RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 CEBPGP53567 150 aa11.95□□□□□ -0.5
DDB1-216ENST00000539739 RPS20P60866 119 aaKnown RBP11.95□□□□□ -0.5
DDB1-216ENST00000539739 AKR1C1Q04828 323 aa11.95□□□□□ -0.5
DDB1-216ENST00000539739 DMRTA1Q5VZB9 504 aa11.95□□□□□ -0.5
DDB1-216ENST00000539739 CDPF1Q6NVV7 123 aa11.95□□□□□ -0.5
DDB1-216ENST00000539739 ZNF343Q6P1L6 599 aa11.95□□□□□ -0.5
DDB1-216ENST00000539739 OR10P1Q8NGE3 313 aa11.95□□□□□ -0.5
DDB1-216ENST00000539739 PACRGQ96M98 296 aaPredicted RBP11.95□□□□□ -0.5
DDB1-216ENST00000539739 SLC25A31Q9H0C2 315 aa11.95□□□□□ -0.5
DDB1-216ENST00000539739 ZFP30Q9Y2G7 519 aa11.95□□□□□ -0.5
DDB1-216ENST00000539739 SNRPCP09234 159 aaKnown RBP11.94□□□□□ -0.5
DDB1-216ENST00000539739 MFAP4P55083 255 aa11.94□□□□□ -0.5
DDB1-216ENST00000539739 CD69Q07108 199 aa11.94□□□□□ -0.5
DDB1-216ENST00000539739 OR8G2PQ6IF36 304 aa11.94□□□□□ -0.5
DDB1-216ENST00000539739 ACSM6Q6P461 480 aa11.94□□□□□ -0.5
DDB1-216ENST00000539739 ZNF664Q8N3J9 261 aa11.94□□□□□ -0.5
DDB1-216ENST00000539739 TMEM252Q8N6L7 170 aa11.94□□□□□ -0.5
DDB1-216ENST00000539739 CACNG8Q8WXS5 425 aa11.94□□□□□ -0.5
DDB1-216ENST00000539739 DCUN1D4Q92564 292 aa11.94□□□□□ -0.5
DDB1-216ENST00000539739 FNDC4Q9H6D8 234 aaPredicted RBP11.94□□□□□ -0.5
DDB1-216ENST00000539739 S4R3C0 116 aa11.94□□□□□ -0.5
DDB1-216ENST00000539739 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.93□□□□□ -0.5
DDB1-216ENST00000539739 PHOX2AO14813 284 aa11.93□□□□□ -0.5
DDB1-216ENST00000539739 IGHV3-23P01764 117 aa11.93□□□□□ -0.5
DDB1-216ENST00000539739 LYL1P12980 280 aa11.93□□□□□ -0.5
DDB1-216ENST00000539739 SULT1A1P50225 295 aa11.93□□□□□ -0.5
DDB1-216ENST00000539739 SELENOTP62341 195 aa11.93□□□□□ -0.5
DDB1-216ENST00000539739 RUNX1Q01196 453 aa11.93□□□□□ -0.5
DDB1-216ENST00000539739 Q56UQ5 140 aa11.93□□□□□ -0.5
DDB1-216ENST00000539739 C18orf65Q6ZTR6 163 aa11.93□□□□□ -0.5
DDB1-216ENST00000539739 ZNF502Q8TBZ5 544 aa11.93□□□□□ -0.5
DDB1-216ENST00000539739 ATP6V0BQ99437 205 aa11.93□□□□□ -0.5
DDB1-216ENST00000539739 TXN2Q99757 166 aa11.93□□□□□ -0.5
DDB1-216ENST00000539739 ATG101Q9BSB4 218 aa11.93□□□□□ -0.5
DDB1-216ENST00000539739 PEF1Q9UBV8 284 aaKnown RBP11.93□□□□□ -0.5
DDB1-216ENST00000539739 IGHV3-48P01763 117 aa11.93□□□□□ -0.5
DDB1-216ENST00000539739 MLANAQ16655 118 aa11.93□□□□□ -0.5
DDB1-216ENST00000539739 TMEM241Q24JQ0 296 aa11.93□□□□□ -0.5
DDB1-216ENST00000539739 CLEC19AQ6UXS0 136 aa11.93□□□□□ -0.5
DDB1-216ENST00000539739 C8orf86Q6ZUL3 223 aa11.93□□□□□ -0.5
DDB1-216ENST00000539739 SSX7Q7RTT5 188 aa11.93□□□□□ -0.5
DDB1-216ENST00000539739 SLC35E1Q96K37 410 aa11.93□□□□□ -0.5
DDB1-216ENST00000539739 PUS1Q9Y606 427 aaKnown RBP eCLIP11.93□□□□□ -0.5
DDB1-216ENST00000539739 TENM1Q9UKZ4 2725 aa11.92□□□□□ -0.5
DDB1-216ENST00000539739 STAB1Q9NY15 2570 aa11.92□□□□□ -0.5
DDB1-216ENST00000539739 IGSF23A1L1A6 192 aa11.92□□□□□ -0.5
DDB1-216ENST00000539739 PMS2P5A8MQ11 134 aa11.92□□□□□ -0.5
DDB1-216ENST00000539739 ADARB2-AS1A8MUL3 147 aa11.92□□□□□ -0.5
DDB1-216ENST00000539739 SCGB2A1O75556 95 aa11.92□□□□□ -0.5
DDB1-216ENST00000539739 CST7O76096 145 aa11.92□□□□□ -0.5
DDB1-216ENST00000539739 HSPB1P04792 205 aaKnown RBP11.92□□□□□ -0.5
DDB1-216ENST00000539739 CLEC3BP05452 202 aa11.92□□□□□ -0.5
DDB1-216ENST00000539739 FCGR2BP31994 310 aaPredicted RBP11.92□□□□□ -0.5
DDB1-216ENST00000539739 HBG1P69891 147 aa11.92□□□□□ -0.5
DDB1-216ENST00000539739 HBG2P69892 147 aa11.92□□□□□ -0.5
DDB1-216ENST00000539739 FAM24BQ8N5W8 94 aa11.92□□□□□ -0.5
DDB1-216ENST00000539739 OR4X1Q8NH49 305 aa11.92□□□□□ -0.5
DDB1-216ENST00000539739 DPF1Q92782 380 aa11.92□□□□□ -0.5
DDB1-216ENST00000539739 RCC1LQ96I51 464 aaKnown RBP11.92□□□□□ -0.5
DDB1-216ENST00000539739 CCDC140Q96MF4 163 aa11.92□□□□□ -0.5
DDB1-216ENST00000539739 KIR2DL5BA0A0G2JN68 375 aa11.91□□□□□ -0.5
DDB1-216ENST00000539739 KIR2DL5BA0A0G2JPC4 375 aa11.91□□□□□ -0.5
DDB1-216ENST00000539739 TMEM238C9JI98 176 aa11.91□□□□□ -0.5
DDB1-216ENST00000539739 PRSS46E5RG02 174 aa11.91□□□□□ -0.5
DDB1-216ENST00000539739 GNG7O60262 68 aa11.91□□□□□ -0.5
DDB1-216ENST00000539739 RPL12P30050 165 aaKnown RBP11.91□□□□□ -0.5
DDB1-216ENST00000539739 GPR183P32249 361 aa11.91□□□□□ -0.5
DDB1-216ENST00000539739 RPS10P46783 165 aaKnown RBP11.91□□□□□ -0.5
DDB1-216ENST00000539739 SRSF3P84103 164 aaKnown RBP11.91□□□□□ -0.5
DDB1-216ENST00000539739 BAXQ07812 192 aa11.91□□□□□ -0.5
DDB1-216ENST00000539739 IQCJQ1A5X6 159 aa11.91□□□□□ -0.5
DDB1-216ENST00000539739 KIR2DL5AQ8N109 375 aa11.91□□□□□ -0.5
DDB1-216ENST00000539739 TMEM116Q8NCL8 245 aa11.91□□□□□ -0.5
DDB1-216ENST00000539739 OR11H1Q8NG94 326 aa11.91□□□□□ -0.5
DDB1-216ENST00000539739 OR4F17Q8NGA8 305 aa11.91□□□□□ -0.5
DDB1-216ENST00000539739 LYPD6BQ8NI32 183 aa11.91□□□□□ -0.5
DDB1-216ENST00000539739 OR4F4Q96R69 305 aa11.91□□□□□ -0.5
DDB1-216ENST00000539739 OR2T8A6NH00 312 aa11.9□□□□□ -0.5
DDB1-216ENST00000539739 GZMBP10144 247 aa11.9□□□□□ -0.5
DDB1-216ENST00000539739 ARL3P36405 182 aa11.9□□□□□ -0.5
DDB1-216ENST00000539739 RND2P52198 227 aa11.9□□□□□ -0.5
DDB1-216ENST00000539739 EWSR1Q01844 656 aaKnown RBP eCLIP11.9□□□□□ -0.5
DDB1-216ENST00000539739 SLC38A11Q08AI6 406 aa11.9□□□□□ -0.5
DDB1-216ENST00000539739 CLINT1Q14677 625 aa11.9□□□□□ -0.5
DDB1-216ENST00000539739 ATP6V1FQ16864 119 aa11.9□□□□□ -0.5
DDB1-216ENST00000539739 DEFB136Q30KP8 78 aa11.9□□□□□ -0.5
DDB1-216ENST00000539739 SPSB3Q6PJ21 355 aa11.9□□□□□ -0.5
DDB1-216ENST00000539739 BTNL8Q6UX41 500 aa11.9□□□□□ -0.5
DDB1-216ENST00000539739 TMEM217Q8N7C4 229 aa11.9□□□□□ -0.5
DDB1-216ENST00000539739 OR1N2Q8NGR9 330 aa11.9□□□□□ -0.5
DDB1-216ENST00000539739 ACY3Q96HD9 319 aa11.9□□□□□ -0.5
DDB1-216ENST00000539739 TRAV30A0A087WSZ9 112 aa11.89□□□□□ -0.51
DDB1-216ENST00000539739 LINC01619G3V211 115 aa11.89□□□□□ -0.51
DDB1-216ENST00000539739 M0QZ24 198 aa11.89□□□□□ -0.51
DDB1-216ENST00000539739 CCL24O00175 119 aa11.89□□□□□ -0.51
DDB1-216ENST00000539739 TAAR5O14804 337 aa11.89□□□□□ -0.51
DDB1-216ENST00000539739 HIST1H2BKO60814 126 aa11.89□□□□□ -0.51
DDB1-216ENST00000539739 OR2C1O95371 312 aa11.89□□□□□ -0.51
DDB1-216ENST00000539739 HIST1H2BJP06899 126 aa11.89□□□□□ -0.51
DDB1-216ENST00000539739 HIST1H2BOP23527 126 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 115.4 ms