RNA–Protein interactions for RNA: ENST00000535927.5

VAMP1-205, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-205ENST00000535927 HSD17B11Q8NBQ5 300 aa12.41□□□□□ -0.42
VAMP1-205ENST00000535927 OR9G4Q8NGQ1 327 aa12.41□□□□□ -0.42
VAMP1-205ENST00000535927 DLX4Q92988 240 aaPredicted RBP12.41□□□□□ -0.42
VAMP1-205ENST00000535927 GRAMD2BQ96HH9 432 aa12.41□□□□□ -0.42
VAMP1-205ENST00000535927 GPR61Q9BZJ8 451 aa12.41□□□□□ -0.42
VAMP1-205ENST00000535927 BOLA2-SMG1P6H3BVE0 249 aa12.4□□□□□ -0.42
VAMP1-205ENST00000535927 M6PRP20645 277 aa12.4□□□□□ -0.42
VAMP1-205ENST00000535927 SLURP1P55000 103 aa12.4□□□□□ -0.42
VAMP1-205ENST00000535927 MIC13Q5XKP0 118 aa12.4□□□□□ -0.42
VAMP1-205ENST00000535927 LINC00482Q8N8I6 264 aa12.4□□□□□ -0.42
VAMP1-205ENST00000535927 GPR82Q96P67 336 aa12.4□□□□□ -0.42
VAMP1-205ENST00000535927 RSG1Q9BU20 258 aa12.4□□□□□ -0.42
VAMP1-205ENST00000535927 HIGD1AQ9Y241 93 aa12.4□□□□□ -0.42
VAMP1-205ENST00000535927 U3KQE9 123 aa12.4□□□□□ -0.42
VAMP1-205ENST00000535927 MGAM2Q2M2H8 2515 aa12.4□□□□□ -0.42
VAMP1-205ENST00000535927 COX7A2P2O60397 106 aa12.39□□□□□ -0.43
VAMP1-205ENST00000535927 LYZP61626 148 aa12.39□□□□□ -0.43
VAMP1-205ENST00000535927 FFAR4Q5NUL3 377 aa12.39□□□□□ -0.43
VAMP1-205ENST00000535927 C10orf113Q5VZT2 155 aa12.39□□□□□ -0.43
VAMP1-205ENST00000535927 DPPA3Q6W0C5 159 aa12.39□□□□□ -0.43
VAMP1-205ENST00000535927 ZNF414Q96IQ9 312 aa12.39□□□□□ -0.43
VAMP1-205ENST00000535927 C20orf24Q9BUV8 137 aa12.39□□□□□ -0.43
VAMP1-205ENST00000535927 MRPL32Q9BYC8 188 aaKnown RBP12.39□□□□□ -0.43
VAMP1-205ENST00000535927 TECRQ9NZ01 308 aaKnown RBP12.39□□□□□ -0.43
VAMP1-205ENST00000535927 TENM1Q9UKZ4 2725 aa12.39□□□□□ -0.43
VAMP1-205ENST00000535927 IGHV7-4-1A0A0J9YVY3 117 aa12.38□□□□□ -0.43
VAMP1-205ENST00000535927 ORM2P19652 201 aa12.38□□□□□ -0.43
VAMP1-205ENST00000535927 NKX2-5P52952 324 aaPredicted RBP12.38□□□□□ -0.43
VAMP1-205ENST00000535927 RHOBP62745 196 aa12.38□□□□□ -0.43
VAMP1-205ENST00000535927 AKR1C8PQ5T2L2 129 aa12.38□□□□□ -0.43
VAMP1-205ENST00000535927 UNQ9165/PRO28630Q6UXU0 137 aa12.38□□□□□ -0.43
VAMP1-205ENST00000535927 TMEM182Q6ZP80 229 aaPredicted RBP12.38□□□□□ -0.43
VAMP1-205ENST00000535927 STXBP6Q8NFX7 210 aa12.38□□□□□ -0.43
VAMP1-205ENST00000535927 OR1B1Q8NGR6 318 aa12.38□□□□□ -0.43
VAMP1-205ENST00000535927 ST8SIA2Q92186 375 aa12.38□□□□□ -0.43
VAMP1-205ENST00000535927 RCC1LQ96I51 464 aaKnown RBP12.38□□□□□ -0.43
VAMP1-205ENST00000535927 SLC25A32Q9H2D1 315 aa12.38□□□□□ -0.43
VAMP1-205ENST00000535927 SMPXQ9UHP9 88 aa12.38□□□□□ -0.43
VAMP1-205ENST00000535927 IGHV3-35A0A0C4DH35 117 aa12.37□□□□□ -0.43
VAMP1-205ENST00000535927 C2orf70A6NJV1 201 aa12.37□□□□□ -0.43
VAMP1-205ENST00000535927 OR5G3P0C626 314 aa12.37□□□□□ -0.43
VAMP1-205ENST00000535927 CBLN1P23435 193 aa12.37□□□□□ -0.43
VAMP1-205ENST00000535927 GATA2P23769 480 aaPredicted RBP12.37□□□□□ -0.43
VAMP1-205ENST00000535927 USF2Q15853 346 aaPredicted RBP12.37□□□□□ -0.43
VAMP1-205ENST00000535927 OR2K2Q8NGT1 345 aa12.37□□□□□ -0.43
VAMP1-205ENST00000535927 SHANK2-AS3Q9BTD1 123 aa12.37□□□□□ -0.43
VAMP1-205ENST00000535927 PBDC1Q9BVG4 233 aa12.37□□□□□ -0.43
VAMP1-205ENST00000535927 VSIRQ9H7M9 311 aa12.37□□□□□ -0.43
VAMP1-205ENST00000535927 A0A1W2PPV4 95 aa12.36□□□□□ -0.43
VAMP1-205ENST00000535927 TMEM213A2RRL7 107 aa12.36□□□□□ -0.43
VAMP1-205ENST00000535927 BUB3O43684 328 aa12.36□□□□□ -0.43
VAMP1-205ENST00000535927 MEOX2P50222 304 aa12.36□□□□□ -0.43
VAMP1-205ENST00000535927 TAS2R45P59539 299 aa12.36□□□□□ -0.43
VAMP1-205ENST00000535927 TMEM41BQ5BJD5 291 aa12.36□□□□□ -0.43
VAMP1-205ENST00000535927 LRRC20Q8TCA0 184 aa12.36□□□□□ -0.43
VAMP1-205ENST00000535927 TMEM37Q8WXS4 190 aa12.36□□□□□ -0.43
VAMP1-205ENST00000535927 DUX3Q96PT4 197 aa12.36□□□□□ -0.43
VAMP1-205ENST00000535927 SLC25A39Q9BZJ4 359 aaPredicted RBP12.36□□□□□ -0.43
VAMP1-205ENST00000535927 ZMAT5Q9UDW3 170 aaKnown RBP12.36□□□□□ -0.43
VAMP1-205ENST00000535927 TRAV25A0A0B4J276 109 aa12.35□□□□□ -0.43
VAMP1-205ENST00000535927 HELTA6NFD8 242 aa12.35□□□□□ -0.43
VAMP1-205ENST00000535927 SEC14L6B5MCN3 397 aa12.35□□□□□ -0.43
VAMP1-205ENST00000535927 CSN3P07498 182 aa12.35□□□□□ -0.43
VAMP1-205ENST00000535927 FOLR2P14207 255 aa12.35□□□□□ -0.43
VAMP1-205ENST00000535927 RPL7P18124 248 aaKnown RBP12.35□□□□□ -0.43
VAMP1-205ENST00000535927 CD33P20138 364 aa12.35□□□□□ -0.43
VAMP1-205ENST00000535927 TM4SF20Q53R12 229 aa12.35□□□□□ -0.43
VAMP1-205ENST00000535927 C9orf66Q5T8R8 295 aa12.35□□□□□ -0.43
VAMP1-205ENST00000535927 SAMD13Q5VXD3 122 aa12.35□□□□□ -0.43
VAMP1-205ENST00000535927 PATE2Q6UY27 113 aa12.35□□□□□ -0.43
VAMP1-205ENST00000535927 LINC00305Q7Z4B0 112 aa12.35□□□□□ -0.43
VAMP1-205ENST00000535927 OR10G4Q8NGN3 311 aa12.35□□□□□ -0.43
VAMP1-205ENST00000535927 OR10G9Q8NGN4 311 aa12.35□□□□□ -0.43
VAMP1-205ENST00000535927 OR10G7Q8NGN6 311 aa12.35□□□□□ -0.43
VAMP1-205ENST00000535927 ACTR3CQ9C0K3 210 aaPredicted RBP12.35□□□□□ -0.43
VAMP1-205ENST00000535927 ZNF98A6NK75 572 aa12.34□□□□□ -0.43
VAMP1-205ENST00000535927 H3BRN7 92 aa12.34□□□□□ -0.43
VAMP1-205ENST00000535927 CHEK1O14757 476 aa12.34□□□□□ -0.43
VAMP1-205ENST00000535927 PRR31Q5SQ13 230 aa12.34□□□□□ -0.43
VAMP1-205ENST00000535927 C16orf54Q6UWD8 224 aa12.34□□□□□ -0.43
VAMP1-205ENST00000535927 IL34Q6ZMJ4 242 aa12.34□□□□□ -0.43
VAMP1-205ENST00000535927 RHPN1-AS1Q9BWJ2 59 aa12.34□□□□□ -0.43
VAMP1-205ENST00000535927 FUT9Q9Y231 359 aa12.34□□□□□ -0.43
VAMP1-205ENST00000535927 IFNA7P01567 189 aa12.33□□□□□ -0.44
VAMP1-205ENST00000535927 SULT1A2P50226 295 aa12.33□□□□□ -0.44
VAMP1-205ENST00000535927 FAM78BQ5VT40 261 aa12.33□□□□□ -0.44
VAMP1-205ENST00000535927 PQLC2Q6ZP29 291 aa12.33□□□□□ -0.44
VAMP1-205ENST00000535927 BPIFA4PQ86YQ2 179 aa12.33□□□□□ -0.44
VAMP1-205ENST00000535927 OR8I2Q8N0Y5 310 aa12.33□□□□□ -0.44
VAMP1-205ENST00000535927 RNF141Q8WVD5 230 aa12.33□□□□□ -0.44
VAMP1-205ENST00000535927 SH3BGRL3Q9H299 93 aa12.33□□□□□ -0.44
VAMP1-205ENST00000535927 RPRMQ9NS64 109 aa12.33□□□□□ -0.44
VAMP1-205ENST00000535927 TMEM14CQ9P0S9 112 aa12.33□□□□□ -0.44
VAMP1-205ENST00000535927 MEGF8Q7Z7M0 2845 aa12.33□□□□□ -0.44
VAMP1-205ENST00000535927 GALR1P47211 349 aa12.32□□□□□ -0.44
VAMP1-205ENST00000535927 HIST2H2BDQ6DRA6 164 aa12.32□□□□□ -0.44
VAMP1-205ENST00000535927 TMED6Q8WW62 240 aa12.32□□□□□ -0.44
VAMP1-205ENST00000535927 DOK5Q9P104 306 aa12.32□□□□□ -0.44
VAMP1-205ENST00000535927 TRAV2A0A0B4J234 112 aa12.31□□□□□ -0.44
VAMP1-205ENST00000535927 CTXND1A0A1B0GTU2 59 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms