA1LQ15070 435 aa10.04□□□□□ -0.8
SNHG1-213ENST00000540725 RRN3P1Q2M238 152 aa10.04□□□□□ -0.8
SNHG1-213ENST00000540725 TOMM5Q8N4H5 51 aa10.04□□□□□ -0.8
SNHG1-213ENST00000540725 C17orf77Q96MU5 243 aa10.04□□□□□ -0.8
SNHG1-213ENST00000540725 RSG1Q9BU20 258 aa10.04□□□□□ -0.8
SNHG1-213ENST00000540725 TMED3Q9Y3Q3 217 aa10.04□□□□□ -0.8
SNHG1-213ENST00000540725 YTHDF2Q9Y5A9 579 aaKnown RBP10.04□□□□□ -0.8
SNHG1-213ENST00000540725 GATA2P23769 480 aaPredicted RBP10.03□□□□□ -0.8
SNHG1-213ENST00000540725 PYDC2Q56P42 97 aa10.03□□□□□ -0.8
SNHG1-213ENST00000540725 AMTNQ6UX39 209 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms