RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 LRRC10Q5BKY1 277 aa7.73□□□□□ -1.17
CDH13-204ENST00000539548 HCP5Q6MZN7 132 aa7.73□□□□□ -1.17
CDH13-204ENST00000539548 UNQ5815/PRO19632Q6UWF5 114 aa7.73□□□□□ -1.17
CDH13-204ENST00000539548 LYPD2Q6UXB3 125 aa7.73□□□□□ -1.17
CDH13-204ENST00000539548 Q6ZS92 163 aa7.73□□□□□ -1.17
CDH13-204ENST00000539548 DAZAP1Q96EP5 407 aaKnown RBP7.73□□□□□ -1.17
CDH13-204ENST00000539548 PGLYRP4Q96LB8 373 aa7.73□□□□□ -1.17
CDH13-204ENST00000539548 Q9H3A6 140 aa7.73□□□□□ -1.17
CDH13-204ENST00000539548 RPH3ALQ9UNE2 315 aa7.73□□□□□ -1.17
CDH13-204ENST00000539548 LOC102724200A0A096LPH7 203 aaPredicted RBP7.73□□□□□ -1.17
CDH13-204ENST00000539548 IGHV1-24A0A0C4DH33 117 aa7.73□□□□□ -1.17
CDH13-204ENST00000539548 SPAARA0A1B0GVQ0 90 aa7.73□□□□□ -1.17
CDH13-204ENST00000539548 OR4C46A6NHA9 309 aa7.73□□□□□ -1.17
CDH13-204ENST00000539548 NPIPB6E9PJ23 425 aa7.73□□□□□ -1.17
CDH13-204ENST00000539548 CRYGBP07316 175 aa7.73□□□□□ -1.17
CDH13-204ENST00000539548 FAM87AP0C7U9 286 aa7.73□□□□□ -1.17
CDH13-204ENST00000539548 IGF2-ASQ6U949 168 aa7.73□□□□□ -1.17
CDH13-204ENST00000539548 DEFB124Q8NES8 71 aa7.73□□□□□ -1.17
CDH13-204ENST00000539548 OTORQ9NRC9 128 aa7.73□□□□□ -1.17
CDH13-204ENST00000539548 NCOR2Q9Y618 2525 aa7.72□□□□□ -1.17
CDH13-204ENST00000539548 CACNA1BQ00975 2339 aa7.72□□□□□ -1.17
CDH13-204ENST00000539548 SH2D7A6NKC9 451 aaPredicted RBP7.72□□□□□ -1.17
CDH13-204ENST00000539548 HAX1O00165 279 aa7.72□□□□□ -1.17
CDH13-204ENST00000539548 ENSAO43768 121 aaKnown RBP7.72□□□□□ -1.17
CDH13-204ENST00000539548 LEPROTL1O95214 131 aa7.72□□□□□ -1.17
CDH13-204ENST00000539548 RPL27AP46776 148 aaKnown RBP7.72□□□□□ -1.17
CDH13-204ENST00000539548 FOXA3P55318 350 aaPredicted RBP7.72□□□□□ -1.17
CDH13-204ENST00000539548 LEMD1Q68G75 181 aa7.72□□□□□ -1.17
CDH13-204ENST00000539548 LHFPL4Q7Z7J7 247 aa7.72□□□□□ -1.17
CDH13-204ENST00000539548 TMEM14CQ9P0S9 112 aa7.72□□□□□ -1.17
CDH13-204ENST00000539548 ZNF835Q9Y2P0 537 aa7.72□□□□□ -1.17
CDH13-204ENST00000539548 TRBV6-1A0A0K0K1D8 114 aa7.71□□□□□ -1.17
CDH13-204ENST00000539548 LOXP28300 417 aaPredicted RBP7.71□□□□□ -1.17
CDH13-204ENST00000539548 TMEM155Q4W5P6 130 aa7.71□□□□□ -1.17
CDH13-204ENST00000539548 C16orf54Q6UWD8 224 aa7.71□□□□□ -1.17
CDH13-204ENST00000539548 FAM57AQ8TBR7 257 aa7.71□□□□□ -1.17
CDH13-204ENST00000539548 KAAG1Q9UBP8 84 aa7.71□□□□□ -1.17
CDH13-204ENST00000539548 HIGD1AQ9Y241 93 aa7.71□□□□□ -1.17
CDH13-204ENST00000539548 CEP250Q9BV73 2442 aa7.71□□□□□ -1.17
CDH13-204ENST00000539548 PLXNB1O43157 2135 aa7.71□□□□□ -1.18
CDH13-204ENST00000539548 C16orf97H3BN30 126 aa7.71□□□□□ -1.18
CDH13-204ENST00000539548 M0QZ24 198 aa7.71□□□□□ -1.18
CDH13-204ENST00000539548 CHEK1O14757 476 aa7.71□□□□□ -1.18
CDH13-204ENST00000539548 LIPFP07098 398 aa7.71□□□□□ -1.18
CDH13-204ENST00000539548 IGHV1-8P0DP01 117 aa7.71□□□□□ -1.18
CDH13-204ENST00000539548 CD24P25063 80 aa7.71□□□□□ -1.18
CDH13-204ENST00000539548 PET117Q6UWS5 81 aa7.71□□□□□ -1.18
CDH13-204ENST00000539548 LINC00173Q6ZV60 143 aa7.71□□□□□ -1.18
CDH13-204ENST00000539548 Q6ZVH6 145 aa7.71□□□□□ -1.18
CDH13-204ENST00000539548 Q86TA4 180 aa7.71□□□□□ -1.18
CDH13-204ENST00000539548 WFDC8Q8IUA0 241 aa7.71□□□□□ -1.18
CDH13-204ENST00000539548 TMEM190Q8WZ59 177 aa7.71□□□□□ -1.18
CDH13-204ENST00000539548 CCL17Q92583 94 aa7.71□□□□□ -1.18
CDH13-204ENST00000539548 TMEM191AQ9H0A3 160 aa7.71□□□□□ -1.18
CDH13-204ENST00000539548 CTSZQ9UBR2 303 aa7.71□□□□□ -1.18
CDH13-204ENST00000539548 H3BTX0 84 aa7.7□□□□□ -1.18
CDH13-204ENST00000539548 K7EP13 123 aa7.7□□□□□ -1.18
CDH13-204ENST00000539548 IGLV2-11P01706 119 aa7.7□□□□□ -1.18
CDH13-204ENST00000539548 APOHP02749 345 aaPredicted RBP7.7□□□□□ -1.18
CDH13-204ENST00000539548 HOXB4P17483 251 aaPredicted RBP7.7□□□□□ -1.18
CDH13-204ENST00000539548 PRR31Q5SQ13 230 aa7.7□□□□□ -1.18
CDH13-204ENST00000539548 TMEM133Q9H2Q1 129 aa7.7□□□□□ -1.18
CDH13-204ENST00000539548 F11RQ9Y624 299 aaKnown RBP7.7□□□□□ -1.18
CDH13-204ENST00000539548 OTOGLQ3ZCN5 2332 aa7.7□□□□□ -1.18
CDH13-204ENST00000539548 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.7□□□□□ -1.18
CDH13-204ENST00000539548 IGHV3-72A0A0B4J1Y9 119 aa7.7□□□□□ -1.18
CDH13-204ENST00000539548 IGHV2-70DA0A0C4DH43 119 aa7.7□□□□□ -1.18
CDH13-204ENST00000539548 OVOL3O00110 214 aa7.7□□□□□ -1.18
CDH13-204ENST00000539548 COL8A1P27658 744 aa7.7□□□□□ -1.18
CDH13-204ENST00000539548 BSPH1Q075Z2 132 aa7.7□□□□□ -1.18
CDH13-204ENST00000539548 TNFRSF14Q92956 283 aa7.7□□□□□ -1.18
CDH13-204ENST00000539548 SIGLEC9Q9Y336 463 aa7.7□□□□□ -1.18
CDH13-204ENST00000539548 SPTBN2O15020 2390 aa7.69□□□□□ -1.18
CDH13-204ENST00000539548 IGHV3-21A0A0B4J1V1 117 aa7.69□□□□□ -1.18
CDH13-204ENST00000539548 PSG1P11464 419 aa7.69□□□□□ -1.18
CDH13-204ENST00000539548 FBLN7Q53RD9 439 aa7.69□□□□□ -1.18
CDH13-204ENST00000539548 SLC25A34Q6PIV7 304 aa7.69□□□□□ -1.18
CDH13-204ENST00000539548 CIARTQ8N365 385 aaPredicted RBP7.69□□□□□ -1.18
CDH13-204ENST00000539548 GATD1Q8NB37 220 aa7.69□□□□□ -1.18
CDH13-204ENST00000539548 MAP1LC3CQ9BXW4 147 aa7.69□□□□□ -1.18
CDH13-204ENST00000539548 SLC25A39Q9BZJ4 359 aaPredicted RBP7.69□□□□□ -1.18
CDH13-204ENST00000539548 GSX1Q9H4S2 264 aaPredicted RBP7.69□□□□□ -1.18
CDH13-204ENST00000539548 ACACBO00763 2458 aa7.69□□□□□ -1.18
CDH13-204ENST00000539548 hDV102S1A0JD36 115 aa7.69□□□□□ -1.18
CDH13-204ENST00000539548 VSTM5A8MXK1 200 aa7.69□□□□□ -1.18
CDH13-204ENST00000539548 TEX22C9J3V5 150 aa7.69□□□□□ -1.18
CDH13-204ENST00000539548 HSBP1L1C9JCN9 74 aa7.69□□□□□ -1.18
CDH13-204ENST00000539548 THBDP07204 575 aa7.69□□□□□ -1.18
CDH13-204ENST00000539548 IGLC1P0CG04 106 aa7.69□□□□□ -1.18
CDH13-204ENST00000539548 CNTFRP26992 372 aa7.69□□□□□ -1.18
CDH13-204ENST00000539548 RBPJQ06330 500 aa7.69□□□□□ -1.18
CDH13-204ENST00000539548 MPV17L2Q567V2 206 aa7.69□□□□□ -1.18
CDH13-204ENST00000539548 MS4A6AQ9H2W1 248 aa7.69□□□□□ -1.18
CDH13-204ENST00000539548 HSPB8Q9UJY1 196 aa7.69□□□□□ -1.18
CDH13-204ENST00000539548 RNF24Q9Y225 148 aa7.69□□□□□ -1.18
CDH13-204ENST00000539548 LOC105371242A0A075B767 164 aa7.68□□□□□ -1.18
CDH13-204ENST00000539548 TRAV8-1A0A0A6YYK1 113 aa7.68□□□□□ -1.18
CDH13-204ENST00000539548 A0A0G2JNJ9 132 aa7.68□□□□□ -1.18
CDH13-204ENST00000539548 ZNF785A8K8V0 405 aa7.68□□□□□ -1.18
CDH13-204ENST00000539548 I3L2K1 104 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms