RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 MAGT1Q9H0U3 335 aa9.58□□□□□ -0.88
CLSTN3-205ENST00000535452 TMED3Q9Y3Q3 217 aa9.58□□□□□ -0.88
CLSTN3-205ENST00000535452 HYDINQ4G0P3 5121 aa9.57□□□□□ -0.88
CLSTN3-205ENST00000535452 ELOA3CA0A087WX78 387 aaPredicted RBP9.57□□□□□ -0.88
CLSTN3-205ENST00000535452 RAP2BP61225 183 aa9.57□□□□□ -0.88
CLSTN3-205ENST00000535452 PSG9Q00887 426 aa9.57□□□□□ -0.88
CLSTN3-205ENST00000535452 OR2F1Q13607 317 aa9.57□□□□□ -0.88
CLSTN3-205ENST00000535452 GAMTQ14353 236 aa9.57□□□□□ -0.88
CLSTN3-205ENST00000535452 RRN3P1Q2M238 152 aa9.57□□□□□ -0.88
CLSTN3-205ENST00000535452 ZNF767PQ75MW2 155 aa9.57□□□□□ -0.88
CLSTN3-205ENST00000535452 POM121L12Q8N7R1 296 aa9.57□□□□□ -0.88
CLSTN3-205ENST00000535452 DEDD2Q8WXF8 326 aa9.57□□□□□ -0.88
CLSTN3-205ENST00000535452 TRGV9Q99603 122 aa9.57□□□□□ -0.88
CLSTN3-205ENST00000535452 SAV1Q9H4B6 383 aaPredicted RBP9.57□□□□□ -0.88
CLSTN3-205ENST00000535452 SLC25A22Q9H936 323 aa9.57□□□□□ -0.88
CLSTN3-205ENST00000535452 PRR13Q9NZ81 148 aa9.57□□□□□ -0.88
CLSTN3-205ENST00000535452 PLECQ15149 4684 aaKnown RBP9.56□□□□□ -0.88
CLSTN3-205ENST00000535452 SMCO3A2RU48 225 aa9.56□□□□□ -0.88
CLSTN3-205ENST00000535452 GIG44P09565 113 aaPredicted RBP9.56□□□□□ -0.88
CLSTN3-205ENST00000535452 IAPPP10997 89 aa9.56□□□□□ -0.88
CLSTN3-205ENST00000535452 SLC25A6P12236 298 aa9.56□□□□□ -0.88
CLSTN3-205ENST00000535452 HTN3P15516 51 aa9.56□□□□□ -0.88
CLSTN3-205ENST00000535452 ALDH3B2P48448 385 aa9.56□□□□□ -0.88
CLSTN3-205ENST00000535452 C12orf74Q32Q52 190 aa9.56□□□□□ -0.88
CLSTN3-205ENST00000535452 CSNK1G2-AS1Q8NCQ2 148 aa9.56□□□□□ -0.88
CLSTN3-205ENST00000535452 OR1B1Q8NGR6 318 aa9.56□□□□□ -0.88
CLSTN3-205ENST00000535452 LRRC20Q8TCA0 184 aa9.56□□□□□ -0.88
CLSTN3-205ENST00000535452 NIPSNAP3BQ9BS92 247 aa9.56□□□□□ -0.88
CLSTN3-205ENST00000535452 SLC45A2Q9UMX9 530 aa9.56□□□□□ -0.88
CLSTN3-205ENST00000535452 DUSP14O95147 198 aaKnown RBP9.55□□□□□ -0.88
CLSTN3-205ENST00000535452 ORM2P19652 201 aa9.55□□□□□ -0.88
CLSTN3-205ENST00000535452 FXYD7P58549 80 aa9.55□□□□□ -0.88
CLSTN3-205ENST00000535452 ZNF90Q03938 601 aa9.55□□□□□ -0.88
CLSTN3-205ENST00000535452 FGL1Q08830 312 aa9.55□□□□□ -0.88
CLSTN3-205ENST00000535452 DYNC2LI1Q8TCX1 351 aa9.55□□□□□ -0.88
CLSTN3-205ENST00000535452 STRAPQ9Y3F4 350 aaKnown RBP9.55□□□□□ -0.88
CLSTN3-205ENST00000535452 SYNGR2O43760 224 aa9.54□□□□□ -0.88
CLSTN3-205ENST00000535452 TNFSF8P32971 234 aa9.54□□□□□ -0.88
CLSTN3-205ENST00000535452 B2MP61769 119 aa9.54□□□□□ -0.88
CLSTN3-205ENST00000535452 DAD1P61803 113 aa9.54□□□□□ -0.88
CLSTN3-205ENST00000535452 PRR20EP86478 221 aa9.54□□□□□ -0.88
CLSTN3-205ENST00000535452 PRR20CP86479 221 aa9.54□□□□□ -0.88
CLSTN3-205ENST00000535452 PRR20DP86480 221 aa9.54□□□□□ -0.88
CLSTN3-205ENST00000535452 PRR20BP86481 221 aa9.54□□□□□ -0.88
CLSTN3-205ENST00000535452 PRR20AP86496 221 aa9.54□□□□□ -0.88
CLSTN3-205ENST00000535452 SPANXN5Q5MJ07 72 aa9.54□□□□□ -0.88
CLSTN3-205ENST00000535452 GSG1LQ6UXU4 331 aa9.54□□□□□ -0.88
CLSTN3-205ENST00000535452 ZNF705AQ6ZN79 300 aaPredicted RBP9.54□□□□□ -0.88
CLSTN3-205ENST00000535452 TMEM170AQ8WVE7 144 aa9.54□□□□□ -0.88
CLSTN3-205ENST00000535452 CLUHP3Q96NS8 147 aa9.54□□□□□ -0.88
CLSTN3-205ENST00000535452 DOK5Q9P104 306 aa9.54□□□□□ -0.88
CLSTN3-205ENST00000535452 CELA1Q9UNI1 258 aa9.54□□□□□ -0.88
CLSTN3-205ENST00000535452 LOC102723971A0A1B0GUV8 181 aa9.53□□□□□ -0.88
CLSTN3-205ENST00000535452 CENPXA8MT69 81 aa9.53□□□□□ -0.88
CLSTN3-205ENST00000535452 IL5P05113 134 aa9.53□□□□□ -0.88
CLSTN3-205ENST00000535452 HOXB5P09067 269 aa9.53□□□□□ -0.88
CLSTN3-205ENST00000535452 SPANXN2Q5MJ10 180 aa9.53□□□□□ -0.88
CLSTN3-205ENST00000535452 FAM78BQ5VT40 261 aa9.53□□□□□ -0.88
CLSTN3-205ENST00000535452 TRIQKQ629K1 86 aa9.53□□□□□ -0.88
CLSTN3-205ENST00000535452 OR4D5Q8NGN0 318 aa9.53□□□□□ -0.88
CLSTN3-205ENST00000535452 ATG101Q9BSB4 218 aa9.53□□□□□ -0.88
CLSTN3-205ENST00000535452 RSG1Q9BU20 258 aa9.53□□□□□ -0.88
CLSTN3-205ENST00000535452 ZNF705FA8MVS1 300 aaPredicted RBP9.52□□□□□ -0.89
CLSTN3-205ENST00000535452 INSP01308 110 aa9.52□□□□□ -0.89
CLSTN3-205ENST00000535452 ZNF705DP0CH99 300 aaPredicted RBP9.52□□□□□ -0.89
CLSTN3-205ENST00000535452 ZNF705BP0CI00 300 aaPredicted RBP9.52□□□□□ -0.89
CLSTN3-205ENST00000535452 RPL7P18124 248 aaKnown RBP9.52□□□□□ -0.89
CLSTN3-205ENST00000535452 PAX9P55771 341 aa9.52□□□□□ -0.89
CLSTN3-205ENST00000535452 FAM222AQ5U5X8 452 aa9.52□□□□□ -0.89
CLSTN3-205ENST00000535452 LRTM2Q8N967 370 aa9.52□□□□□ -0.89
CLSTN3-205ENST00000535452 WDR12Q9GZL7 423 aaKnown RBP9.52□□□□□ -0.89
CLSTN3-205ENST00000535452 PRSS29PA6NIE9 313 aa9.51□□□□□ -0.89
CLSTN3-205ENST00000535452 ZNF98A6NK75 572 aa9.51□□□□□ -0.89
CLSTN3-205ENST00000535452 H3BMQ9 156 aa9.51□□□□□ -0.89
CLSTN3-205ENST00000535452 SFT2D2O95562 160 aa9.51□□□□□ -0.89
CLSTN3-205ENST00000535452 OR5G3P0C626 314 aa9.51□□□□□ -0.89
CLSTN3-205ENST00000535452 UBE2MP61081 183 aaKnown RBP9.51□□□□□ -0.89
CLSTN3-205ENST00000535452 RHOBP62745 196 aa9.51□□□□□ -0.89
CLSTN3-205ENST00000535452 OXA1LQ15070 435 aa9.51□□□□□ -0.89
CLSTN3-205ENST00000535452 GDF5OSQ5U4N7 250 aa9.51□□□□□ -0.89
CLSTN3-205ENST00000535452 THAP8Q8NA92 274 aa9.51□□□□□ -0.89
CLSTN3-205ENST00000535452 SLIRPQ9GZT3 109 aaKnown RBP9.51□□□□□ -0.89
CLSTN3-205ENST00000535452 SLC35B3Q9H1N7 401 aa9.51□□□□□ -0.89
CLSTN3-205ENST00000535452 MGAT4CQ9UBM8 478 aa9.51□□□□□ -0.89
CLSTN3-205ENST00000535452 DKK2Q9UBU2 259 aa9.51□□□□□ -0.89
CLSTN3-205ENST00000535452 HIGD1AQ9Y241 93 aa9.51□□□□□ -0.89
CLSTN3-205ENST00000535452 YTHDF2Q9Y5A9 579 aaKnown RBP9.51□□□□□ -0.89
CLSTN3-205ENST00000535452 A0A0J9YX75 114 aa9.5□□□□□ -0.89
CLSTN3-205ENST00000535452 NAP1L6A6NFF2 107 aa9.5□□□□□ -0.89
CLSTN3-205ENST00000535452 M0R2N4 97 aa9.5□□□□□ -0.89
CLSTN3-205ENST00000535452 HYPMO75409 117 aa9.5□□□□□ -0.89
CLSTN3-205ENST00000535452 ANXA7P20073 488 aaKnown RBP9.5□□□□□ -0.89
CLSTN3-205ENST00000535452 SELENOTP62341 195 aa9.5□□□□□ -0.89
CLSTN3-205ENST00000535452 ZNF79Q15937 498 aa9.5□□□□□ -0.89
CLSTN3-205ENST00000535452 C15orf53Q8NAA6 179 aa9.5□□□□□ -0.89
CLSTN3-205ENST00000535452 ZNF738Q8NE65 137 aa9.5□□□□□ -0.89
CLSTN3-205ENST00000535452 IGF2BP2-AS1Q96M15 143 aa9.5□□□□□ -0.89
CLSTN3-205ENST00000535452 SLC25A32Q9H2D1 315 aa9.5□□□□□ -0.89
CLSTN3-205ENST00000535452 IGKV1D-37A0A075B6S9 117 aa9.49□□□□□ -0.89
CLSTN3-205ENST00000535452 H3BP45 60 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms