RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 PIP4P2Q8N4L2 257 aa9.21□□□□□ -0.93
AMBRA1-211ENST00000533727 OTORQ9NRC9 128 aa9.21□□□□□ -0.93
AMBRA1-211ENST00000533727 COL4A4P53420 1690 aaPredicted RBP9.21□□□□□ -0.93
AMBRA1-211ENST00000533727 TRBV20OR9-2A0A075B6H5 130 aa9.21□□□□□ -0.93
AMBRA1-211ENST00000533727 TMEM262E9PQX1 116 aa9.21□□□□□ -0.93
AMBRA1-211ENST00000533727 DNAL4O96015 105 aa9.21□□□□□ -0.93
AMBRA1-211ENST00000533727 IGKV3-20P01619 116 aa9.21□□□□□ -0.93
AMBRA1-211ENST00000533727 TFF1P04155 84 aa9.21□□□□□ -0.93
AMBRA1-211ENST00000533727 ORAOV1Q8WV07 137 aa9.21□□□□□ -0.93
AMBRA1-211ENST00000533727 COQ2Q96H96 371 aa9.21□□□□□ -0.93
AMBRA1-211ENST00000533727 C18orf12Q96KH6 178 aa9.21□□□□□ -0.93
AMBRA1-211ENST00000533727 KIF26BQ2KJY2 2108 aa9.21□□□□□ -0.94
AMBRA1-211ENST00000533727 TRAV8-2A0A0B4J237 113 aa9.21□□□□□ -0.94
AMBRA1-211ENST00000533727 CGAP01215 116 aa9.21□□□□□ -0.94
AMBRA1-211ENST00000533727 C15orf32Q32M92 178 aa9.21□□□□□ -0.94
AMBRA1-211ENST00000533727 S4R3C0 116 aa9.21□□□□□ -0.94
AMBRA1-211ENST00000533727 K7EM74 188 aa9.21□□□□□ -0.94
AMBRA1-211ENST00000533727 ZNF56Q15929 161 aa9.21□□□□□ -0.94
AMBRA1-211ENST00000533727 CIARTQ8N365 385 aaPredicted RBP9.21□□□□□ -0.94
AMBRA1-211ENST00000533727 FMC1Q96HJ9 113 aa9.21□□□□□ -0.94
AMBRA1-211ENST00000533727 ASCL2Q99929 193 aa9.21□□□□□ -0.94
AMBRA1-211ENST00000533727 NHP2Q9NX24 153 aaKnown RBP9.21□□□□□ -0.94
AMBRA1-211ENST00000533727 PGPEP1LA6NFU8 196 aa9.2□□□□□ -0.94
AMBRA1-211ENST00000533727 PRB1P04280 392 aa9.2□□□□□ -0.94
AMBRA1-211ENST00000533727 Q6AWC8 147 aa9.2□□□□□ -0.94
AMBRA1-211ENST00000533727 C2orf16Q68DN1 1984 aa9.2□□□□□ -0.94
AMBRA1-211ENST00000533727 APOMO95445 188 aa9.2□□□□□ -0.94
AMBRA1-211ENST00000533727 TMEM50AO95807 157 aa9.2□□□□□ -0.94
AMBRA1-211ENST00000533727 MRPL52Q86TS9 123 aaKnown RBP9.2□□□□□ -0.94
AMBRA1-211ENST00000533727 DTX2Q86UW9 622 aa9.2□□□□□ -0.94
AMBRA1-211ENST00000533727 C11orf44Q8N8P7 122 aa9.2□□□□□ -0.94
AMBRA1-211ENST00000533727 ST20Q9HBF5 79 aa9.2□□□□□ -0.94
AMBRA1-211ENST00000533727 TRGV11A0A075B6L2 103 aa9.2□□□□□ -0.94
AMBRA1-211ENST00000533727 LINC00311Q8N616 119 aa9.2□□□□□ -0.94
AMBRA1-211ENST00000533727 KIR2DL4Q99706 377 aa9.2□□□□□ -0.94
AMBRA1-211ENST00000533727 PRB3Q04118 309 aaPredicted RBP9.2□□□□□ -0.94
AMBRA1-211ENST00000533727 ZNF585BQ52M93 769 aa9.2□□□□□ -0.94
AMBRA1-211ENST00000533727 SIGLEC9Q9Y336 463 aa9.2□□□□□ -0.94
AMBRA1-211ENST00000533727 TRGV2A0A075B6R0 118 aa9.19□□□□□ -0.94
AMBRA1-211ENST00000533727 A0A0A6YYD4 124 aa9.19□□□□□ -0.94
AMBRA1-211ENST00000533727 A0A1B0GWJ7 208 aa9.19□□□□□ -0.94
AMBRA1-211ENST00000533727 DKK1O94907 266 aa9.19□□□□□ -0.94
AMBRA1-211ENST00000533727 CCL20P78556 96 aa9.19□□□□□ -0.94
AMBRA1-211ENST00000533727 UBE2V1Q13404 147 aa9.19□□□□□ -0.94
AMBRA1-211ENST00000533727 GCSAMLQ5JQS6 135 aa9.19□□□□□ -0.94
AMBRA1-211ENST00000533727 NBASA2RRP1 2371 aa9.19□□□□□ -0.94
AMBRA1-211ENST00000533727 A0A1B0GW15 77 aa9.19□□□□□ -0.94
AMBRA1-211ENST00000533727 H3BTX0 84 aa9.19□□□□□ -0.94
AMBRA1-211ENST00000533727 TFF3Q07654 80 aa9.19□□□□□ -0.94
AMBRA1-211ENST00000533727 IGHV3-66A0A0C4DH42 116 aa9.19□□□□□ -0.94
AMBRA1-211ENST00000533727 SHISA9B4DS77 424 aa9.19□□□□□ -0.94
AMBRA1-211ENST00000533727 PEX7O00628 323 aa9.19□□□□□ -0.94
AMBRA1-211ENST00000533727 TDGF1P3P51864 188 aa9.19□□□□□ -0.94
AMBRA1-211ENST00000533727 FOXC2Q99958 501 aa9.19□□□□□ -0.94
AMBRA1-211ENST00000533727 MRPS16Q9Y3D3 137 aaKnown RBP9.19□□□□□ -0.94
AMBRA1-211ENST00000533727 OR10J3Q5JRS4 329 aa9.19□□□□□ -0.94
AMBRA1-211ENST00000533727 TMEM170BQ5T4T1 132 aa9.19□□□□□ -0.94
AMBRA1-211ENST00000533727 RPP21Q9H633 154 aaKnown RBP9.19□□□□□ -0.94
AMBRA1-211ENST00000533727 ADORA2A-AS1P86434 159 aa9.18□□□□□ -0.94
AMBRA1-211ENST00000533727 ZNF562Q6V9R5 426 aa9.18□□□□□ -0.94
AMBRA1-211ENST00000533727 SIGLEC15Q6ZMC9 328 aa9.18□□□□□ -0.94
AMBRA1-211ENST00000533727 TMEM101Q96IK0 257 aa9.18□□□□□ -0.94
AMBRA1-211ENST00000533727 FREM3P0C091 2139 aa9.18□□□□□ -0.94
AMBRA1-211ENST00000533727 LCNL1Q6ZST4 164 aa9.18□□□□□ -0.94
AMBRA1-211ENST00000533727 TNFRSF18Q9Y5U5 241 aa9.18□□□□□ -0.94
AMBRA1-211ENST00000533727 C9orf139Q6ZV77 190 aa9.18□□□□□ -0.94
AMBRA1-211ENST00000533727 GNB1LQ9BYB4 327 aa9.18□□□□□ -0.94
AMBRA1-211ENST00000533727 SPTBN1Q01082 2364 aaKnown RBP9.18□□□□□ -0.94
AMBRA1-211ENST00000533727 HIGD1CA8MV81 97 aa9.17□□□□□ -0.94
AMBRA1-211ENST00000533727 ID3Q02535 119 aa9.17□□□□□ -0.94
AMBRA1-211ENST00000533727 FHL1Q13642 323 aa9.17□□□□□ -0.94
AMBRA1-211ENST00000533727 DEFB121Q5J5C9 76 aa9.17□□□□□ -0.94
AMBRA1-211ENST00000533727 TRAV21A0A0B4J279 112 aa9.17□□□□□ -0.94
AMBRA1-211ENST00000533727 RAMP3O60896 148 aa9.17□□□□□ -0.94
AMBRA1-211ENST00000533727 CKS1BP61024 79 aa9.17□□□□□ -0.94
AMBRA1-211ENST00000533727 HSD52Q0P140 79 aa9.17□□□□□ -0.94
AMBRA1-211ENST00000533727 ORMDL3Q8N138 153 aa9.17□□□□□ -0.94
AMBRA1-211ENST00000533727 OSTCQ9NRP0 149 aa9.17□□□□□ -0.94
AMBRA1-211ENST00000533727 CYSLTR1Q9Y271 337 aa9.17□□□□□ -0.94
AMBRA1-211ENST00000533727 A0A1W2PNU3 283 aaPredicted RBP9.17□□□□□ -0.94
AMBRA1-211ENST00000533727 IGHV2-5P01817 119 aa9.17□□□□□ -0.94
AMBRA1-211ENST00000533727 LOXP28300 417 aaPredicted RBP9.17□□□□□ -0.94
AMBRA1-211ENST00000533727 MEIG1Q5JSS6 88 aa9.17□□□□□ -0.94
AMBRA1-211ENST00000533727 Q6ZR03 302 aa9.17□□□□□ -0.94
AMBRA1-211ENST00000533727 ZNF664Q8N3J9 261 aa9.17□□□□□ -0.94
AMBRA1-211ENST00000533727 FAM110DQ8TAY7 271 aaPredicted RBP9.17□□□□□ -0.94
AMBRA1-211ENST00000533727 TRGV9Q99603 122 aa9.17□□□□□ -0.94
AMBRA1-211ENST00000533727 SSBP4Q9BWG4 385 aaPredicted RBP9.17□□□□□ -0.94
AMBRA1-211ENST00000533727 PLAURQ03405 335 aa9.17□□□□□ -0.94
AMBRA1-211ENST00000533727 LCN12Q6JVE5 192 aa9.17□□□□□ -0.94
AMBRA1-211ENST00000533727 A0A1B0GW64 132 aa9.16□□□□□ -0.94
AMBRA1-211ENST00000533727 LHFPL1Q86WI0 220 aa9.16□□□□□ -0.94
AMBRA1-211ENST00000533727 HEATR1Q9H583 2144 aaKnown RBP9.16□□□□□ -0.94
AMBRA1-211ENST00000533727 LINC00527Q9UJ94 153 aa9.16□□□□□ -0.94
AMBRA1-211ENST00000533727 ZNF479Q96JC4 524 aa9.16□□□□□ -0.94
AMBRA1-211ENST00000533727 MS4A6AQ9H2W1 248 aa9.16□□□□□ -0.94
AMBRA1-211ENST00000533727 GEMIN7Q9H840 131 aaKnown RBP9.16□□□□□ -0.94
AMBRA1-211ENST00000533727 AKAP6Q13023 2319 aa9.16□□□□□ -0.94
AMBRA1-211ENST00000533727 SAMD5Q5TGI4 173 aa9.16□□□□□ -0.94
AMBRA1-211ENST00000533727 RNASE7Q9H1E1 156 aaKnown RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms