RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 EIF5AL1Q6IS14 154 aaKnown RBP14.43□□□□□ -0.1
TNFRSF1A-213ENST00000540022 REC114Q7Z4M0 266 aa14.43□□□□□ -0.1
TNFRSF1A-213ENST00000540022 PHYHIPLQ96FC7 376 aa14.43□□□□□ -0.1
TNFRSF1A-213ENST00000540022 COX7A2P2O60397 106 aa14.42□□□□□ -0.1
TNFRSF1A-213ENST00000540022 M6PRP20645 277 aa14.42□□□□□ -0.1
TNFRSF1A-213ENST00000540022 ACOT6Q3I5F7 207 aaPredicted RBP14.42□□□□□ -0.1
TNFRSF1A-213ENST00000540022 TM4SF20Q53R12 229 aa14.42□□□□□ -0.1
TNFRSF1A-213ENST00000540022 OR1L4Q8NGR5 311 aa14.42□□□□□ -0.1
TNFRSF1A-213ENST00000540022 UHRF2Q96PU4 802 aa14.42□□□□□ -0.1
TNFRSF1A-213ENST00000540022 DNAJC4Q9NNZ3 241 aa14.42□□□□□ -0.1
TNFRSF1A-213ENST00000540022 RPRMQ9NS64 109 aa14.42□□□□□ -0.1
TNFRSF1A-213ENST00000540022 ELOA3CA0A087WX78 387 aaPredicted RBP14.41□□□□□ -0.1
TNFRSF1A-213ENST00000540022 FAM74A1Q5RGS3 127 aa14.41□□□□□ -0.1
TNFRSF1A-213ENST00000540022 AKR1C8PQ5T2L2 129 aa14.41□□□□□ -0.1
TNFRSF1A-213ENST00000540022 C10orf113Q5VZT2 155 aa14.41□□□□□ -0.1
TNFRSF1A-213ENST00000540022 TEX261Q6UWH6 196 aa14.41□□□□□ -0.1
TNFRSF1A-213ENST00000540022 OR4F17Q8NGA8 305 aa14.41□□□□□ -0.1
TNFRSF1A-213ENST00000540022 OR10G4Q8NGN3 311 aa14.41□□□□□ -0.1
TNFRSF1A-213ENST00000540022 OR10G9Q8NGN4 311 aa14.41□□□□□ -0.1
TNFRSF1A-213ENST00000540022 OR10G7Q8NGN6 311 aa14.41□□□□□ -0.1
TNFRSF1A-213ENST00000540022 GATAD1Q8WUU5 269 aa14.41□□□□□ -0.1
TNFRSF1A-213ENST00000540022 OR4F4Q96R69 305 aa14.41□□□□□ -0.1
TNFRSF1A-213ENST00000540022 PFDN5Q99471 154 aa14.41□□□□□ -0.1
TNFRSF1A-213ENST00000540022 SEPSECSQ9HD40 501 aaKnown RBP14.41□□□□□ -0.1
TNFRSF1A-213ENST00000540022 RABAC1Q9UI14 185 aa14.41□□□□□ -0.1
TNFRSF1A-213ENST00000540022 HIGD1AQ9Y241 93 aa14.41□□□□□ -0.1
TNFRSF1A-213ENST00000540022 TMEM213A2RRL7 107 aa14.41□□□□□ -0.1
TNFRSF1A-213ENST00000540022 A8MWP6 167 aa14.41□□□□□ -0.1
TNFRSF1A-213ENST00000540022 K7EMT4 169 aa14.41□□□□□ -0.1
TNFRSF1A-213ENST00000540022 MBP02144 154 aa14.41□□□□□ -0.1
TNFRSF1A-213ENST00000540022 PF4P02776 101 aa14.41□□□□□ -0.1
TNFRSF1A-213ENST00000540022 EDN2P20800 178 aa14.41□□□□□ -0.1
TNFRSF1A-213ENST00000540022 TMEM41BQ5BJD5 291 aa14.41□□□□□ -0.1
TNFRSF1A-213ENST00000540022 MORN5Q5VZ52 161 aa14.41□□□□□ -0.1
TNFRSF1A-213ENST00000540022 RPP25LQ8N5L8 163 aaKnown RBP14.41□□□□□ -0.1
TNFRSF1A-213ENST00000540022 DAZ1Q9NQZ3 744 aaKnown RBP14.41□□□□□ -0.1
TNFRSF1A-213ENST00000540022 UFC1Q9Y3C8 167 aa14.41□□□□□ -0.1
TNFRSF1A-213ENST00000540022 IGHV3-49A0A0A0MS15 119 aa14.4□□□□□ -0.1
TNFRSF1A-213ENST00000540022 APOHP02749 345 aaPredicted RBP14.4□□□□□ -0.1
TNFRSF1A-213ENST00000540022 NPPCP23582 126 aa14.4□□□□□ -0.1
TNFRSF1A-213ENST00000540022 CRYBB3P26998 211 aa14.4□□□□□ -0.1
TNFRSF1A-213ENST00000540022 IFITM2Q01629 132 aa14.4□□□□□ -0.1
TNFRSF1A-213ENST00000540022 FAM78BQ5VT40 261 aa14.4□□□□□ -0.1
TNFRSF1A-213ENST00000540022 LINC00305Q7Z4B0 112 aa14.4□□□□□ -0.1
TNFRSF1A-213ENST00000540022 METTL26Q96S19 204 aa14.4□□□□□ -0.1
TNFRSF1A-213ENST00000540022 SLC25A39Q9BZJ4 359 aaPredicted RBP14.4□□□□□ -0.1
TNFRSF1A-213ENST00000540022 IGHV3OR16-13A0A075B7E8 117 aa14.39□□□□□ -0.11
TNFRSF1A-213ENST00000540022 IGHV3-74A0A0B4J1X5 117 aa14.39□□□□□ -0.11
TNFRSF1A-213ENST00000540022 UMAD1C9J7I0 102 aa14.39□□□□□ -0.11
TNFRSF1A-213ENST00000540022 EIF3GO75821 320 aaKnown RBP eCLIP14.39□□□□□ -0.11
TNFRSF1A-213ENST00000540022 FHITP49789 147 aa14.39□□□□□ -0.11
TNFRSF1A-213ENST00000540022 SPATA31B1PQ5VZV4 182 aa14.39□□□□□ -0.11
TNFRSF1A-213ENST00000540022 FAM122CQ6P4D5 195 aa14.39□□□□□ -0.11
TNFRSF1A-213ENST00000540022 LINC00482Q8N8I6 264 aa14.39□□□□□ -0.11
TNFRSF1A-213ENST00000540022 ZNF680Q8NEM1 530 aa14.39□□□□□ -0.11
TNFRSF1A-213ENST00000540022 OR9G4Q8NGQ1 327 aa14.39□□□□□ -0.11
TNFRSF1A-213ENST00000540022 U3KQE9 123 aa14.39□□□□□ -0.11
TNFRSF1A-213ENST00000540022 H3BRN7 92 aa14.38□□□□□ -0.11
TNFRSF1A-213ENST00000540022 OVOL1O14753 267 aa14.38□□□□□ -0.11
TNFRSF1A-213ENST00000540022 SULT1A2P50226 295 aa14.38□□□□□ -0.11
TNFRSF1A-213ENST00000540022 SHANK2-AS3Q9BTD1 123 aa14.38□□□□□ -0.11
TNFRSF1A-213ENST00000540022 SCRT1Q9BWW7 348 aa14.38□□□□□ -0.11
TNFRSF1A-213ENST00000540022 IGHV7-4-1A0A0J9YVY3 117 aa14.37□□□□□ -0.11
TNFRSF1A-213ENST00000540022 C2orf70A6NJV1 201 aa14.37□□□□□ -0.11
TNFRSF1A-213ENST00000540022 ZNF726P1Q15940 193 aa14.37□□□□□ -0.11
TNFRSF1A-213ENST00000540022 LEMD1Q68G75 181 aa14.37□□□□□ -0.11
TNFRSF1A-213ENST00000540022 IL34Q6ZMJ4 242 aa14.37□□□□□ -0.11
TNFRSF1A-213ENST00000540022 ADAMTSL5Q6ZMM2 481 aa14.37□□□□□ -0.11
TNFRSF1A-213ENST00000540022 MIR17HGQ75NE6 70 aa14.37□□□□□ -0.11
TNFRSF1A-213ENST00000540022 RNF2Q99496 336 aa14.37□□□□□ -0.11
TNFRSF1A-213ENST00000540022 SLC25A22Q9H936 323 aa14.37□□□□□ -0.11
TNFRSF1A-213ENST00000540022 PEMTQ9UBM1 199 aa14.37□□□□□ -0.11
TNFRSF1A-213ENST00000540022 SMPXQ9UHP9 88 aa14.37□□□□□ -0.11
TNFRSF1A-213ENST00000540022 FUT9Q9Y231 359 aa14.37□□□□□ -0.11
TNFRSF1A-213ENST00000540022 TRAV5A0A0B4J249 113 aa14.36□□□□□ -0.11
TNFRSF1A-213ENST00000540022 IGHV3-66A0A0C4DH42 116 aa14.36□□□□□ -0.11
TNFRSF1A-213ENST00000540022 ZNF98A6NK75 572 aa14.36□□□□□ -0.11
TNFRSF1A-213ENST00000540022 SEC14L6B5MCN3 397 aa14.36□□□□□ -0.11
TNFRSF1A-213ENST00000540022 BUB3O43684 328 aa14.36□□□□□ -0.11
TNFRSF1A-213ENST00000540022 CDC34P49427 236 aaPredicted RBP14.36□□□□□ -0.11
TNFRSF1A-213ENST00000540022 RHOBP62745 196 aa14.36□□□□□ -0.11
TNFRSF1A-213ENST00000540022 SSX7Q7RTT5 188 aa14.36□□□□□ -0.11
TNFRSF1A-213ENST00000540022 FAM213BQ8TBF2 198 aa14.36□□□□□ -0.11
TNFRSF1A-213ENST00000540022 A0A1W2PPV4 95 aa14.36□□□□□ -0.11
TNFRSF1A-213ENST00000540022 IFNA7P01567 189 aa14.36□□□□□ -0.11
TNFRSF1A-213ENST00000540022 RAB5CP51148 216 aa14.36□□□□□ -0.11
TNFRSF1A-213ENST00000540022 RAB24Q969Q5 203 aa14.36□□□□□ -0.11
TNFRSF1A-213ENST00000540022 RHPN1-AS1Q9BWJ2 59 aa14.36□□□□□ -0.11
TNFRSF1A-213ENST00000540022 MRPL32Q9BYC8 188 aaKnown RBP14.36□□□□□ -0.11
TNFRSF1A-213ENST00000540022 ACTR3CQ9C0K3 210 aaPredicted RBP14.36□□□□□ -0.11
TNFRSF1A-213ENST00000540022 M0QZ24 198 aa14.35□□□□□ -0.11
TNFRSF1A-213ENST00000540022 HMGB3O15347 200 aaKnown RBP14.35□□□□□ -0.11
TNFRSF1A-213ENST00000540022 CSN3P07498 182 aa14.35□□□□□ -0.11
TNFRSF1A-213ENST00000540022 C8orf88P0DMB2 117 aa14.35□□□□□ -0.11
TNFRSF1A-213ENST00000540022 FOLR2P14207 255 aa14.35□□□□□ -0.11
TNFRSF1A-213ENST00000540022 CBLN1P23435 193 aa14.35□□□□□ -0.11
TNFRSF1A-213ENST00000540022 RNF141Q8WVD5 230 aa14.35□□□□□ -0.11
TNFRSF1A-213ENST00000540022 CHEK1O14757 476 aa14.34□□□□□ -0.11
TNFRSF1A-213ENST00000540022 DPPA3Q6W0C5 159 aa14.34□□□□□ -0.11
TNFRSF1A-213ENST00000540022 S100A7AQ86SG5 101 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms