RNA–Protein interactions for RNA: ENST00000536404.6

CHRNB1-202, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNB1, Length 1,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-202ENST00000536404 MALRD1Q5VYJ5 2156 aa9.4□□□□□ -0.9
CHRNB1-202ENST00000536404 A0A1B0GUS0 222 aa9.4□□□□□ -0.9
CHRNB1-202ENST00000536404 OR2T8A6NH00 312 aa9.4□□□□□ -0.9
CHRNB1-202ENST00000536404 VWC2LB2RUY7 222 aa9.4□□□□□ -0.9
CHRNB1-202ENST00000536404 F2RL2O00254 374 aa9.4□□□□□ -0.9
CHRNB1-202ENST00000536404 RRHO14718 337 aa9.4□□□□□ -0.9
CHRNB1-202ENST00000536404 IGLV1-44P01699 117 aa9.4□□□□□ -0.9
CHRNB1-202ENST00000536404 AMY1AP04745 511 aa9.4□□□□□ -0.9
CHRNB1-202ENST00000536404 C3orf79P0CE67 100 aa9.4□□□□□ -0.9
CHRNB1-202ENST00000536404 CD33P20138 364 aa9.4□□□□□ -0.9
CHRNB1-202ENST00000536404 USF1P22415 310 aaPredicted RBP9.4□□□□□ -0.9
CHRNB1-202ENST00000536404 PRDX2P32119 198 aa9.4□□□□□ -0.9
CHRNB1-202ENST00000536404 SSTR5P35346 364 aa9.4□□□□□ -0.9
CHRNB1-202ENST00000536404 IER3P46695 156 aa9.4□□□□□ -0.9
CHRNB1-202ENST00000536404 RAB9AP51151 201 aa9.4□□□□□ -0.9
CHRNB1-202ENST00000536404 ADIPOQQ15848 244 aa9.4□□□□□ -0.9
CHRNB1-202ENST00000536404 FAM162BQ5T6X4 162 aa9.4□□□□□ -0.9
CHRNB1-202ENST00000536404 UFSP1Q6NVU6 142 aa9.4□□□□□ -0.9
CHRNB1-202ENST00000536404 GCSAMQ8N6F7 178 aa9.4□□□□□ -0.9
CHRNB1-202ENST00000536404 SPATA3Q8NHX4 192 aa9.4□□□□□ -0.9
CHRNB1-202ENST00000536404 COMMD5Q9GZQ3 224 aa9.4□□□□□ -0.9
CHRNB1-202ENST00000536404 WASHC3Q9Y3C0 194 aa9.4□□□□□ -0.9
CHRNB1-202ENST00000536404 V9GYV3 84 aa9.4□□□□□ -0.9
CHRNB1-202ENST00000536404 SAP30O75446 220 aa9.39□□□□□ -0.91
CHRNB1-202ENST00000536404 LINC00869P0C866 280 aa9.39□□□□□ -0.91
CHRNB1-202ENST00000536404 CRYBA4P53673 196 aa9.39□□□□□ -0.91
CHRNB1-202ENST00000536404 PRR20EP86478 221 aa9.39□□□□□ -0.91
CHRNB1-202ENST00000536404 PRR20CP86479 221 aa9.39□□□□□ -0.91
CHRNB1-202ENST00000536404 PRR20DP86480 221 aa9.39□□□□□ -0.91
CHRNB1-202ENST00000536404 PRR20BP86481 221 aa9.39□□□□□ -0.91
CHRNB1-202ENST00000536404 PRR20AP86496 221 aa9.39□□□□□ -0.91
CHRNB1-202ENST00000536404 C3orf36Q3SXR2 165 aa9.39□□□□□ -0.91
CHRNB1-202ENST00000536404 MBNL2Q5VZF2 373 aaKnown RBP9.39□□□□□ -0.91
CHRNB1-202ENST00000536404 DPF1Q92782 380 aa9.39□□□□□ -0.91
CHRNB1-202ENST00000536404 MRAP2Q96G30 205 aa9.39□□□□□ -0.91
CHRNB1-202ENST00000536404 FAM103A1Q9BTL3 118 aaKnown RBP9.39□□□□□ -0.91
CHRNB1-202ENST00000536404 MRPL32Q9BYC8 188 aaKnown RBP9.39□□□□□ -0.91
CHRNB1-202ENST00000536404 C1RLQ9NZP8 487 aa9.39□□□□□ -0.91
CHRNB1-202ENST00000536404 NAT8BQ9UHF3 227 aa9.39□□□□□ -0.91
CHRNB1-202ENST00000536404 ZNF257Q9Y2Q1 563 aa9.39□□□□□ -0.91
CHRNB1-202ENST00000536404 PPIAL4EA0A075B759 164 aa9.38□□□□□ -0.91
CHRNB1-202ENST00000536404 LOC102724200A0A096LPH7 203 aaPredicted RBP9.38□□□□□ -0.91
CHRNB1-202ENST00000536404 IGHV3-43A0A0B4J1X8 118 aa9.38□□□□□ -0.91
CHRNB1-202ENST00000536404 PPIAL4CA0A0B4J2A2 164 aa9.38□□□□□ -0.91
CHRNB1-202ENST00000536404 A0A1W2PRE2 83 aa9.38□□□□□ -0.91
CHRNB1-202ENST00000536404 PGPEP1LA6NFU8 196 aa9.38□□□□□ -0.91
CHRNB1-202ENST00000536404 B9A039 149 aa9.38□□□□□ -0.91
CHRNB1-202ENST00000536404 PPIAL4DF5H284 164 aa9.38□□□□□ -0.91
CHRNB1-202ENST00000536404 H0YJW9 148 aa9.38□□□□□ -0.91
CHRNB1-202ENST00000536404 WNT9BO14905 357 aa9.38□□□□□ -0.91
CHRNB1-202ENST00000536404 SLC25A17O43808 307 aa9.38□□□□□ -0.91
CHRNB1-202ENST00000536404 IGKV3-15P01624 115 aa9.38□□□□□ -0.91
CHRNB1-202ENST00000536404 PPIAL4FP0DN26 164 aa9.38□□□□□ -0.91
CHRNB1-202ENST00000536404 IGHV3-43DP0DP04 118 aa9.38□□□□□ -0.91
CHRNB1-202ENST00000536404 AZU1P20160 251 aa9.38□□□□□ -0.91
CHRNB1-202ENST00000536404 CFHR2P36980 270 aa9.38□□□□□ -0.91
CHRNB1-202ENST00000536404 MPV17P39210 176 aa9.38□□□□□ -0.91
CHRNB1-202ENST00000536404 HIST1H1AQ02539 215 aaPredicted RBP9.38□□□□□ -0.91
CHRNB1-202ENST00000536404 SLAQ13239 276 aa9.38□□□□□ -0.91
CHRNB1-202ENST00000536404 POU2AF1Q16633 256 aa9.38□□□□□ -0.91
CHRNB1-202ENST00000536404 ALKBH6Q3KRA9 238 aa9.38□□□□□ -0.91
CHRNB1-202ENST00000536404 SLC25A34Q6PIV7 304 aa9.38□□□□□ -0.91
CHRNB1-202ENST00000536404 FAM169BQ8N8A8 192 aa9.38□□□□□ -0.91
CHRNB1-202ENST00000536404 PLEKHA3Q9HB20 300 aa9.38□□□□□ -0.91
CHRNB1-202ENST00000536404 IGHV4-61A0A0C4DH41 118 aa9.38□□□□□ -0.91
CHRNB1-202ENST00000536404 OR11H12B2RN74 326 aa9.38□□□□□ -0.91
CHRNB1-202ENST00000536404 C3orf80F5H4A9 247 aa9.38□□□□□ -0.91
CHRNB1-202ENST00000536404 J3KRW8 73 aa9.38□□□□□ -0.91
CHRNB1-202ENST00000536404 K7EN84 100 aa9.38□□□□□ -0.91
CHRNB1-202ENST00000536404 K7EP34 96 aa9.38□□□□□ -0.91
CHRNB1-202ENST00000536404 CA2P00918 260 aa9.38□□□□□ -0.91
CHRNB1-202ENST00000536404 DEFA4P12838 97 aa9.38□□□□□ -0.91
CHRNB1-202ENST00000536404 CENPWQ5EE01 88 aa9.38□□□□□ -0.91
CHRNB1-202ENST00000536404 ZNF826PQ6ZT77 177 aa9.38□□□□□ -0.91
CHRNB1-202ENST00000536404 FA2HQ7L5A8 372 aa9.38□□□□□ -0.91
CHRNB1-202ENST00000536404 OR8I2Q8N0Y5 310 aa9.38□□□□□ -0.91
CHRNB1-202ENST00000536404 ZCCHC24Q8N2G6 241 aaKnown RBP9.38□□□□□ -0.91
CHRNB1-202ENST00000536404 NUP37Q8NFH4 326 aa9.38□□□□□ -0.91
CHRNB1-202ENST00000536404 OR11H1Q8NG94 326 aa9.38□□□□□ -0.91
CHRNB1-202ENST00000536404 OR11H2Q8NH07 326 aa9.38□□□□□ -0.91
CHRNB1-202ENST00000536404 RFESDQ8TAC1 157 aa9.38□□□□□ -0.91
CHRNB1-202ENST00000536404 LRRC29Q8WV35 223 aa9.38□□□□□ -0.91
CHRNB1-202ENST00000536404 SSMEM1Q8WWF3 244 aa9.38□□□□□ -0.91
CHRNB1-202ENST00000536404 PIMREGQ9BSJ6 248 aa9.38□□□□□ -0.91
CHRNB1-202ENST00000536404 TMEM14BQ9NUH8 114 aa9.38□□□□□ -0.91
CHRNB1-202ENST00000536404 A6NDN8 102 aa9.37□□□□□ -0.91
CHRNB1-202ENST00000536404 VSTM5A8MXK1 200 aa9.37□□□□□ -0.91
CHRNB1-202ENST00000536404 SLC17A3O00476 420 aa9.37□□□□□ -0.91
CHRNB1-202ENST00000536404 PLP1P60201 277 aa9.37□□□□□ -0.91
CHRNB1-202ENST00000536404 EDDM3AQ14507 147 aa9.37□□□□□ -0.91
CHRNB1-202ENST00000536404 PSG5Q15238 335 aa9.37□□□□□ -0.91
CHRNB1-202ENST00000536404 MPV17L2Q567V2 206 aa9.37□□□□□ -0.91
CHRNB1-202ENST00000536404 IL17RELQ6ZVW7 336 aa9.37□□□□□ -0.91
CHRNB1-202ENST00000536404 ABHD12Q8N2K0 398 aa9.37□□□□□ -0.91
CHRNB1-202ENST00000536404 WIPF2Q8TF74 440 aaPredicted RBP9.37□□□□□ -0.91
CHRNB1-202ENST00000536404 DDB2Q92466 427 aa9.37□□□□□ -0.91
CHRNB1-202ENST00000536404 GNB4Q9HAV0 340 aa9.37□□□□□ -0.91
CHRNB1-202ENST00000536404 ZNF331Q9NQX6 463 aaPredicted RBP9.37□□□□□ -0.91
CHRNB1-202ENST00000536404 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.36□□□□□ -0.91
CHRNB1-202ENST00000536404 TRAV26-1A0A087WT03 109 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms