RNA–Protein interactions for RNA: ENST00000540128.1

TRIM65-202, Transcript of tripartite motif containing 65, humanhuman

TSL 3

Gene TRIM65, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-202ENST00000540128 CHAC2Q8WUX2 184 aa16.46■□□□□ 0.23
TRIM65-202ENST00000540128 MS4A6AQ9H2W1 248 aa16.46■□□□□ 0.23
TRIM65-202ENST00000540128 AGPAT2O15120 278 aa16.45■□□□□ 0.22
TRIM65-202ENST00000540128 DEFB125Q8N687 156 aa16.45■□□□□ 0.22
TRIM65-202ENST00000540128 MGST2Q99735 147 aa16.45■□□□□ 0.22
TRIM65-202ENST00000540128 RPL11P62913 178 aaKnown RBP16.44■□□□□ 0.22
TRIM65-202ENST00000540128 ODF3L2Q3SX64 289 aa16.44■□□□□ 0.22
TRIM65-202ENST00000540128 ZNF546Q86UE3 836 aa16.44■□□□□ 0.22
TRIM65-202ENST00000540128 GBGT1Q8N5D6 347 aa16.44■□□□□ 0.22
TRIM65-202ENST00000540128 TUBA4BQ9H853 241 aa16.44■□□□□ 0.22
TRIM65-202ENST00000540128 MBD2Q9UBB5 411 aa16.44■□□□□ 0.22
TRIM65-202ENST00000540128 IGKV3-7A0A075B6H7 116 aa16.43■□□□□ 0.22
TRIM65-202ENST00000540128 GIPP09681 153 aaPredicted RBP16.43■□□□□ 0.22
TRIM65-202ENST00000540128 LINC00869P0C866 280 aa16.43■□□□□ 0.22
TRIM65-202ENST00000540128 NHLRC4P0CG21 123 aaPredicted RBP16.43■□□□□ 0.22
TRIM65-202ENST00000540128 S100A7P31151 101 aa16.43■□□□□ 0.22
TRIM65-202ENST00000540128 RAB31Q13636 194 aa16.43■□□□□ 0.22
TRIM65-202ENST00000540128 PXDC1Q5TGL8 231 aa16.43■□□□□ 0.22
TRIM65-202ENST00000540128 WFDC10AQ9H1F0 79 aa16.43■□□□□ 0.22
TRIM65-202ENST00000540128 K7EQG2 157 aa16.42■□□□□ 0.22
TRIM65-202ENST00000540128 DNASE2O00115 360 aaPredicted RBP16.42■□□□□ 0.22
TRIM65-202ENST00000540128 HYPMO75409 117 aa16.42■□□□□ 0.22
TRIM65-202ENST00000540128 ORM2P19652 201 aa16.42■□□□□ 0.22
TRIM65-202ENST00000540128 TFPI2P48307 235 aa16.42■□□□□ 0.22
TRIM65-202ENST00000540128 SBSPONQ8IVN8 264 aa16.42■□□□□ 0.22
TRIM65-202ENST00000540128 OR5C1Q8NGR4 320 aa16.42■□□□□ 0.22
TRIM65-202ENST00000540128 OR1B1Q8NGR6 318 aa16.42■□□□□ 0.22
TRIM65-202ENST00000540128 DCANP1Q8TF63 244 aa16.42■□□□□ 0.22
TRIM65-202ENST00000540128 FBXL17Q9UF56 701 aa16.42■□□□□ 0.22
TRIM65-202ENST00000540128 CAMLGP49069 296 aa16.41■□□□□ 0.22
TRIM65-202ENST00000540128 RAP2BP61225 183 aa16.41■□□□□ 0.22
TRIM65-202ENST00000540128 SIGLEC15Q6ZMC9 328 aa16.41■□□□□ 0.22
TRIM65-202ENST00000540128 THAP6Q8TBB0 222 aa16.41■□□□□ 0.22
TRIM65-202ENST00000540128 SRD5A3Q9H8P0 318 aa16.41■□□□□ 0.22
TRIM65-202ENST00000540128 RBMY1BA6NDE4 496 aaKnown RBP16.4■□□□□ 0.22
TRIM65-202ENST00000540128 RBMY1EA6NEQ0 496 aaKnown RBP16.4■□□□□ 0.22
TRIM65-202ENST00000540128 ZNF98A6NK75 572 aa16.4■□□□□ 0.22
TRIM65-202ENST00000540128 MPDU1O75352 247 aa16.4■□□□□ 0.22
TRIM65-202ENST00000540128 RBMY1DP0C7P1 496 aaKnown RBP16.4■□□□□ 0.22
TRIM65-202ENST00000540128 RPL12P30050 165 aaKnown RBP16.4■□□□□ 0.22
TRIM65-202ENST00000540128 FGL1Q08830 312 aa16.4■□□□□ 0.22
TRIM65-202ENST00000540128 WFDC3Q8IUB2 231 aa16.4■□□□□ 0.22
TRIM65-202ENST00000540128 STXBP6Q8NFX7 210 aa16.4■□□□□ 0.22
TRIM65-202ENST00000540128 PPP1R14BQ96C90 147 aa16.4■□□□□ 0.22
TRIM65-202ENST00000540128 CITED4Q96RK1 184 aa16.4■□□□□ 0.22
TRIM65-202ENST00000540128 GGTLC1Q9BX51 225 aa16.4■□□□□ 0.22
TRIM65-202ENST00000540128 SEPSECSQ9HD40 501 aaKnown RBP16.4■□□□□ 0.22
TRIM65-202ENST00000540128 UBQLN2Q9UHD9 624 aa16.4■□□□□ 0.22
TRIM65-202ENST00000540128 HSPB11Q9Y547 144 aa16.4■□□□□ 0.22
TRIM65-202ENST00000540128 UBE2L5PA0A1B0GUS4 154 aa16.39■□□□□ 0.21
TRIM65-202ENST00000540128 RPL29P47914 159 aaKnown RBP16.39■□□□□ 0.21
TRIM65-202ENST00000540128 PRR20EP86478 221 aa16.39■□□□□ 0.21
TRIM65-202ENST00000540128 PRR20CP86479 221 aa16.39■□□□□ 0.21
TRIM65-202ENST00000540128 PRR20DP86480 221 aa16.39■□□□□ 0.21
TRIM65-202ENST00000540128 PRR20BP86481 221 aa16.39■□□□□ 0.21
TRIM65-202ENST00000540128 PRR20AP86496 221 aa16.39■□□□□ 0.21
TRIM65-202ENST00000540128 PATE2Q6UY27 113 aa16.39■□□□□ 0.21
TRIM65-202ENST00000540128 OR8I2Q8N0Y5 310 aa16.39■□□□□ 0.21
TRIM65-202ENST00000540128 ASCL2Q99929 193 aa16.39■□□□□ 0.21
TRIM65-202ENST00000540128 SHANK2-AS3Q9BTD1 123 aa16.39■□□□□ 0.21
TRIM65-202ENST00000540128 SLC25A39Q9BZJ4 359 aaPredicted RBP16.39■□□□□ 0.21
TRIM65-202ENST00000540128 MAP6D1Q9H9H5 199 aa16.39■□□□□ 0.21
TRIM65-202ENST00000540128 NRN1Q9NPD7 142 aa16.39■□□□□ 0.21
TRIM65-202ENST00000540128 HIGD1AQ9Y241 93 aa16.39■□□□□ 0.21
TRIM65-202ENST00000540128 H3BRN7 92 aa16.38■□□□□ 0.21
TRIM65-202ENST00000540128 OPCMLQ14982 345 aa16.38■□□□□ 0.21
TRIM65-202ENST00000540128 Q5BKY6 102 aa16.38■□□□□ 0.21
TRIM65-202ENST00000540128 S100A7AQ86SG5 101 aa16.38■□□□□ 0.21
TRIM65-202ENST00000540128 ARL6Q9H0F7 186 aa16.38■□□□□ 0.21
TRIM65-202ENST00000540128 DOK5Q9P104 306 aa16.38■□□□□ 0.21
TRIM65-202ENST00000540128 OR5G3P0C626 314 aa16.37■□□□□ 0.21
TRIM65-202ENST00000540128 FGF7P21781 194 aa16.37■□□□□ 0.21
TRIM65-202ENST00000540128 CLINT1Q14677 625 aa16.37■□□□□ 0.21
TRIM65-202ENST00000540128 HAGHQ16775 308 aa16.37■□□□□ 0.21
TRIM65-202ENST00000540128 MIC13Q5XKP0 118 aa16.37■□□□□ 0.21
TRIM65-202ENST00000540128 FAM24BQ8N5W8 94 aa16.37■□□□□ 0.21
TRIM65-202ENST00000540128 GPR82Q96P67 336 aa16.37■□□□□ 0.21
TRIM65-202ENST00000540128 ELOA3CA0A087WX78 387 aaPredicted RBP16.36■□□□□ 0.21
TRIM65-202ENST00000540128 TMEM37Q8WXS4 190 aa16.36■□□□□ 0.21
TRIM65-202ENST00000540128 ATP5SQ99766 215 aa16.36■□□□□ 0.21
TRIM65-202ENST00000540128 ARV1Q9H2C2 271 aa16.36■□□□□ 0.21
TRIM65-202ENST00000540128 SLC25A32Q9H2D1 315 aa16.36■□□□□ 0.21
TRIM65-202ENST00000540128 DNAH9Q9NYC9 4486 aa16.36■□□□□ 0.21
TRIM65-202ENST00000540128 Q6ZRG5 221 aa16.35■□□□□ 0.21
TRIM65-202ENST00000540128 TM2D3Q9BRN9 247 aa16.35■□□□□ 0.21
TRIM65-202ENST00000540128 SCRT1Q9BWW7 348 aa16.35■□□□□ 0.21
TRIM65-202ENST00000540128 NPCDR1Q9BY65 106 aa16.35■□□□□ 0.21
TRIM65-202ENST00000540128 WDR61Q9GZS3 305 aaKnown RBP16.35■□□□□ 0.21
TRIM65-202ENST00000540128 DNAJC4Q9NNZ3 241 aa16.35■□□□□ 0.21
TRIM65-202ENST00000540128 RNF24Q9Y225 148 aa16.35■□□□□ 0.21
TRIM65-202ENST00000540128 GALR1P47211 349 aa16.34■□□□□ 0.21
TRIM65-202ENST00000540128 DEFB131AP59861 70 aa16.34■□□□□ 0.21
TRIM65-202ENST00000540128 APRG1Q8IVJ8 170 aa16.34■□□□□ 0.21
TRIM65-202ENST00000540128 C17orf77Q96MU5 243 aa16.34■□□□□ 0.21
TRIM65-202ENST00000540128 UHRF2Q96PU4 802 aa16.34■□□□□ 0.21
TRIM65-202ENST00000540128 SLC25A22Q9H936 323 aa16.34■□□□□ 0.21
TRIM65-202ENST00000540128 SLC39A9Q9NUM3 307 aa16.34■□□□□ 0.21
TRIM65-202ENST00000540128 LOC102724200A0A096LPH7 203 aaPredicted RBP16.33■□□□□ 0.2
TRIM65-202ENST00000540128 SOCS3O14543 225 aa16.33■□□□□ 0.2
TRIM65-202ENST00000540128 B2MP61769 119 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms