RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 LYZP61626 148 aa8.53□□□□□ -1.04
CBX3P4-202ENST00000540428 SRPXP78539 464 aa8.53□□□□□ -1.04
CBX3P4-202ENST00000540428 ZNF90Q03938 601 aa8.53□□□□□ -1.04
CBX3P4-202ENST00000540428 CLVS1Q8IUQ0 354 aaPredicted RBP8.53□□□□□ -1.04
CBX3P4-202ENST00000540428 C1orf158Q8N1D5 194 aa8.53□□□□□ -1.04
CBX3P4-202ENST00000540428 TRGV9Q99603 122 aa8.53□□□□□ -1.04
CBX3P4-202ENST00000540428 SLC35B3Q9H1N7 401 aa8.53□□□□□ -1.04
CBX3P4-202ENST00000540428 SCP2D1Q9UJQ7 156 aa8.53□□□□□ -1.04
CBX3P4-202ENST00000540428 DNAH11Q96DT5 4516 aa8.53□□□□□ -1.04
CBX3P4-202ENST00000540428 IGLV2-18A0A075B6J9 118 aa8.52□□□□□ -1.05
CBX3P4-202ENST00000540428 A0A0J9YX75 114 aa8.52□□□□□ -1.05
CBX3P4-202ENST00000540428 LOC102723971A0A1B0GUV8 181 aa8.52□□□□□ -1.05
CBX3P4-202ENST00000540428 ANKRD20A5PA0PJZ0 165 aa8.52□□□□□ -1.05
CBX3P4-202ENST00000540428 A8MTW9 85 aa8.52□□□□□ -1.05
CBX3P4-202ENST00000540428 CFDP00746 253 aaPredicted RBP8.52□□□□□ -1.05
CBX3P4-202ENST00000540428 ANXA3P12429 323 aa8.52□□□□□ -1.05
CBX3P4-202ENST00000540428 FAM3BP58499 235 aaPredicted RBP8.52□□□□□ -1.05
CBX3P4-202ENST00000540428 RRN3P1Q2M238 152 aa8.52□□□□□ -1.05
CBX3P4-202ENST00000540428 LYZL2Q7Z4W2 148 aa8.52□□□□□ -1.05
CBX3P4-202ENST00000540428 OR8I2Q8N0Y5 310 aa8.52□□□□□ -1.05
CBX3P4-202ENST00000540428 PPP1R14BQ96C90 147 aa8.52□□□□□ -1.05
CBX3P4-202ENST00000540428 C7orf50Q9BRJ6 194 aaKnown RBP8.52□□□□□ -1.05
CBX3P4-202ENST00000540428 RPRMQ9NS64 109 aa8.52□□□□□ -1.05
CBX3P4-202ENST00000540428 PRR13Q9NZ81 148 aa8.52□□□□□ -1.05
CBX3P4-202ENST00000540428 SLC45A2Q9UMX9 530 aa8.52□□□□□ -1.05
CBX3P4-202ENST00000540428 YTHDF2Q9Y5A9 579 aaKnown RBP8.52□□□□□ -1.05
CBX3P4-202ENST00000540428 DYNC1H1Q14204 4646 aaKnown RBP8.52□□□□□ -1.05
CBX3P4-202ENST00000540428 DUXBA0A1W2PPF3 345 aa8.51□□□□□ -1.05
CBX3P4-202ENST00000540428 SMIM18P0DKX4 95 aa8.51□□□□□ -1.05
CBX3P4-202ENST00000540428 AKR1C4P17516 323 aa8.51□□□□□ -1.05
CBX3P4-202ENST00000540428 ALDH3B2P48448 385 aa8.51□□□□□ -1.05
CBX3P4-202ENST00000540428 RAB11AP62491 216 aa8.51□□□□□ -1.05
CBX3P4-202ENST00000540428 IL18Q14116 193 aa8.51□□□□□ -1.05
CBX3P4-202ENST00000540428 C1orf134Q5TEV5 83 aa8.51□□□□□ -1.05
CBX3P4-202ENST00000540428 FAM78BQ5VT40 261 aa8.51□□□□□ -1.05
CBX3P4-202ENST00000540428 THAP8Q8NA92 274 aa8.51□□□□□ -1.05
CBX3P4-202ENST00000540428 C15orf53Q8NAA6 179 aa8.51□□□□□ -1.05
CBX3P4-202ENST00000540428 OR1S1Q8NH92 325 aa8.51□□□□□ -1.05
CBX3P4-202ENST00000540428 DIRAS2Q96HU8 199 aa8.51□□□□□ -1.05
CBX3P4-202ENST00000540428 IGF2BP2-AS1Q96M15 143 aa8.51□□□□□ -1.05
CBX3P4-202ENST00000540428 MAGT1Q9H0U3 335 aa8.51□□□□□ -1.05
CBX3P4-202ENST00000540428 DOK5Q9P104 306 aa8.51□□□□□ -1.05
CBX3P4-202ENST00000540428 F6UB75 175 aa8.5□□□□□ -1.05
CBX3P4-202ENST00000540428 PITX3O75364 302 aa8.5□□□□□ -1.05
CBX3P4-202ENST00000540428 HTN3P15516 51 aa8.5□□□□□ -1.05
CBX3P4-202ENST00000540428 S100A7P31151 101 aa8.5□□□□□ -1.05
CBX3P4-202ENST00000540428 GALR1P47211 349 aa8.5□□□□□ -1.05
CBX3P4-202ENST00000540428 DAD1P61803 113 aa8.5□□□□□ -1.05
CBX3P4-202ENST00000540428 GGNBP1Q5YKI7 109 aa8.5□□□□□ -1.05
CBX3P4-202ENST00000540428 OR4D5Q8NGN0 318 aa8.5□□□□□ -1.05
CBX3P4-202ENST00000540428 C16orf92Q96LL3 132 aa8.5□□□□□ -1.05
CBX3P4-202ENST00000540428 PLA2G2EQ9NZK7 142 aa8.5□□□□□ -1.05
CBX3P4-202ENST00000540428 RYR1P21817 5038 aa8.5□□□□□ -1.05
CBX3P4-202ENST00000540428 IGKV1OR2-108A0A075B7D4 117 aa8.49□□□□□ -1.05
CBX3P4-202ENST00000540428 SLC25A6P12236 298 aa8.49□□□□□ -1.05
CBX3P4-202ENST00000540428 B2MP61769 119 aa8.49□□□□□ -1.05
CBX3P4-202ENST00000540428 OR2F1Q13607 317 aa8.49□□□□□ -1.05
CBX3P4-202ENST00000540428 SPCS2Q15005 226 aa8.49□□□□□ -1.05
CBX3P4-202ENST00000540428 TMEM88Q6PEY1 159 aa8.49□□□□□ -1.05
CBX3P4-202ENST00000540428 AMTNQ6UX39 209 aa8.49□□□□□ -1.05
CBX3P4-202ENST00000540428 C20orf173Q96LM9 149 aa8.49□□□□□ -1.05
CBX3P4-202ENST00000540428 GPR82Q96P67 336 aa8.49□□□□□ -1.05
CBX3P4-202ENST00000540428 TMEM208Q9BTX3 173 aa8.49□□□□□ -1.05
CBX3P4-202ENST00000540428 RSL24D1Q9UHA3 163 aaKnown RBP8.49□□□□□ -1.05
CBX3P4-202ENST00000540428 TMED3Q9Y3Q3 217 aa8.49□□□□□ -1.05
CBX3P4-202ENST00000540428 ZNF98A6NK75 572 aa8.48□□□□□ -1.05
CBX3P4-202ENST00000540428 LYRM9A8MSI8 78 aa8.48□□□□□ -1.05
CBX3P4-202ENST00000540428 MED6O75586 246 aa8.48□□□□□ -1.05
CBX3P4-202ENST00000540428 DUSP14O95147 198 aaKnown RBP8.48□□□□□ -1.05
CBX3P4-202ENST00000540428 TSPOP30536 169 aa8.48□□□□□ -1.05
CBX3P4-202ENST00000540428 RPP30P78346 268 aaKnown RBP8.48□□□□□ -1.05
CBX3P4-202ENST00000540428 GSG1LQ6UXU4 331 aa8.48□□□□□ -1.05
CBX3P4-202ENST00000540428 GPR141Q7Z602 305 aa8.48□□□□□ -1.05
CBX3P4-202ENST00000540428 LRTM2Q8N967 370 aa8.48□□□□□ -1.05
CBX3P4-202ENST00000540428 OR1B1Q8NGR6 318 aa8.48□□□□□ -1.05
CBX3P4-202ENST00000540428 CIB3Q96Q77 187 aaPredicted RBP8.48□□□□□ -1.05
CBX3P4-202ENST00000540428 SLC25A32Q9H2D1 315 aa8.48□□□□□ -1.05
CBX3P4-202ENST00000540428 MCUBQ9NWR8 336 aa8.48□□□□□ -1.05
CBX3P4-202ENST00000540428 CCDC59Q9P031 241 aaKnown RBP8.48□□□□□ -1.05
CBX3P4-202ENST00000540428 PKD1P98161 4303 aa8.47□□□□□ -1.05
CBX3P4-202ENST00000540428 PRSS46E5RG02 174 aa8.47□□□□□ -1.05
CBX3P4-202ENST00000540428 INSP01308 110 aa8.47□□□□□ -1.05
CBX3P4-202ENST00000540428 IAPPP10997 89 aa8.47□□□□□ -1.05
CBX3P4-202ENST00000540428 TMEM128Q5BJH2 165 aa8.47□□□□□ -1.05
CBX3P4-202ENST00000540428 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.47□□□□□ -1.05
CBX3P4-202ENST00000540428 ZNF575Q86XF7 245 aa8.47□□□□□ -1.05
CBX3P4-202ENST00000540428 BPIFCQ8NFQ6 507 aa8.47□□□□□ -1.05
CBX3P4-202ENST00000540428 C17orf77Q96MU5 243 aa8.47□□□□□ -1.05
CBX3P4-202ENST00000540428 RSG1Q9BU20 258 aa8.47□□□□□ -1.05
CBX3P4-202ENST00000540428 MRPS26Q9BYN8 205 aaKnown RBP8.47□□□□□ -1.05
CBX3P4-202ENST00000540428 SLC25A22Q9H936 323 aa8.47□□□□□ -1.05
CBX3P4-202ENST00000540428 MUC4Q99102 2169 aa8.46□□□□□ -1.05
CBX3P4-202ENST00000540428 CRXO43186 299 aaPredicted RBP8.46□□□□□ -1.06
CBX3P4-202ENST00000540428 FAUP35544 74 aaKnown RBP8.46□□□□□ -1.06
CBX3P4-202ENST00000540428 CNN1P51911 297 aaKnown RBP8.46□□□□□ -1.06
CBX3P4-202ENST00000540428 OR11H7Q8NGC8 314 aa8.46□□□□□ -1.06
CBX3P4-202ENST00000540428 DYNC2LI1Q8TCX1 351 aa8.46□□□□□ -1.06
CBX3P4-202ENST00000540428 RAB2BQ8WUD1 216 aa8.46□□□□□ -1.06
CBX3P4-202ENST00000540428 SOSTQ9BQB4 213 aa8.46□□□□□ -1.06
CBX3P4-202ENST00000540428 BCL7BQ9BQE9 202 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms