RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 PSMG4Q5JS54 123 aa11.05□□□□□ -0.64
UBE3B-212ENST00000540230 CYP2G1PQ6ZSU1 146 aa11.05□□□□□ -0.64
UBE3B-212ENST00000540230 OR10P1Q8NGE3 313 aa11.05□□□□□ -0.64
UBE3B-212ENST00000540230 RNF183Q96D59 192 aa11.05□□□□□ -0.64
UBE3B-212ENST00000540230 CSTL1Q9H114 145 aa11.05□□□□□ -0.64
UBE3B-212ENST00000540230 TP53TG1Q9Y2A0 90 aa11.05□□□□□ -0.64
UBE3B-212ENST00000540230 ORM2P19652 201 aa11.04□□□□□ -0.64
UBE3B-212ENST00000540230 EWSR1Q01844 656 aaKnown RBP eCLIP11.04□□□□□ -0.64
UBE3B-212ENST00000540230 RAB32Q13637 225 aa11.04□□□□□ -0.64
UBE3B-212ENST00000540230 TRPT1Q86TN4 253 aaKnown RBP11.04□□□□□ -0.64
UBE3B-212ENST00000540230 BPIFCQ8NFQ6 507 aa11.04□□□□□ -0.64
UBE3B-212ENST00000540230 DOK5Q9P104 306 aa11.04□□□□□ -0.64
UBE3B-212ENST00000540230 FAM24AA6NFZ4 105 aa11.04□□□□□ -0.64
UBE3B-212ENST00000540230 INMT-MINDY4F8WBC2 141 aa11.04□□□□□ -0.64
UBE3B-212ENST00000540230 L7N2F9 121 aa11.04□□□□□ -0.64
UBE3B-212ENST00000540230 SIX6O95475 246 aa11.04□□□□□ -0.64
UBE3B-212ENST00000540230 CA1P00915 261 aaPredicted RBP11.04□□□□□ -0.64
UBE3B-212ENST00000540230 DEFB1P60022 68 aa11.04□□□□□ -0.64
UBE3B-212ENST00000540230 S100A10P60903 97 aa11.04□□□□□ -0.64
UBE3B-212ENST00000540230 VAMP2P63027 116 aa11.04□□□□□ -0.64
UBE3B-212ENST00000540230 SLC38A11Q08AI6 406 aa11.04□□□□□ -0.64
UBE3B-212ENST00000540230 STHQ8IWL8 128 aa11.04□□□□□ -0.64
UBE3B-212ENST00000540230 PPP1R14BQ96C90 147 aa11.04□□□□□ -0.64
UBE3B-212ENST00000540230 C17orf77Q96MU5 243 aa11.04□□□□□ -0.64
UBE3B-212ENST00000540230 SLC25A32Q9H2D1 315 aa11.04□□□□□ -0.64
UBE3B-212ENST00000540230 A0A0J9YWU9 116 aa11.03□□□□□ -0.64
UBE3B-212ENST00000540230 SOCS3O14543 225 aa11.03□□□□□ -0.64
UBE3B-212ENST00000540230 CFDP00746 253 aaPredicted RBP11.03□□□□□ -0.64
UBE3B-212ENST00000540230 GIG44P09565 113 aaPredicted RBP11.03□□□□□ -0.64
UBE3B-212ENST00000540230 NUP62P37198 522 aaPredicted RBP11.03□□□□□ -0.64
UBE3B-212ENST00000540230 ACTL10Q5JWF8 245 aa11.03□□□□□ -0.64
UBE3B-212ENST00000540230 OR1B1Q8NGR6 318 aa11.03□□□□□ -0.64
UBE3B-212ENST00000540230 MARVELD1Q9BSK0 173 aa11.03□□□□□ -0.64
UBE3B-212ENST00000540230 SLC25A22Q9H936 323 aa11.03□□□□□ -0.64
UBE3B-212ENST00000540230 NPVFQ9HCQ7 196 aa11.03□□□□□ -0.64
UBE3B-212ENST00000540230 MGAT4CQ9UBM8 478 aa11.03□□□□□ -0.64
UBE3B-212ENST00000540230 RYR2Q92736 4967 aa11.03□□□□□ -0.64
UBE3B-212ENST00000540230 ZNF98A6NK75 572 aa11.02□□□□□ -0.65
UBE3B-212ENST00000540230 FNDC10F2Z333 226 aa11.02□□□□□ -0.65
UBE3B-212ENST00000540230 GOSR2O14653 212 aa11.02□□□□□ -0.65
UBE3B-212ENST00000540230 CST7O76096 145 aa11.02□□□□□ -0.65
UBE3B-212ENST00000540230 LINC00869P0C866 280 aa11.02□□□□□ -0.65
UBE3B-212ENST00000540230 C4BPBP20851 252 aa11.02□□□□□ -0.65
UBE3B-212ENST00000540230 BCAP31P51572 246 aa11.02□□□□□ -0.65
UBE3B-212ENST00000540230 CAV2P51636 162 aa11.02□□□□□ -0.65
UBE3B-212ENST00000540230 C1orf194Q5T5A4 169 aa11.02□□□□□ -0.65
UBE3B-212ENST00000540230 OR8I2Q8N0Y5 310 aa11.02□□□□□ -0.65
UBE3B-212ENST00000540230 SCRT1Q9BWW7 348 aa11.02□□□□□ -0.65
UBE3B-212ENST00000540230 GPN1Q9HCN4 374 aaPredicted RBP11.02□□□□□ -0.65
UBE3B-212ENST00000540230 PFDN2Q9UHV9 154 aa11.02□□□□□ -0.65
UBE3B-212ENST00000540230 IGSF23A1L1A6 192 aa11.01□□□□□ -0.65
UBE3B-212ENST00000540230 H3BRN7 92 aa11.01□□□□□ -0.65
UBE3B-212ENST00000540230 TEPPQ6URK8 271 aa11.01□□□□□ -0.65
UBE3B-212ENST00000540230 TMEM217Q8N7C4 229 aa11.01□□□□□ -0.65
UBE3B-212ENST00000540230 TMEM147Q9BVK8 224 aa11.01□□□□□ -0.65
UBE3B-212ENST00000540230 FBXL17Q9UF56 701 aa11.01□□□□□ -0.65
UBE3B-212ENST00000540230 SLC45A2Q9UMX9 530 aa11.01□□□□□ -0.65
UBE3B-212ENST00000540230 PRAF2O60831 178 aa11□□□□□ -0.65
UBE3B-212ENST00000540230 DEDDO75618 318 aa11□□□□□ -0.65
UBE3B-212ENST00000540230 DEFA1P59665 94 aa11□□□□□ -0.65
UBE3B-212ENST00000540230 DEFA3P59666 94 aa11□□□□□ -0.65
UBE3B-212ENST00000540230 SNRPD3P62318 126 aaKnown RBP11□□□□□ -0.65
UBE3B-212ENST00000540230 GDF5OSQ5U4N7 250 aa11□□□□□ -0.65
UBE3B-212ENST00000540230 PATE2Q6UY27 113 aa11□□□□□ -0.65
UBE3B-212ENST00000540230 UHRF2Q96PU4 802 aa11□□□□□ -0.65
UBE3B-212ENST00000540230 MGST2Q99735 147 aa11□□□□□ -0.65
UBE3B-212ENST00000540230 SLC25A39Q9BZJ4 359 aaPredicted RBP11□□□□□ -0.65
UBE3B-212ENST00000540230 SEPSECSQ9HD40 501 aaKnown RBP11□□□□□ -0.65
UBE3B-212ENST00000540230 LYRM2Q9NU23 88 aaPredicted RBP11□□□□□ -0.65
UBE3B-212ENST00000540230 AGPAT2O15120 278 aa10.99□□□□□ -0.65
UBE3B-212ENST00000540230 PLP1P60201 277 aa10.99□□□□□ -0.65
UBE3B-212ENST00000540230 TMEM252Q8N6L7 170 aa10.99□□□□□ -0.65
UBE3B-212ENST00000540230 GGACTQ9BVM4 153 aa10.99□□□□□ -0.65
UBE3B-212ENST00000540230 TENM2Q9NT68 2774 aa10.99□□□□□ -0.65
UBE3B-212ENST00000540230 DNAH1Q9P2D7 4330 aa10.99□□□□□ -0.65
UBE3B-212ENST00000540230 OR5G3P0C626 314 aa10.99□□□□□ -0.65
UBE3B-212ENST00000540230 PVALBP20472 110 aaPredicted RBP10.99□□□□□ -0.65
UBE3B-212ENST00000540230 SELENOTP62341 195 aa10.99□□□□□ -0.65
UBE3B-212ENST00000540230 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.99□□□□□ -0.65
UBE3B-212ENST00000540230 OR11H2Q8NH07 326 aa10.99□□□□□ -0.65
UBE3B-212ENST00000540230 IL17DQ8TAD2 202 aa10.99□□□□□ -0.65
UBE3B-212ENST00000540230 GATAD1Q8WUU5 269 aa10.99□□□□□ -0.65
UBE3B-212ENST00000540230 C20orf173Q96LM9 149 aa10.99□□□□□ -0.65
UBE3B-212ENST00000540230 LINC00052Q96N35 136 aa10.99□□□□□ -0.65
UBE3B-212ENST00000540230 RARRES2Q99969 163 aa10.99□□□□□ -0.65
UBE3B-212ENST00000540230 SHANK2-AS3Q9BTD1 123 aa10.99□□□□□ -0.65
UBE3B-212ENST00000540230 ARL6Q9H0F7 186 aa10.99□□□□□ -0.65
UBE3B-212ENST00000540230 HIGD1AQ9Y241 93 aa10.99□□□□□ -0.65
UBE3B-212ENST00000540230 HYDINQ4G0P3 5121 aa10.98□□□□□ -0.65
UBE3B-212ENST00000540230 H0YIZ8 118 aa10.98□□□□□ -0.65
UBE3B-212ENST00000540230 H3BMM0 161 aa10.98□□□□□ -0.65
UBE3B-212ENST00000540230 HYPMO75409 117 aa10.98□□□□□ -0.65
UBE3B-212ENST00000540230 PSMB3P49720 205 aa10.98□□□□□ -0.65
UBE3B-212ENST00000540230 H2BFSP57053 126 aa10.98□□□□□ -0.65
UBE3B-212ENST00000540230 RAP2BP61225 183 aa10.98□□□□□ -0.65
UBE3B-212ENST00000540230 LRRC37A5PQ49AS3 106 aa10.98□□□□□ -0.65
UBE3B-212ENST00000540230 RSG1Q9BU20 258 aa10.98□□□□□ -0.65
UBE3B-212ENST00000540230 CLEC5AQ9NY25 188 aa10.98□□□□□ -0.65
UBE3B-212ENST00000540230 OR5AC2Q9NZP5 309 aa10.98□□□□□ -0.65
UBE3B-212ENST00000540230 F6UB75 175 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms