RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 KIR2DL5BA0A0G2JN68 375 aa13.47□□□□□ -0.25
SNRPA1-203ENST00000540017 KIR2DL5BA0A0G2JPC4 375 aa13.47□□□□□ -0.25
SNRPA1-203ENST00000540017 IGSF23A1L1A6 192 aa13.47□□□□□ -0.25
SNRPA1-203ENST00000540017 CFDP00746 253 aaPredicted RBP13.47□□□□□ -0.25
SNRPA1-203ENST00000540017 APOC4P55056 127 aa13.47□□□□□ -0.25
SNRPA1-203ENST00000540017 H2BFSP57053 126 aa13.47□□□□□ -0.25
SNRPA1-203ENST00000540017 SLC38A11Q08AI6 406 aa13.47□□□□□ -0.25
SNRPA1-203ENST00000540017 KIR2DL5AQ8N109 375 aa13.47□□□□□ -0.25
SNRPA1-203ENST00000540017 KIR2DL5BQ8NHK3 375 aa13.47□□□□□ -0.25
SNRPA1-203ENST00000540017 GGACTQ9BVM4 153 aa13.47□□□□□ -0.25
SNRPA1-203ENST00000540017 NRN1Q9NPD7 142 aa13.47□□□□□ -0.25
SNRPA1-203ENST00000540017 LYRM2Q9NU23 88 aaPredicted RBP13.47□□□□□ -0.25
SNRPA1-203ENST00000540017 DOK5Q9P104 306 aa13.47□□□□□ -0.25
SNRPA1-203ENST00000540017 PVALBP20472 110 aaPredicted RBP13.46□□□□□ -0.25
SNRPA1-203ENST00000540017 NUP62P37198 522 aaPredicted RBP13.46□□□□□ -0.25
SNRPA1-203ENST00000540017 C1orf194Q5T5A4 169 aa13.46□□□□□ -0.25
SNRPA1-203ENST00000540017 TEPPQ6URK8 271 aa13.46□□□□□ -0.25
SNRPA1-203ENST00000540017 TMEM252Q8N6L7 170 aa13.46□□□□□ -0.25
SNRPA1-203ENST00000540017 TMEM217Q8N7C4 229 aa13.46□□□□□ -0.25
SNRPA1-203ENST00000540017 OR1B1Q8NGR6 318 aa13.46□□□□□ -0.25
SNRPA1-203ENST00000540017 PPP1R14BQ96C90 147 aa13.46□□□□□ -0.25
SNRPA1-203ENST00000540017 NMES1Q9C002 83 aa13.46□□□□□ -0.25
SNRPA1-203ENST00000540017 PFDN2Q9UHV9 154 aa13.46□□□□□ -0.25
SNRPA1-203ENST00000540017 ZNF98A6NK75 572 aa13.45□□□□□ -0.26
SNRPA1-203ENST00000540017 KNCNA6PVL3 124 aa13.45□□□□□ -0.26
SNRPA1-203ENST00000540017 H0YIZ8 118 aa13.45□□□□□ -0.26
SNRPA1-203ENST00000540017 LINC00869P0C866 280 aa13.45□□□□□ -0.26
SNRPA1-203ENST00000540017 DEFB135Q30KP9 77 aa13.45□□□□□ -0.26
SNRPA1-203ENST00000540017 C17orf77Q96MU5 243 aa13.45□□□□□ -0.26
SNRPA1-203ENST00000540017 SLC45A2Q9UMX9 530 aa13.45□□□□□ -0.26
SNRPA1-203ENST00000540017 UBE2CO00762 179 aa13.44□□□□□ -0.26
SNRPA1-203ENST00000540017 AGPAT2O15120 278 aa13.44□□□□□ -0.26
SNRPA1-203ENST00000540017 SSNA1O43805 119 aa13.44□□□□□ -0.26
SNRPA1-203ENST00000540017 SULT1A1P50225 295 aa13.44□□□□□ -0.26
SNRPA1-203ENST00000540017 PLP1P60201 277 aa13.44□□□□□ -0.26
SNRPA1-203ENST00000540017 LRRC37A5PQ49AS3 106 aa13.44□□□□□ -0.26
SNRPA1-203ENST00000540017 PSMG4Q5JS54 123 aa13.44□□□□□ -0.26
SNRPA1-203ENST00000540017 PATE2Q6UY27 113 aa13.44□□□□□ -0.26
SNRPA1-203ENST00000540017 Q6ZWC4 215 aa13.44□□□□□ -0.26
SNRPA1-203ENST00000540017 OR8I2Q8N0Y5 310 aa13.44□□□□□ -0.26
SNRPA1-203ENST00000540017 MUC7Q8TAX7 377 aa13.44□□□□□ -0.26
SNRPA1-203ENST00000540017 MGST2Q99735 147 aa13.44□□□□□ -0.26
SNRPA1-203ENST00000540017 TMEM147Q9BVK8 224 aa13.44□□□□□ -0.26
SNRPA1-203ENST00000540017 SCRT1Q9BWW7 348 aa13.44□□□□□ -0.26
SNRPA1-203ENST00000540017 CSTL1Q9H114 145 aa13.44□□□□□ -0.26
SNRPA1-203ENST00000540017 SLC25A32Q9H2D1 315 aa13.44□□□□□ -0.26
SNRPA1-203ENST00000540017 SLC25A22Q9H936 323 aa13.44□□□□□ -0.26
SNRPA1-203ENST00000540017 OR5AC2Q9NZP5 309 aa13.44□□□□□ -0.26
SNRPA1-203ENST00000540017 FBXL17Q9UF56 701 aa13.44□□□□□ -0.26
SNRPA1-203ENST00000540017 AGRNO00468 2067 aa13.44□□□□□ -0.26
SNRPA1-203ENST00000540017 SOCS3O14543 225 aa13.43□□□□□ -0.26
SNRPA1-203ENST00000540017 SELENOTP62341 195 aa13.43□□□□□ -0.26
SNRPA1-203ENST00000540017 H3BRN7 92 aa13.42□□□□□ -0.26
SNRPA1-203ENST00000540017 SPRY2O43597 315 aa13.42□□□□□ -0.26
SNRPA1-203ENST00000540017 PTTG1O95997 202 aa13.42□□□□□ -0.26
SNRPA1-203ENST00000540017 VWC2Q2TAL6 325 aa13.42□□□□□ -0.26
SNRPA1-203ENST00000540017 TRPT1Q86TN4 253 aaKnown RBP13.42□□□□□ -0.26
SNRPA1-203ENST00000540017 STHQ8IWL8 128 aa13.42□□□□□ -0.26
SNRPA1-203ENST00000540017 RNF183Q96D59 192 aa13.42□□□□□ -0.26
SNRPA1-203ENST00000540017 UHRF2Q96PU4 802 aa13.42□□□□□ -0.26
SNRPA1-203ENST00000540017 SLC25A39Q9BZJ4 359 aaPredicted RBP13.42□□□□□ -0.26
SNRPA1-203ENST00000540017 HIGD1AQ9Y241 93 aa13.42□□□□□ -0.26
SNRPA1-203ENST00000540017 ALG5Q9Y673 324 aa13.42□□□□□ -0.26
SNRPA1-203ENST00000540017 HYPMO75409 117 aa13.41□□□□□ -0.26
SNRPA1-203ENST00000540017 OR5G3P0C626 314 aa13.41□□□□□ -0.26
SNRPA1-203ENST00000540017 S100A11P31949 105 aa13.41□□□□□ -0.26
SNRPA1-203ENST00000540017 DEFB1P60022 68 aa13.41□□□□□ -0.26
SNRPA1-203ENST00000540017 SNRPD3P62318 126 aaKnown RBP13.41□□□□□ -0.26
SNRPA1-203ENST00000540017 CYCSP99999 105 aaKnown RBP13.41□□□□□ -0.26
SNRPA1-203ENST00000540017 NHLH2Q02577 135 aa13.41□□□□□ -0.26
SNRPA1-203ENST00000540017 ACTL10Q5JWF8 245 aa13.41□□□□□ -0.26
SNRPA1-203ENST00000540017 PPP1R1CQ8WVI7 109 aa13.41□□□□□ -0.26
SNRPA1-203ENST00000540017 SHANK2-AS3Q9BTD1 123 aa13.41□□□□□ -0.26
SNRPA1-203ENST00000540017 RNF126Q9BV68 326 aa13.41□□□□□ -0.26
SNRPA1-203ENST00000540017 ARL6Q9H0F7 186 aa13.41□□□□□ -0.26
SNRPA1-203ENST00000540017 SEPSECSQ9HD40 501 aaKnown RBP13.41□□□□□ -0.26
SNRPA1-203ENST00000540017 UQCC1Q9NVA1 299 aa13.41□□□□□ -0.26
SNRPA1-203ENST00000540017 WDR83OSQ9Y284 106 aa13.41□□□□□ -0.26
SNRPA1-203ENST00000540017 TP53TG1Q9Y2A0 90 aa13.41□□□□□ -0.26
SNRPA1-203ENST00000540017 RLN2P04090 185 aa13.4□□□□□ -0.26
SNRPA1-203ENST00000540017 GIG44P09565 113 aaPredicted RBP13.4□□□□□ -0.26
SNRPA1-203ENST00000540017 RAP2BP61225 183 aa13.4□□□□□ -0.26
SNRPA1-203ENST00000540017 ZNF546Q86UE3 836 aa13.4□□□□□ -0.26
SNRPA1-203ENST00000540017 STX12Q86Y82 276 aa13.4□□□□□ -0.26
SNRPA1-203ENST00000540017 RSG1Q9BU20 258 aa13.4□□□□□ -0.26
SNRPA1-203ENST00000540017 KMT2CQ8NEZ4 4911 aaKnown RBP13.4□□□□□ -0.26
SNRPA1-203ENST00000540017 UBE2L5PA0A1B0GUS4 154 aa13.39□□□□□ -0.27
SNRPA1-203ENST00000540017 E5RGE8 158 aa13.39□□□□□ -0.27
SNRPA1-203ENST00000540017 C3orf84H3BNL1 204 aa13.39□□□□□ -0.27
SNRPA1-203ENST00000540017 CA1P00915 261 aaPredicted RBP13.39□□□□□ -0.27
SNRPA1-203ENST00000540017 GALR1P47211 349 aa13.39□□□□□ -0.27
SNRPA1-203ENST00000540017 EWSR1Q01844 656 aaKnown RBP eCLIP13.39□□□□□ -0.27
SNRPA1-203ENST00000540017 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.39□□□□□ -0.27
SNRPA1-203ENST00000540017 MPC2O95563 127 aa13.38□□□□□ -0.27
SNRPA1-203ENST00000540017 CXCL3P19876 107 aa13.38□□□□□ -0.27
SNRPA1-203ENST00000540017 CAMLGP49069 296 aa13.38□□□□□ -0.27
SNRPA1-203ENST00000540017 HBG1P69891 147 aa13.38□□□□□ -0.27
SNRPA1-203ENST00000540017 HBG2P69892 147 aa13.38□□□□□ -0.27
SNRPA1-203ENST00000540017 CASC10Q5T4H9 136 aa13.38□□□□□ -0.27
SNRPA1-203ENST00000540017 GDF5OSQ5U4N7 250 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms