RNA–Protein interactions for RNA: ENST00000539921.5

SNHG1-211, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 1,071 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-211ENST00000539921 C17orf99Q6UX52 265 aa4.94□□□□□ -1.62
SNHG1-211ENST00000539921 FAM214BQ7L5A3 538 aa4.94□□□□□ -1.62
SNHG1-211ENST00000539921 STPG3Q8N7X2 389 aa4.94□□□□□ -1.62
SNHG1-211ENST00000539921 PRSS3P2Q8NHM4 247 aa4.94□□□□□ -1.62
SNHG1-211ENST00000539921 ELSPBP1Q96BH3 223 aa4.94□□□□□ -1.62
SNHG1-211ENST00000539921 FMC1Q96HJ9 113 aa4.94□□□□□ -1.62
SNHG1-211ENST00000539921 PRORYQ9H606 182 aa4.94□□□□□ -1.62
SNHG1-211ENST00000539921 PHPT1Q9NRX4 125 aaPredicted RBP4.94□□□□□ -1.62
SNHG1-211ENST00000539921 C21orf62Q9NYP8 219 aa4.94□□□□□ -1.62
SNHG1-211ENST00000539921 HHLA3Q9XRX5 114 aa4.94□□□□□ -1.62
SNHG1-211ENST00000539921 AMMECR1Q9Y4X0 333 aaPredicted RBP4.94□□□□□ -1.62
SNHG1-211ENST00000539921 CHCHD2Q9Y6H1 151 aaPredicted RBP4.94□□□□□ -1.62
SNHG1-211ENST00000539921 POLR2AP24928 1970 aaKnown RBP4.94□□□□□ -1.62
SNHG1-211ENST00000539921 SCN10AQ9Y5Y9 1956 aa4.94□□□□□ -1.62
SNHG1-211ENST00000539921 MED12LQ86YW9 2145 aa4.94□□□□□ -1.62
SNHG1-211ENST00000539921 COL5A1P20908 1838 aaPredicted RBP4.93□□□□□ -1.62
SNHG1-211ENST00000539921 IGHV3OR15-7A0A075B7D8 119 aa4.93□□□□□ -1.62
SNHG1-211ENST00000539921 A0A1B0GUT8 65 aa4.93□□□□□ -1.62
SNHG1-211ENST00000539921 NDUFC2-KCTD14E9PQ53 114 aa4.93□□□□□ -1.62
SNHG1-211ENST00000539921 PRRG2O14669 202 aa4.93□□□□□ -1.62
SNHG1-211ENST00000539921 OVOL1O14753 267 aa4.93□□□□□ -1.62
SNHG1-211ENST00000539921 P01737 135 aa4.93□□□□□ -1.62
SNHG1-211ENST00000539921 IGKCP01834 107 aa4.93□□□□□ -1.62
SNHG1-211ENST00000539921 P0DMU3 169 aa4.93□□□□□ -1.62
SNHG1-211ENST00000539921 FAM231AP0DMU4 169 aa4.93□□□□□ -1.62
SNHG1-211ENST00000539921 FAM231CP0DMU5 169 aa4.93□□□□□ -1.62
SNHG1-211ENST00000539921 PLNP26678 52 aa4.93□□□□□ -1.62
SNHG1-211ENST00000539921 CD27P26842 260 aa4.93□□□□□ -1.62
SNHG1-211ENST00000539921 CAMPP49913 170 aa4.93□□□□□ -1.62
SNHG1-211ENST00000539921 CCL11P51671 97 aa4.93□□□□□ -1.62
SNHG1-211ENST00000539921 HERVK_113P63121 156 aa4.93□□□□□ -1.62
SNHG1-211ENST00000539921 OR1C1Q15619 314 aa4.93□□□□□ -1.62
SNHG1-211ENST00000539921 TMEM170BQ5T4T1 132 aa4.93□□□□□ -1.62
SNHG1-211ENST00000539921 MIC13Q5XKP0 118 aa4.93□□□□□ -1.62
SNHG1-211ENST00000539921 RSPO2Q6UXX9 243 aaPredicted RBP4.93□□□□□ -1.62
SNHG1-211ENST00000539921 MKXQ8IYA7 352 aa4.93□□□□□ -1.62
SNHG1-211ENST00000539921 DRAM1Q8N682 238 aa4.93□□□□□ -1.62
SNHG1-211ENST00000539921 ANKRD29Q8N6D5 301 aa4.93□□□□□ -1.62
SNHG1-211ENST00000539921 TIMD4Q96H15 378 aa4.93□□□□□ -1.62
SNHG1-211ENST00000539921 ZNF714Q96N38 554 aa4.93□□□□□ -1.62
SNHG1-211ENST00000539921 MDFIQ99750 246 aa4.93□□□□□ -1.62
SNHG1-211ENST00000539921 ASCL2Q99929 193 aa4.93□□□□□ -1.62
SNHG1-211ENST00000539921 MRPL20Q9BYC9 149 aaKnown RBP4.93□□□□□ -1.62
SNHG1-211ENST00000539921 SPRY4Q9C004 299 aa4.93□□□□□ -1.62
SNHG1-211ENST00000539921 RNF181Q9P0P0 153 aa4.93□□□□□ -1.62
SNHG1-211ENST00000539921 FZR1Q9UM11 496 aa4.93□□□□□ -1.62
SNHG1-211ENST00000539921 PCSK5Q92824 1860 aa4.92□□□□□ -1.62
SNHG1-211ENST00000539921 NCOA6Q14686 2063 aaPredicted RBP4.92□□□□□ -1.62
SNHG1-211ENST00000539921 TRAV2A0A0B4J234 112 aa4.92□□□□□ -1.62
SNHG1-211ENST00000539921 TRAV8-4A0A0B4J246 113 aa4.92□□□□□ -1.62
SNHG1-211ENST00000539921 TRAV24A0A0B4J272 114 aa4.92□□□□□ -1.62
SNHG1-211ENST00000539921 NCBP2LA6PVI3 153 aaKnown RBP4.92□□□□□ -1.62
SNHG1-211ENST00000539921 H0YGG7 62 aa4.92□□□□□ -1.62
SNHG1-211ENST00000539921 H3BML4 177 aa4.92□□□□□ -1.62
SNHG1-211ENST00000539921 SPRY1O43609 319 aaPredicted RBP4.92□□□□□ -1.62
SNHG1-211ENST00000539921 LTAP01374 205 aa4.92□□□□□ -1.62
SNHG1-211ENST00000539921 COL8A2P25067 703 aa4.92□□□□□ -1.62
SNHG1-211ENST00000539921 CD52P31358 61 aa4.92□□□□□ -1.62
SNHG1-211ENST00000539921 DUTP33316 252 aaKnown RBP4.92□□□□□ -1.62
SNHG1-211ENST00000539921 MYCNOSP40205 109 aa4.92□□□□□ -1.62
SNHG1-211ENST00000539921 PLGLB1Q02325 96 aa4.92□□□□□ -1.62
SNHG1-211ENST00000539921 EBI3Q14213 229 aa4.92□□□□□ -1.62
SNHG1-211ENST00000539921 ZNF542PQ5EBM4 170 aa4.92□□□□□ -1.62
SNHG1-211ENST00000539921 Q6ZR03 302 aa4.92□□□□□ -1.62
SNHG1-211ENST00000539921 C10orf126Q8N4M7 172 aa4.92□□□□□ -1.62
SNHG1-211ENST00000539921 C8orf31Q8N9H6 132 aa4.92□□□□□ -1.62
SNHG1-211ENST00000539921 OR1L8Q8NGR8 309 aa4.92□□□□□ -1.62
SNHG1-211ENST00000539921 FAM57AQ8TBR7 257 aa4.92□□□□□ -1.62
SNHG1-211ENST00000539921 RNF138Q8WVD3 245 aa4.92□□□□□ -1.62
SNHG1-211ENST00000539921 IGFBPL1Q8WX77 278 aa4.92□□□□□ -1.62
SNHG1-211ENST00000539921 FAM168AQ92567 244 aa4.92□□□□□ -1.62
SNHG1-211ENST00000539921 TSACCQ96A04 125 aaPredicted RBP4.92□□□□□ -1.62
SNHG1-211ENST00000539921 ODF3Q96PU9 254 aa4.92□□□□□ -1.62
SNHG1-211ENST00000539921 HIST1H4GQ99525 98 aa4.92□□□□□ -1.62
SNHG1-211ENST00000539921 WNT6Q9Y6F9 365 aa4.92□□□□□ -1.62
SNHG1-211ENST00000539921 ARHGAP21Q5T5U3 1957 aa4.92□□□□□ -1.62
SNHG1-211ENST00000539921 IGLV3-32A0A0A0MS00 114 aa4.91□□□□□ -1.62
SNHG1-211ENST00000539921 TRAV8-2A0A0B4J237 113 aa4.91□□□□□ -1.62
SNHG1-211ENST00000539921 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.91□□□□□ -1.62
SNHG1-211ENST00000539921 A0A1W2PR77 199 aa4.91□□□□□ -1.62
SNHG1-211ENST00000539921 WI2-2373I1.2A0A1W2PRP0 233 aa4.91□□□□□ -1.62
SNHG1-211ENST00000539921 C16orf97H3BN30 126 aa4.91□□□□□ -1.62
SNHG1-211ENST00000539921 H3BT86 120 aa4.91□□□□□ -1.62
SNHG1-211ENST00000539921 STATHP02808 62 aa4.91□□□□□ -1.62
SNHG1-211ENST00000539921 IGKV3-11P04433 115 aa4.91□□□□□ -1.62
SNHG1-211ENST00000539921 IGLC6P0CF74 106 aa4.91□□□□□ -1.62
SNHG1-211ENST00000539921 COX7CP15954 63 aa4.91□□□□□ -1.62
SNHG1-211ENST00000539921 IZUMO4Q1ZYL8 232 aa4.91□□□□□ -1.62
SNHG1-211ENST00000539921 FAM27BQ5VT28 67 aa4.91□□□□□ -1.62
SNHG1-211ENST00000539921 TXNDC8Q6A555 127 aa4.91□□□□□ -1.62
SNHG1-211ENST00000539921 C1orf229Q6ZS94 237 aaPredicted RBP4.91□□□□□ -1.62
SNHG1-211ENST00000539921 TMEFF1Q8IYR6 380 aa4.91□□□□□ -1.62
SNHG1-211ENST00000539921 ORMDL3Q8N138 153 aa4.91□□□□□ -1.62
SNHG1-211ENST00000539921 OR8A1Q8NGG7 326 aa4.91□□□□□ -1.62
SNHG1-211ENST00000539921 MAFAQ8NHW3 353 aaPredicted RBP4.91□□□□□ -1.62
SNHG1-211ENST00000539921 RFESDQ8TAC1 157 aa4.91□□□□□ -1.62
SNHG1-211ENST00000539921 ZNF524Q96C55 264 aa4.91□□□□□ -1.62
SNHG1-211ENST00000539921 ZNF503Q96F45 646 aa4.91□□□□□ -1.62
SNHG1-211ENST00000539921 NABP2Q9BQ15 211 aa4.91□□□□□ -1.62
SNHG1-211ENST00000539921 SLC25A39Q9BZJ4 359 aaPredicted RBP4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms