RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 MIC13Q5XKP0 118 aa13.34□□□□□ -0.27
COPS3-212ENST00000539941 LEMD1Q68G75 181 aa13.34□□□□□ -0.27
COPS3-212ENST00000539941 TTC9CQ8N5M4 171 aa13.34□□□□□ -0.27
COPS3-212ENST00000539941 STPG3Q8N7X2 389 aa13.34□□□□□ -0.27
COPS3-212ENST00000539941 THAP8Q8NA92 274 aa13.34□□□□□ -0.27
COPS3-212ENST00000539941 OR2D3Q8NGH3 330 aa13.34□□□□□ -0.27
COPS3-212ENST00000539941 ANAPC16Q96DE5 110 aa13.34□□□□□ -0.27
COPS3-212ENST00000539941 FOXC2Q99958 501 aa13.34□□□□□ -0.27
COPS3-212ENST00000539941 SLC25A33Q9BSK2 321 aa13.34□□□□□ -0.27
COPS3-212ENST00000539941 WNT10AQ9GZT5 417 aa13.34□□□□□ -0.27
COPS3-212ENST00000539941 SLC39A9Q9NUM3 307 aa13.34□□□□□ -0.27
COPS3-212ENST00000539941 IGKV1OR2-108A0A075B7D4 117 aa13.34□□□□□ -0.27
COPS3-212ENST00000539941 MAP1LC3B2A6NCE7 125 aa13.34□□□□□ -0.27
COPS3-212ENST00000539941 K7EP13 123 aa13.34□□□□□ -0.27
COPS3-212ENST00000539941 DEFA4P12838 97 aa13.34□□□□□ -0.27
COPS3-212ENST00000539941 NDPQ00604 133 aa13.34□□□□□ -0.27
COPS3-212ENST00000539941 C5orf56Q8N8D9 126 aa13.34□□□□□ -0.27
COPS3-212ENST00000539941 OR2T6Q8NHC8 308 aa13.34□□□□□ -0.27
COPS3-212ENST00000539941 MAP1LC3BQ9GZQ8 125 aa13.34□□□□□ -0.27
COPS3-212ENST00000539941 A0A1B0GV50 99 aa13.33□□□□□ -0.28
COPS3-212ENST00000539941 FSHBP01225 129 aa13.33□□□□□ -0.28
COPS3-212ENST00000539941 SELENOTP62341 195 aa13.33□□□□□ -0.28
COPS3-212ENST00000539941 TMEM116Q8NCL8 245 aa13.33□□□□□ -0.28
COPS3-212ENST00000539941 ORAOV1Q8WV07 137 aa13.33□□□□□ -0.28
COPS3-212ENST00000539941 FAM103A1Q9BTL3 118 aaKnown RBP13.33□□□□□ -0.28
COPS3-212ENST00000539941 C20orf202A1L168 122 aa13.32□□□□□ -0.28
COPS3-212ENST00000539941 CDC34P49427 236 aaPredicted RBP13.32□□□□□ -0.28
COPS3-212ENST00000539941 PAFAH1B2P68402 229 aa13.32□□□□□ -0.28
COPS3-212ENST00000539941 ASPHD1Q5U4P2 390 aa13.32□□□□□ -0.28
COPS3-212ENST00000539941 LCN15Q6UWW0 184 aa13.32□□□□□ -0.28
COPS3-212ENST00000539941 CYP2G1PQ6ZSU1 146 aa13.32□□□□□ -0.28
COPS3-212ENST00000539941 C16orf82Q7Z2V1 217 aa13.32□□□□□ -0.28
COPS3-212ENST00000539941 SMIM15Q7Z3B0 74 aa13.32□□□□□ -0.28
COPS3-212ENST00000539941 SGMS2Q8NHU3 365 aa13.32□□□□□ -0.28
COPS3-212ENST00000539941 NPIPB3Q92617 1050 aa13.32□□□□□ -0.28
COPS3-212ENST00000539941 ZFHX3Q15911 3703 aa13.32□□□□□ -0.28
COPS3-212ENST00000539941 A6NDX4 124 aa13.31□□□□□ -0.28
COPS3-212ENST00000539941 H7BYZ3 331 aa13.31□□□□□ -0.28
COPS3-212ENST00000539941 I3L2K1 104 aa13.31□□□□□ -0.28
COPS3-212ENST00000539941 MT-CO2P00403 227 aa13.31□□□□□ -0.28
COPS3-212ENST00000539941 LINC00869P0C866 280 aa13.31□□□□□ -0.28
COPS3-212ENST00000539941 CNN1P51911 297 aaKnown RBP13.31□□□□□ -0.28
COPS3-212ENST00000539941 RBX1P62877 108 aa13.31□□□□□ -0.28
COPS3-212ENST00000539941 KCNIP4Q6PIL6 250 aa13.31□□□□□ -0.28
COPS3-212ENST00000539941 C19orf35Q6ZS72 473 aa13.31□□□□□ -0.28
COPS3-212ENST00000539941 C9orf139Q6ZV77 190 aa13.31□□□□□ -0.28
COPS3-212ENST00000539941 C19orf24Q9BVV8 132 aa13.31□□□□□ -0.28
COPS3-212ENST00000539941 SLC25A22Q9H936 323 aa13.31□□□□□ -0.28
COPS3-212ENST00000539941 MTORP42345 2549 aa13.31□□□□□ -0.28
COPS3-212ENST00000539941 A0A1W2PPV4 95 aa13.31□□□□□ -0.28
COPS3-212ENST00000539941 TCRBV4S1A1TA0A5B7 111 aa13.31□□□□□ -0.28
COPS3-212ENST00000539941 EGR2P11161 476 aaPredicted RBP13.31□□□□□ -0.28
COPS3-212ENST00000539941 GALR1P47211 349 aa13.31□□□□□ -0.28
COPS3-212ENST00000539941 TEX43Q6ZNM6 134 aa13.31□□□□□ -0.28
COPS3-212ENST00000539941 WFDC11Q8NEX6 87 aa13.31□□□□□ -0.28
COPS3-212ENST00000539941 OR51G1Q8NGK1 321 aa13.31□□□□□ -0.28
COPS3-212ENST00000539941 TRGV9Q99603 122 aa13.31□□□□□ -0.28
COPS3-212ENST00000539941 HSPB9Q9BQS6 159 aa13.31□□□□□ -0.28
COPS3-212ENST00000539941 TMUB1Q9BVT8 246 aa13.31□□□□□ -0.28
COPS3-212ENST00000539941 H3BUX3 64 aa13.3□□□□□ -0.28
COPS3-212ENST00000539941 OR5I1Q13606 314 aa13.3□□□□□ -0.28
COPS3-212ENST00000539941 TEX29Q8N6K0 151 aa13.3□□□□□ -0.28
COPS3-212ENST00000539941 MS4A10Q96PG2 267 aa13.3□□□□□ -0.28
COPS3-212ENST00000539941 DNAJC4Q9NNZ3 241 aa13.3□□□□□ -0.28
COPS3-212ENST00000539941 MRPL36Q9P0J6 103 aaKnown RBP13.3□□□□□ -0.28
COPS3-212ENST00000539941 IGLV11-55A0A075B6I3 123 aa13.29□□□□□ -0.28
COPS3-212ENST00000539941 IGKV1D-37A0A075B6S9 117 aa13.29□□□□□ -0.28
COPS3-212ENST00000539941 ZFP92A6NM28 416 aa13.29□□□□□ -0.28
COPS3-212ENST00000539941 ZNF705FA8MVS1 300 aaPredicted RBP13.29□□□□□ -0.28
COPS3-212ENST00000539941 TCF21O43680 179 aa13.29□□□□□ -0.28
COPS3-212ENST00000539941 ZNF705DP0CH99 300 aaPredicted RBP13.29□□□□□ -0.28
COPS3-212ENST00000539941 ZNF705BP0CI00 300 aaPredicted RBP13.29□□□□□ -0.28
COPS3-212ENST00000539941 RHOBP62745 196 aa13.29□□□□□ -0.28
COPS3-212ENST00000539941 KLK9Q2XQG4 91 aa13.29□□□□□ -0.28
COPS3-212ENST00000539941 GCSAMLQ5JQS6 135 aa13.29□□□□□ -0.28
COPS3-212ENST00000539941 TMEM219Q86XT9 240 aa13.29□□□□□ -0.28
COPS3-212ENST00000539941 FAM110DQ8TAY7 271 aaPredicted RBP13.29□□□□□ -0.28
COPS3-212ENST00000539941 AURKAIP1Q9NWT8 199 aaPredicted RBP13.29□□□□□ -0.28
COPS3-212ENST00000539941 THYN1Q9P016 225 aa13.29□□□□□ -0.28
COPS3-212ENST00000539941 GNG13Q9P2W3 67 aa13.29□□□□□ -0.28
COPS3-212ENST00000539941 KLK9Q9UKQ9 250 aa13.29□□□□□ -0.28
COPS3-212ENST00000539941 SETD2Q9BYW2 2564 aaPredicted RBP13.29□□□□□ -0.28
COPS3-212ENST00000539941 K7EIM0 57 aa13.28□□□□□ -0.28
COPS3-212ENST00000539941 FGF8P55075 233 aaPredicted RBP13.28□□□□□ -0.28
COPS3-212ENST00000539941 FANCD2OSQ96PS1 177 aa13.28□□□□□ -0.28
COPS3-212ENST00000539941 CHTOPQ9Y3Y2 248 aaKnown RBP13.28□□□□□ -0.28
COPS3-212ENST00000539941 SOX21Q9Y651 276 aaPredicted RBP13.28□□□□□ -0.28
COPS3-212ENST00000539941 TMEM250H0YL14 139 aa13.28□□□□□ -0.28
COPS3-212ENST00000539941 ATP6V0E1O15342 81 aa13.28□□□□□ -0.28
COPS3-212ENST00000539941 AMY1AP04745 511 aa13.28□□□□□ -0.28
COPS3-212ENST00000539941 CRIP2P52943 208 aaPredicted RBP13.28□□□□□ -0.28
COPS3-212ENST00000539941 RPS20P60866 119 aaKnown RBP13.28□□□□□ -0.28
COPS3-212ENST00000539941 SVIPQ8NHG7 77 aa13.28□□□□□ -0.28
COPS3-212ENST00000539941 RNF2Q99496 336 aa13.28□□□□□ -0.28
COPS3-212ENST00000539941 TNFRSF19Q9NS68 423 aa13.28□□□□□ -0.28
COPS3-212ENST00000539941 ACANP16112 2415 aa13.28□□□□□ -0.28
COPS3-212ENST00000539941 IGHV3-48P01763 117 aa13.27□□□□□ -0.29
COPS3-212ENST00000539941 HNF1AP20823 631 aa13.27□□□□□ -0.29
COPS3-212ENST00000539941 TPPP2P59282 170 aa13.27□□□□□ -0.29
COPS3-212ENST00000539941 DEFB112Q30KQ8 113 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms