RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 CENPWQ5EE01 88 aa11.04□□□□□ -0.64
ACTN1-205ENST00000538545 IGHV3OR16-13A0A075B7E8 117 aa11.04□□□□□ -0.64
ACTN1-205ENST00000538545 ELOA3CA0A087WX78 387 aaPredicted RBP11.04□□□□□ -0.64
ACTN1-205ENST00000538545 IGHV3-74A0A0B4J1X5 117 aa11.04□□□□□ -0.64
ACTN1-205ENST00000538545 FCGR2BP31994 310 aaPredicted RBP11.04□□□□□ -0.64
ACTN1-205ENST00000538545 RHOGP84095 191 aa11.04□□□□□ -0.64
ACTN1-205ENST00000538545 TMEM95Q3KNT9 176 aa11.04□□□□□ -0.64
ACTN1-205ENST00000538545 ZNF600Q6ZNG1 722 aa11.04□□□□□ -0.64
ACTN1-205ENST00000538545 C1QL4Q86Z23 238 aa11.04□□□□□ -0.64
ACTN1-205ENST00000538545 UNC79Q9P2D8 2635 aa11.03□□□□□ -0.64
ACTN1-205ENST00000538545 HELTA6NFD8 242 aa11.03□□□□□ -0.64
ACTN1-205ENST00000538545 B4DEV8 164 aa11.03□□□□□ -0.64
ACTN1-205ENST00000538545 ADMP35318 185 aa11.03□□□□□ -0.64
ACTN1-205ENST00000538545 GALR1P47211 349 aa11.03□□□□□ -0.64
ACTN1-205ENST00000538545 Q5PR19 223 aa11.03□□□□□ -0.64
ACTN1-205ENST00000538545 EXOC3-AS1Q8N2X6 119 aa11.03□□□□□ -0.64
ACTN1-205ENST00000538545 SRSF8Q9BRL6 282 aaKnown RBP11.03□□□□□ -0.64
ACTN1-205ENST00000538545 PGPA6NDG6 321 aa11.03□□□□□ -0.64
ACTN1-205ENST00000538545 TRGC2P03986 189 aa11.03□□□□□ -0.64
ACTN1-205ENST00000538545 NBEAP1P0C6P0 100 aa11.03□□□□□ -0.64
ACTN1-205ENST00000538545 GP9P14770 177 aa11.03□□□□□ -0.64
ACTN1-205ENST00000538545 SNRPEP62304 92 aaKnown RBP11.03□□□□□ -0.64
ACTN1-205ENST00000538545 RNF125Q96EQ8 232 aa11.03□□□□□ -0.64
ACTN1-205ENST00000538545 MFAP4P55083 255 aa11.02□□□□□ -0.65
ACTN1-205ENST00000538545 ZNF329Q86UD4 541 aa11.02□□□□□ -0.65
ACTN1-205ENST00000538545 Q96MF0 132 aa11.02□□□□□ -0.65
ACTN1-205ENST00000538545 RNASE7Q9H1E1 156 aaKnown RBP11.02□□□□□ -0.65
ACTN1-205ENST00000538545 ZNF586Q9NXT0 402 aa11.02□□□□□ -0.65
ACTN1-205ENST00000538545 IGHV3-66A0A0C4DH42 116 aa11.02□□□□□ -0.65
ACTN1-205ENST00000538545 C1orf196B1AJZ1 125 aa11.02□□□□□ -0.65
ACTN1-205ENST00000538545 CTSGP08311 255 aa11.02□□□□□ -0.65
ACTN1-205ENST00000538545 FAM210BQ96KR6 192 aa11.02□□□□□ -0.65
ACTN1-205ENST00000538545 IGHV3-49A0A0A0MS15 119 aa11.01□□□□□ -0.65
ACTN1-205ENST00000538545 A0A1W2PRE2 83 aa11.01□□□□□ -0.65
ACTN1-205ENST00000538545 CLEC3BP05452 202 aa11.01□□□□□ -0.65
ACTN1-205ENST00000538545 PFN1P07737 140 aaKnown RBP11.01□□□□□ -0.65
ACTN1-205ENST00000538545 MGST1P10620 155 aaKnown RBP11.01□□□□□ -0.65
ACTN1-205ENST00000538545 DEFB112Q30KQ8 113 aa11.01□□□□□ -0.65
ACTN1-205ENST00000538545 CLEC19AQ6UXS0 136 aa11.01□□□□□ -0.65
ACTN1-205ENST00000538545 GNB4Q9HAV0 340 aa11.01□□□□□ -0.65
ACTN1-205ENST00000538545 MRPL27Q9P0M9 148 aaKnown RBP11.01□□□□□ -0.65
ACTN1-205ENST00000538545 MOB4Q9Y3A3 225 aa11.01□□□□□ -0.65
ACTN1-205ENST00000538545 SELENOKQ9Y6D0 94 aa11.01□□□□□ -0.65
ACTN1-205ENST00000538545 TRAV8-1A0A0A6YYK1 113 aa11.01□□□□□ -0.65
ACTN1-205ENST00000538545 ISLRO14498 428 aa11.01□□□□□ -0.65
ACTN1-205ENST00000538545 IGHV4-59P01825 116 aa11.01□□□□□ -0.65
ACTN1-205ENST00000538545 PAX1P15863 534 aa11.01□□□□□ -0.65
ACTN1-205ENST00000538545 SLC25A16P16260 332 aa11.01□□□□□ -0.65
ACTN1-205ENST00000538545 DEFB113Q30KQ7 82 aa11.01□□□□□ -0.65
ACTN1-205ENST00000538545 CIARTQ8N365 385 aaPredicted RBP11.01□□□□□ -0.65
ACTN1-205ENST00000538545 LINC01356Q8N9X3 169 aa11.01□□□□□ -0.65
ACTN1-205ENST00000538545 C11orf52Q96A22 123 aa11.01□□□□□ -0.65
ACTN1-205ENST00000538545 SFRP2Q96HF1 295 aa11.01□□□□□ -0.65
ACTN1-205ENST00000538545 DUX5Q96PT3 197 aa11.01□□□□□ -0.65
ACTN1-205ENST00000538545 RNF2Q99496 336 aa11.01□□□□□ -0.65
ACTN1-205ENST00000538545 ZNF207O43670 478 aaKnown RBP11□□□□□ -0.65
ACTN1-205ENST00000538545 SLC25A5P05141 298 aaKnown RBP11□□□□□ -0.65
ACTN1-205ENST00000538545 FRMD6-AS1P0C7T7 363 aa11□□□□□ -0.65
ACTN1-205ENST00000538545 RPL15P61313 204 aaKnown RBP11□□□□□ -0.65
ACTN1-205ENST00000538545 MEGF9Q9H1U4 602 aa11□□□□□ -0.65
ACTN1-205ENST00000538545 CA1P00915 261 aaPredicted RBP11□□□□□ -0.65
ACTN1-205ENST00000538545 PLA2G2AP14555 144 aa11□□□□□ -0.65
ACTN1-205ENST00000538545 GNG4P50150 75 aa11□□□□□ -0.65
ACTN1-205ENST00000538545 PLP1P60201 277 aa11□□□□□ -0.65
ACTN1-205ENST00000538545 IGFL4Q6B9Z1 124 aa11□□□□□ -0.65
ACTN1-205ENST00000538545 TEX38Q6PEX7 206 aa11□□□□□ -0.65
ACTN1-205ENST00000538545 IL17RELQ6ZVW7 336 aa11□□□□□ -0.65
ACTN1-205ENST00000538545 FAM110DQ8TAY7 271 aaPredicted RBP11□□□□□ -0.65
ACTN1-205ENST00000538545 ZNF414Q96IQ9 312 aa11□□□□□ -0.65
ACTN1-205ENST00000538545 CCDC140Q96MF4 163 aa11□□□□□ -0.65
ACTN1-205ENST00000538545 PPP5D1E7EU14 171 aa10.99□□□□□ -0.65
ACTN1-205ENST00000538545 SPINK4O60575 86 aa10.99□□□□□ -0.65
ACTN1-205ENST00000538545 TOMM40O96008 361 aa10.99□□□□□ -0.65
ACTN1-205ENST00000538545 FLI1Q01543 452 aaPredicted RBP10.99□□□□□ -0.65
ACTN1-205ENST00000538545 IGLV2-8P01709 118 aa10.99□□□□□ -0.65
ACTN1-205ENST00000538545 FOLR2P14207 255 aa10.99□□□□□ -0.65
ACTN1-205ENST00000538545 AKR1D1P51857 326 aa10.99□□□□□ -0.65
ACTN1-205ENST00000538545 RAB5BP61020 215 aa10.99□□□□□ -0.65
ACTN1-205ENST00000538545 SLC35B1P78383 322 aa10.99□□□□□ -0.65
ACTN1-205ENST00000538545 PRR27Q6MZM9 219 aa10.99□□□□□ -0.65
ACTN1-205ENST00000538545 TXNDC17Q9BRA2 123 aa10.99□□□□□ -0.65
ACTN1-205ENST00000538545 Q9H3A6 140 aa10.99□□□□□ -0.65
ACTN1-205ENST00000538545 THYN1Q9P016 225 aa10.99□□□□□ -0.65
ACTN1-205ENST00000538545 CXorf65A6NEN9 183 aa10.99□□□□□ -0.65
ACTN1-205ENST00000538545 C10orf99Q6UWK7 81 aa10.99□□□□□ -0.65
ACTN1-205ENST00000538545 WFDC11Q8NEX6 87 aa10.99□□□□□ -0.65
ACTN1-205ENST00000538545 OR1L6Q8NGR2 347 aa10.99□□□□□ -0.65
ACTN1-205ENST00000538545 TMEM242Q9NWH2 141 aa10.99□□□□□ -0.65
ACTN1-205ENST00000538545 AKAP9Q99996 3911 aa10.98□□□□□ -0.65
ACTN1-205ENST00000538545 ZNF98A6NK75 572 aa10.98□□□□□ -0.65
ACTN1-205ENST00000538545 M0R3E3 92 aa10.98□□□□□ -0.65
ACTN1-205ENST00000538545 PEX7O00628 323 aa10.98□□□□□ -0.65
ACTN1-205ENST00000538545 TRBV12-3P01733 135 aa10.98□□□□□ -0.65
ACTN1-205ENST00000538545 IGHV3-11P01762 117 aa10.98□□□□□ -0.65
ACTN1-205ENST00000538545 IGHV4-31P0DP07 118 aa10.98□□□□□ -0.65
ACTN1-205ENST00000538545 DSCR9P59020 149 aa10.98□□□□□ -0.65
ACTN1-205ENST00000538545 ERVFC1-1P60608 527 aa10.98□□□□□ -0.65
ACTN1-205ENST00000538545 PRR31Q5SQ13 230 aa10.98□□□□□ -0.65
ACTN1-205ENST00000538545 KLK15Q9H2R5 256 aa10.98□□□□□ -0.65
ACTN1-205ENST00000538545 TRAV41A0A0B4J266 112 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms