RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 DTYMKP23919 212 aa6.61□□□□□ -1.35
SFSWAP-202ENST00000535202 SLURP1P55000 103 aa6.61□□□□□ -1.35
SFSWAP-202ENST00000535202 TPPP2P59282 170 aa6.61□□□□□ -1.35
SFSWAP-202ENST00000535202 BAXQ07812 192 aa6.61□□□□□ -1.35
SFSWAP-202ENST00000535202 ZNF562Q6V9R5 426 aa6.61□□□□□ -1.35
SFSWAP-202ENST00000535202 ZNF66Q6ZN08 573 aa6.61□□□□□ -1.35
SFSWAP-202ENST00000535202 CYP2G1PQ6ZSU1 146 aa6.61□□□□□ -1.35
SFSWAP-202ENST00000535202 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.61□□□□□ -1.35
SFSWAP-202ENST00000535202 OR51G1Q8NGK1 321 aa6.61□□□□□ -1.35
SFSWAP-202ENST00000535202 OR5B3Q8NH48 314 aa6.61□□□□□ -1.35
SFSWAP-202ENST00000535202 C5orf30Q96GV9 206 aa6.61□□□□□ -1.35
SFSWAP-202ENST00000535202 MS4A10Q96PG2 267 aa6.61□□□□□ -1.35
SFSWAP-202ENST00000535202 WFDC1Q9HC57 220 aa6.61□□□□□ -1.35
SFSWAP-202ENST00000535202 ZNF355PQ9NSJ1 428 aa6.61□□□□□ -1.35
SFSWAP-202ENST00000535202 MRPL27Q9P0M9 148 aaKnown RBP6.61□□□□□ -1.35
SFSWAP-202ENST00000535202 GSKIPQ9P0R6 139 aa6.61□□□□□ -1.35
SFSWAP-202ENST00000535202 NAT8Q9UHE5 227 aa6.61□□□□□ -1.35
SFSWAP-202ENST00000535202 TRAV9-1A0A075B6T8 112 aa6.6□□□□□ -1.35
SFSWAP-202ENST00000535202 IGHV4OR15-8A0A075B7B6 117 aa6.6□□□□□ -1.35
SFSWAP-202ENST00000535202 A0A087WW49 117 aa6.6□□□□□ -1.35
SFSWAP-202ENST00000535202 CRYM-AS1A6NIL9 109 aa6.6□□□□□ -1.35
SFSWAP-202ENST00000535202 LINC01619G3V211 115 aa6.6□□□□□ -1.35
SFSWAP-202ENST00000535202 ST8SIA3O43173 380 aa6.6□□□□□ -1.35
SFSWAP-202ENST00000535202 SAP30O75446 220 aa6.6□□□□□ -1.35
SFSWAP-202ENST00000535202 CNIH1O95406 144 aa6.6□□□□□ -1.35
SFSWAP-202ENST00000535202 IGLV2-23P01705 113 aa6.6□□□□□ -1.35
SFSWAP-202ENST00000535202 TRGV3P03979 118 aa6.6□□□□□ -1.35
SFSWAP-202ENST00000535202 NBEAP1P0C6P0 100 aa6.6□□□□□ -1.35
SFSWAP-202ENST00000535202 UCP1P25874 307 aa6.6□□□□□ -1.35
SFSWAP-202ENST00000535202 CNN1P51911 297 aaKnown RBP6.6□□□□□ -1.35
SFSWAP-202ENST00000535202 ELLP55199 621 aaPredicted RBP6.6□□□□□ -1.35
SFSWAP-202ENST00000535202 RAB11AP62491 216 aa6.6□□□□□ -1.35
SFSWAP-202ENST00000535202 SRPXP78539 464 aa6.6□□□□□ -1.35
SFSWAP-202ENST00000535202 RHOGP84095 191 aa6.6□□□□□ -1.35
SFSWAP-202ENST00000535202 RPL19P84098 196 aaKnown RBP6.6□□□□□ -1.35
SFSWAP-202ENST00000535202 FXYD3Q14802 87 aa6.6□□□□□ -1.35
SFSWAP-202ENST00000535202 TOMM20LQ6UXN7 152 aa6.6□□□□□ -1.35
SFSWAP-202ENST00000535202 OR2G3Q8NGZ4 309 aa6.6□□□□□ -1.35
SFSWAP-202ENST00000535202 MBD3L1Q8WWY6 194 aa6.6□□□□□ -1.35
SFSWAP-202ENST00000535202 DLX4Q92988 240 aaPredicted RBP6.6□□□□□ -1.35
SFSWAP-202ENST00000535202 HARBI1Q96MB7 349 aa6.6□□□□□ -1.35
SFSWAP-202ENST00000535202 VAMP8Q9BV40 100 aa6.6□□□□□ -1.35
SFSWAP-202ENST00000535202 UQCR10Q9UDW1 63 aa6.6□□□□□ -1.35
SFSWAP-202ENST00000535202 ZNF256Q9Y2P7 627 aaPredicted RBP6.6□□□□□ -1.35
SFSWAP-202ENST00000535202 MRPS16Q9Y3D3 137 aaKnown RBP6.6□□□□□ -1.35
SFSWAP-202ENST00000535202 COX11Q9Y6N1 276 aa6.6□□□□□ -1.35
SFSWAP-202ENST00000535202 IGKV1D-8A0A087WSZ0 117 aa6.59□□□□□ -1.35
SFSWAP-202ENST00000535202 TMEM250H0YL14 139 aa6.59□□□□□ -1.35
SFSWAP-202ENST00000535202 K7ERU9 68 aa6.59□□□□□ -1.35
SFSWAP-202ENST00000535202 CDS2O95674 445 aa6.59□□□□□ -1.35
SFSWAP-202ENST00000535202 REG1AP05451 166 aa6.59□□□□□ -1.35
SFSWAP-202ENST00000535202 BCL2P10415 239 aa6.59□□□□□ -1.35
SFSWAP-202ENST00000535202 SCGB1A1P11684 91 aa6.59□□□□□ -1.35
SFSWAP-202ENST00000535202 LGALS7P47929 136 aa6.59□□□□□ -1.35
SFSWAP-202ENST00000535202 INSL3P51460 131 aa6.59□□□□□ -1.35
SFSWAP-202ENST00000535202 RTL8BQ17RB0 113 aa6.59□□□□□ -1.35
SFSWAP-202ENST00000535202 MAJINQ3KP22 176 aa6.59□□□□□ -1.35
SFSWAP-202ENST00000535202 KCNIP4Q6PIL6 250 aa6.59□□□□□ -1.35
SFSWAP-202ENST00000535202 C16orf54Q6UWD8 224 aa6.59□□□□□ -1.35
SFSWAP-202ENST00000535202 TMEM182Q6ZP80 229 aaPredicted RBP6.59□□□□□ -1.35
SFSWAP-202ENST00000535202 OR4D5Q8NGN0 318 aa6.59□□□□□ -1.35
SFSWAP-202ENST00000535202 NUDT11Q96G61 164 aa6.59□□□□□ -1.35
SFSWAP-202ENST00000535202 RNF2Q99496 336 aa6.59□□□□□ -1.35
SFSWAP-202ENST00000535202 C11orf1Q9H5F2 150 aa6.59□□□□□ -1.35
SFSWAP-202ENST00000535202 LSM4Q9Y4Z0 139 aaKnown RBP6.59□□□□□ -1.35
SFSWAP-202ENST00000535202 DUXBA0A1W2PPF3 345 aa6.58□□□□□ -1.36
SFSWAP-202ENST00000535202 ZNF705FA8MVS1 300 aaPredicted RBP6.58□□□□□ -1.36
SFSWAP-202ENST00000535202 H7BYZ3 331 aa6.58□□□□□ -1.36
SFSWAP-202ENST00000535202 NDUFB8O95169 186 aa6.58□□□□□ -1.36
SFSWAP-202ENST00000535202 CRYGBP07316 175 aa6.58□□□□□ -1.36
SFSWAP-202ENST00000535202 OR5G3P0C626 314 aa6.58□□□□□ -1.36
SFSWAP-202ENST00000535202 ZNF705DP0CH99 300 aaPredicted RBP6.58□□□□□ -1.36
SFSWAP-202ENST00000535202 ZNF705BP0CI00 300 aaPredicted RBP6.58□□□□□ -1.36
SFSWAP-202ENST00000535202 ATP6V0CP27449 155 aa6.58□□□□□ -1.36
SFSWAP-202ENST00000535202 FHITP49789 147 aa6.58□□□□□ -1.36
SFSWAP-202ENST00000535202 CCL20P78556 96 aa6.58□□□□□ -1.36
SFSWAP-202ENST00000535202 SSBP2P81877 361 aaPredicted RBP6.58□□□□□ -1.36
SFSWAP-202ENST00000535202 PSG3Q16557 428 aa6.58□□□□□ -1.36
SFSWAP-202ENST00000535202 SRSF7Q16629 238 aaKnown RBP eCLIP6.58□□□□□ -1.36
SFSWAP-202ENST00000535202 VMA21Q3ZAQ7 101 aa6.58□□□□□ -1.36
SFSWAP-202ENST00000535202 TMEM177Q53S58 311 aa6.58□□□□□ -1.36
SFSWAP-202ENST00000535202 ETFRF1Q6IPR1 90 aa6.58□□□□□ -1.36
SFSWAP-202ENST00000535202 Q6ZS49 121 aa6.58□□□□□ -1.36
SFSWAP-202ENST00000535202 GVQW1Q8N7I0 195 aa6.58□□□□□ -1.36
SFSWAP-202ENST00000535202 ADTRPQ96IZ2 230 aa6.58□□□□□ -1.36
SFSWAP-202ENST00000535202 CIB3Q96Q77 187 aaPredicted RBP6.58□□□□□ -1.36
SFSWAP-202ENST00000535202 SPIN2AQ99865 258 aa6.58□□□□□ -1.36
SFSWAP-202ENST00000535202 ASCL2Q99929 193 aa6.58□□□□□ -1.36
SFSWAP-202ENST00000535202 SPIN2BQ9BPZ2 258 aa6.58□□□□□ -1.36
SFSWAP-202ENST00000535202 ST6GALNAC5Q9BVH7 336 aa6.58□□□□□ -1.36
SFSWAP-202ENST00000535202 PARD6GQ9BYG4 376 aaPredicted RBP6.58□□□□□ -1.36
SFSWAP-202ENST00000535202 SMIM3Q9BZL3 60 aa6.58□□□□□ -1.36
SFSWAP-202ENST00000535202 BET1LQ9NYM9 111 aa6.58□□□□□ -1.36
SFSWAP-202ENST00000535202 SRRM4A7MD48 611 aaKnown RBP6.57□□□□□ -1.36
SFSWAP-202ENST00000535202 LINC00473A8K010 186 aa6.57□□□□□ -1.36
SFSWAP-202ENST00000535202 H3BUA1 57 aa6.57□□□□□ -1.36
SFSWAP-202ENST00000535202 CTXN2P0C2S0 81 aa6.57□□□□□ -1.36
SFSWAP-202ENST00000535202 NHLRC4P0CG21 123 aaPredicted RBP6.57□□□□□ -1.36
SFSWAP-202ENST00000535202 APELAP0DMC3 54 aa6.57□□□□□ -1.36
SFSWAP-202ENST00000535202 DUTP33316 252 aaKnown RBP6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms