RNA–Protein interactions for RNA: ENST00000540304.5

CLIP1-212, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5

Gene CLIP1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-212ENST00000540304 AMMECR1LQ6DCA0 310 aa7.73□□□□□ -1.17
CLIP1-212ENST00000540304 HCP5Q6MZN7 132 aa7.73□□□□□ -1.17
CLIP1-212ENST00000540304 Q6ZN92 141 aa7.73□□□□□ -1.17
CLIP1-212ENST00000540304 STPG3Q8N7X2 389 aa7.73□□□□□ -1.17
CLIP1-212ENST00000540304 MS4A10Q96PG2 267 aa7.73□□□□□ -1.17
CLIP1-212ENST00000540304 SIGLEC9Q9Y336 463 aa7.73□□□□□ -1.17
CLIP1-212ENST00000540304 CENPEQ02224 2701 aa7.73□□□□□ -1.17
CLIP1-212ENST00000540304 ZFP36P26651 326 aaKnown RBP7.72□□□□□ -1.17
CLIP1-212ENST00000540304 MEF2BQ02080 365 aaPredicted RBP7.72□□□□□ -1.17
CLIP1-212ENST00000540304 KLRD1Q13241 179 aa7.72□□□□□ -1.17
CLIP1-212ENST00000540304 FAM90A2PQ658T7 463 aa7.72□□□□□ -1.17
CLIP1-212ENST00000540304 OR1B1Q8NGR6 318 aa7.72□□□□□ -1.17
CLIP1-212ENST00000540304 GLMPQ8WWB7 406 aa7.72□□□□□ -1.17
CLIP1-212ENST00000540304 NIPSNAP3BQ9BS92 247 aa7.72□□□□□ -1.17
CLIP1-212ENST00000540304 ZNF586Q9NXT0 402 aa7.72□□□□□ -1.17
CLIP1-212ENST00000540304 PEF1Q9UBV8 284 aaKnown RBP7.72□□□□□ -1.17
CLIP1-212ENST00000540304 TRAV25A0A0B4J276 109 aa7.72□□□□□ -1.17
CLIP1-212ENST00000540304 OR2T8A6NH00 312 aa7.72□□□□□ -1.17
CLIP1-212ENST00000540304 OR11H12B2RN74 326 aa7.72□□□□□ -1.17
CLIP1-212ENST00000540304 TIMM23O14925 209 aa7.72□□□□□ -1.17
CLIP1-212ENST00000540304 RPL27AP46776 148 aaKnown RBP7.72□□□□□ -1.17
CLIP1-212ENST00000540304 PRR20EP86478 221 aa7.72□□□□□ -1.17
CLIP1-212ENST00000540304 PRR20CP86479 221 aa7.72□□□□□ -1.17
CLIP1-212ENST00000540304 PRR20DP86480 221 aa7.72□□□□□ -1.17
CLIP1-212ENST00000540304 PRR20BP86481 221 aa7.72□□□□□ -1.17
CLIP1-212ENST00000540304 PRR20AP86496 221 aa7.72□□□□□ -1.17
CLIP1-212ENST00000540304 TNXAQ16473 311 aa7.72□□□□□ -1.17
CLIP1-212ENST00000540304 COX19Q49B96 90 aa7.72□□□□□ -1.17
CLIP1-212ENST00000540304 TCTEX1D4Q5JR98 221 aa7.72□□□□□ -1.17
CLIP1-212ENST00000540304 VMO1Q7Z5L0 202 aa7.72□□□□□ -1.17
CLIP1-212ENST00000540304 PPP1R27Q86WC6 154 aa7.72□□□□□ -1.17
CLIP1-212ENST00000540304 OR11H1Q8NG94 326 aa7.72□□□□□ -1.17
CLIP1-212ENST00000540304 OR11H2Q8NH07 326 aa7.72□□□□□ -1.17
CLIP1-212ENST00000540304 GATAD1Q8WUU5 269 aa7.72□□□□□ -1.17
CLIP1-212ENST00000540304 MRPL27Q9P0M9 148 aaKnown RBP7.72□□□□□ -1.17
CLIP1-212ENST00000540304 FUT9Q9Y231 359 aa7.72□□□□□ -1.17
CLIP1-212ENST00000540304 IGLC7A0M8Q6 106 aa7.71□□□□□ -1.17
CLIP1-212ENST00000540304 VENTXO95231 258 aa7.71□□□□□ -1.17
CLIP1-212ENST00000540304 PLP1P60201 277 aa7.71□□□□□ -1.17
CLIP1-212ENST00000540304 SSBP2P81877 361 aaPredicted RBP7.71□□□□□ -1.17
CLIP1-212ENST00000540304 CITED2Q99967 270 aaPredicted RBP7.71□□□□□ -1.17
CLIP1-212ENST00000540304 BPESC1Q9GZL8 116 aa7.71□□□□□ -1.17
CLIP1-212ENST00000540304 IGKV1OR2-108A0A075B7D4 117 aa7.71□□□□□ -1.18
CLIP1-212ENST00000540304 TOX4O94842 621 aa7.71□□□□□ -1.18
CLIP1-212ENST00000540304 APELAP0DMC3 54 aa7.71□□□□□ -1.18
CLIP1-212ENST00000540304 RHOBP62745 196 aa7.71□□□□□ -1.18
CLIP1-212ENST00000540304 LCN2P80188 198 aa7.71□□□□□ -1.18
CLIP1-212ENST00000540304 MLANAQ16655 118 aa7.71□□□□□ -1.18
CLIP1-212ENST00000540304 SPATA31B1PQ5VZV4 182 aa7.71□□□□□ -1.18
CLIP1-212ENST00000540304 ZNF562Q6V9R5 426 aa7.71□□□□□ -1.18
CLIP1-212ENST00000540304 CFHR4Q92496 578 aa7.71□□□□□ -1.18
CLIP1-212ENST00000540304 TVP23CQ96ET8 276 aa7.71□□□□□ -1.18
CLIP1-212ENST00000540304 ZC2HC1AQ96GY0 325 aa7.71□□□□□ -1.18
CLIP1-212ENST00000540304 HILPDAQ9Y5L2 63 aa7.71□□□□□ -1.18
CLIP1-212ENST00000540304 H7BYZ3 331 aa7.7□□□□□ -1.18
CLIP1-212ENST00000540304 IGHV4-39P01824 125 aa7.7□□□□□ -1.18
CLIP1-212ENST00000540304 LINC00869P0C866 280 aa7.7□□□□□ -1.18
CLIP1-212ENST00000540304 ZNF114Q8NC26 417 aa7.7□□□□□ -1.18
CLIP1-212ENST00000540304 MRAP2Q96G30 205 aa7.7□□□□□ -1.18
CLIP1-212ENST00000540304 SSBP4Q9BWG4 385 aaPredicted RBP7.7□□□□□ -1.18
CLIP1-212ENST00000540304 SIRPDQ9H106 197 aa7.7□□□□□ -1.18
CLIP1-212ENST00000540304 FBXL15Q9H469 300 aa7.7□□□□□ -1.18
CLIP1-212ENST00000540304 UFC1Q9Y3C8 167 aa7.7□□□□□ -1.18
CLIP1-212ENST00000540304 EPG5Q9HCE0 2579 aa7.7□□□□□ -1.18
CLIP1-212ENST00000540304 A0A1W2PRD5 423 aa7.7□□□□□ -1.18
CLIP1-212ENST00000540304 A0A1W2PRF3 423 aa7.7□□□□□ -1.18
CLIP1-212ENST00000540304 A0A1W2PRM7 423 aa7.7□□□□□ -1.18
CLIP1-212ENST00000540304 TMEM250H0YL14 139 aa7.7□□□□□ -1.18
CLIP1-212ENST00000540304 PAGE4O60829 102 aa7.7□□□□□ -1.18
CLIP1-212ENST00000540304 CXorf1O96002 111 aa7.7□□□□□ -1.18
CLIP1-212ENST00000540304 REG1AP05451 166 aa7.7□□□□□ -1.18
CLIP1-212ENST00000540304 HOXB4P17483 251 aaPredicted RBP7.7□□□□□ -1.18
CLIP1-212ENST00000540304 GNB1P62873 340 aa7.7□□□□□ -1.18
CLIP1-212ENST00000540304 C19orf35Q6ZS72 473 aa7.7□□□□□ -1.18
CLIP1-212ENST00000540304 VN1R17PQ8TDU5 208 aa7.7□□□□□ -1.18
CLIP1-212ENST00000540304 UQCR10Q9UDW1 63 aa7.7□□□□□ -1.18
CLIP1-212ENST00000540304 SELENOKQ9Y6D0 94 aa7.7□□□□□ -1.18
CLIP1-212ENST00000540304 OOSP1A8MZH6 123 aa7.69□□□□□ -1.18
CLIP1-212ENST00000540304 HYPMO75409 117 aa7.69□□□□□ -1.18
CLIP1-212ENST00000540304 IGHV3-48P01763 117 aa7.69□□□□□ -1.18
CLIP1-212ENST00000540304 ARL14EPLP0DKL9 152 aa7.69□□□□□ -1.18
CLIP1-212ENST00000540304 LMO4P61968 165 aa7.69□□□□□ -1.18
CLIP1-212ENST00000540304 PNRC1Q12796 327 aaPredicted RBP7.69□□□□□ -1.18
CLIP1-212ENST00000540304 PLGLAQ15195 96 aa7.69□□□□□ -1.18
CLIP1-212ENST00000540304 MINOS1Q5TGZ0 78 aa7.69□□□□□ -1.18
CLIP1-212ENST00000540304 PVRIGQ6DKI7 326 aa7.69□□□□□ -1.18
CLIP1-212ENST00000540304 OR2T6Q8NHC8 308 aa7.69□□□□□ -1.18
CLIP1-212ENST00000540304 ACY3Q96HD9 319 aa7.69□□□□□ -1.18
CLIP1-212ENST00000540304 CCL19Q99731 98 aa7.69□□□□□ -1.18
CLIP1-212ENST00000540304 FNDC4Q9H6D8 234 aaPredicted RBP7.69□□□□□ -1.18
CLIP1-212ENST00000540304 MINOS1-NBL1R4GNA1 71 aa7.69□□□□□ -1.18
CLIP1-212ENST00000540304 A0A1B0GUS0 222 aa7.69□□□□□ -1.18
CLIP1-212ENST00000540304 NBR2O15453 112 aa7.69□□□□□ -1.18
CLIP1-212ENST00000540304 MOSP00540 346 aa7.69□□□□□ -1.18
CLIP1-212ENST00000540304 AREGP15514 252 aa7.69□□□□□ -1.18
CLIP1-212ENST00000540304 PRR31Q5SQ13 230 aa7.69□□□□□ -1.18
CLIP1-212ENST00000540304 OR4F5Q8NH21 305 aa7.69□□□□□ -1.18
CLIP1-212ENST00000540304 OR4F4Q96R69 305 aa7.69□□□□□ -1.18
CLIP1-212ENST00000540304 ZNF462Q96JM2 2506 aa7.69□□□□□ -1.18
CLIP1-212ENST00000540304 FAM208BQ5VWN6 2430 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms