RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 EP300Q09472 2414 aaPredicted RBP13.27□□□□□ -0.28
CTSB-228ENST00000533455 TRBV6-1A0A0K0K1D8 114 aa13.27□□□□□ -0.28
CTSB-228ENST00000533455 SPAARA0A1B0GVQ0 90 aa13.27□□□□□ -0.28
CTSB-228ENST00000533455 OR5AL1P0C617 328 aa13.27□□□□□ -0.28
CTSB-228ENST00000533455 FAM87AP0C7U9 286 aa13.27□□□□□ -0.28
CTSB-228ENST00000533455 FOXA3P55318 350 aaPredicted RBP13.27□□□□□ -0.28
CTSB-228ENST00000533455 TMEM155Q4W5P6 130 aa13.27□□□□□ -0.28
CTSB-228ENST00000533455 LEMD1Q68G75 181 aa13.27□□□□□ -0.28
CTSB-228ENST00000533455 ASCL5Q7RTU5 278 aa13.27□□□□□ -0.28
CTSB-228ENST00000533455 TMEM190Q8WZ59 177 aa13.27□□□□□ -0.28
CTSB-228ENST00000533455 TMEM14CQ9P0S9 112 aa13.27□□□□□ -0.28
CTSB-228ENST00000533455 CTSZQ9UBR2 303 aa13.27□□□□□ -0.28
CTSB-228ENST00000533455 LEPROTL1O95214 131 aa13.27□□□□□ -0.29
CTSB-228ENST00000533455 HOXB4P17483 251 aaPredicted RBP13.27□□□□□ -0.29
CTSB-228ENST00000533455 FAM57AQ8TBR7 257 aa13.27□□□□□ -0.29
CTSB-228ENST00000533455 SPENQ96T58 3664 aaKnown RBP13.27□□□□□ -0.29
CTSB-228ENST00000533455 M0QZ24 198 aa13.26□□□□□ -0.29
CTSB-228ENST00000533455 HAX1O00165 279 aa13.26□□□□□ -0.29
CTSB-228ENST00000533455 APOHP02749 345 aaPredicted RBP13.26□□□□□ -0.29
CTSB-228ENST00000533455 LHFPL4Q7Z7J7 247 aa13.26□□□□□ -0.29
CTSB-228ENST00000533455 HIGD1AQ9Y241 93 aa13.26□□□□□ -0.29
CTSB-228ENST00000533455 LIPFP07098 398 aa13.25□□□□□ -0.29
CTSB-228ENST00000533455 IGHV1-8P0DP01 117 aa13.25□□□□□ -0.29
CTSB-228ENST00000533455 PRR31Q5SQ13 230 aa13.25□□□□□ -0.29
CTSB-228ENST00000533455 LINC00173Q6ZV60 143 aa13.25□□□□□ -0.29
CTSB-228ENST00000533455 Q6ZVH6 145 aa13.25□□□□□ -0.29
CTSB-228ENST00000533455 TMEM191AQ9H0A3 160 aa13.25□□□□□ -0.29
CTSB-228ENST00000533455 KAAG1Q9UBP8 84 aa13.25□□□□□ -0.29
CTSB-228ENST00000533455 PLXNB1O43157 2135 aa13.25□□□□□ -0.29
CTSB-228ENST00000533455 OVOL3O00110 214 aa13.25□□□□□ -0.29
CTSB-228ENST00000533455 CHEK1O14757 476 aa13.25□□□□□ -0.29
CTSB-228ENST00000533455 ENSAO43768 121 aaKnown RBP13.25□□□□□ -0.29
CTSB-228ENST00000533455 CD24P25063 80 aa13.25□□□□□ -0.29
CTSB-228ENST00000533455 PET117Q6UWS5 81 aa13.25□□□□□ -0.29
CTSB-228ENST00000533455 ZNF835Q9Y2P0 537 aa13.25□□□□□ -0.29
CTSB-228ENST00000533455 F11RQ9Y624 299 aaKnown RBP13.25□□□□□ -0.29
CTSB-228ENST00000533455 K7EP13 123 aa13.24□□□□□ -0.29
CTSB-228ENST00000533455 IGLV2-11P01706 119 aa13.24□□□□□ -0.29
CTSB-228ENST00000533455 GATD1Q8NB37 220 aa13.24□□□□□ -0.29
CTSB-228ENST00000533455 TNFRSF14Q92956 283 aa13.24□□□□□ -0.29
CTSB-228ENST00000533455 TMEM133Q9H2Q1 129 aa13.24□□□□□ -0.29
CTSB-228ENST00000533455 IGHV2-70DA0A0C4DH43 119 aa13.23□□□□□ -0.29
CTSB-228ENST00000533455 H3BTX0 84 aa13.23□□□□□ -0.29
CTSB-228ENST00000533455 COL8A1P27658 744 aa13.23□□□□□ -0.29
CTSB-228ENST00000533455 WFDC8Q8IUA0 241 aa13.23□□□□□ -0.29
CTSB-228ENST00000533455 SIGLEC9Q9Y336 463 aa13.23□□□□□ -0.29
CTSB-228ENST00000533455 ZNF318Q5VUA4 2279 aa13.23□□□□□ -0.29
CTSB-228ENST00000533455 IGHV3-72A0A0B4J1Y9 119 aa13.23□□□□□ -0.29
CTSB-228ENST00000533455 C16orf97H3BN30 126 aa13.23□□□□□ -0.29
CTSB-228ENST00000533455 IGLC1P0CG04 106 aa13.23□□□□□ -0.29
CTSB-228ENST00000533455 FBLN7Q53RD9 439 aa13.23□□□□□ -0.29
CTSB-228ENST00000533455 CCL17Q92583 94 aa13.23□□□□□ -0.29
CTSB-228ENST00000533455 LOC400499M0QZD8 3231 aa13.23□□□□□ -0.29
CTSB-228ENST00000533455 OTOGLQ3ZCN5 2332 aa13.22□□□□□ -0.29
CTSB-228ENST00000533455 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.22□□□□□ -0.29
CTSB-228ENST00000533455 hDV102S1A0JD36 115 aa13.22□□□□□ -0.29
CTSB-228ENST00000533455 TEX22C9J3V5 150 aa13.22□□□□□ -0.29
CTSB-228ENST00000533455 BSPH1Q075Z2 132 aa13.22□□□□□ -0.29
CTSB-228ENST00000533455 SLC25A34Q6PIV7 304 aa13.22□□□□□ -0.29
CTSB-228ENST00000533455 CIARTQ8N365 385 aaPredicted RBP13.22□□□□□ -0.29
CTSB-228ENST00000533455 MAP1LC3CQ9BXW4 147 aa13.22□□□□□ -0.29
CTSB-228ENST00000533455 SLC25A39Q9BZJ4 359 aaPredicted RBP13.22□□□□□ -0.29
CTSB-228ENST00000533455 CUL9Q8IWT3 2517 aa13.22□□□□□ -0.29
CTSB-228ENST00000533455 LOC105371242A0A075B767 164 aa13.22□□□□□ -0.29
CTSB-228ENST00000533455 IGHV3-21A0A0B4J1V1 117 aa13.22□□□□□ -0.29
CTSB-228ENST00000533455 HLA-DRB1P01911 266 aa13.22□□□□□ -0.29
CTSB-228ENST00000533455 THBDP07204 575 aa13.22□□□□□ -0.29
CTSB-228ENST00000533455 PSG1P11464 419 aa13.22□□□□□ -0.29
CTSB-228ENST00000533455 CNTFRP26992 372 aa13.22□□□□□ -0.29
CTSB-228ENST00000533455 MS4A6AQ9H2W1 248 aa13.22□□□□□ -0.29
CTSB-228ENST00000533455 SCRT2Q9NQ03 307 aa13.22□□□□□ -0.29
CTSB-228ENST00000533455 HSPB8Q9UJY1 196 aa13.22□□□□□ -0.29
CTSB-228ENST00000533455 TRAV8-1A0A0A6YYK1 113 aa13.21□□□□□ -0.29
CTSB-228ENST00000533455 HSBP1L1C9JCN9 74 aa13.21□□□□□ -0.29
CTSB-228ENST00000533455 LYZP61626 148 aa13.21□□□□□ -0.29
CTSB-228ENST00000533455 RBPJQ06330 500 aa13.21□□□□□ -0.29
CTSB-228ENST00000533455 RNASE8Q8TDE3 154 aaKnown RBP13.21□□□□□ -0.29
CTSB-228ENST00000533455 GSX1Q9H4S2 264 aaPredicted RBP13.21□□□□□ -0.29
CTSB-228ENST00000533455 MPV17L2Q567V2 206 aa13.2□□□□□ -0.3
CTSB-228ENST00000533455 GOLT1AQ6ZVE7 132 aa13.2□□□□□ -0.3
CTSB-228ENST00000533455 PRNTQ86SH4 94 aa13.2□□□□□ -0.3
CTSB-228ENST00000533455 TMEM75Q8N9X5 138 aa13.2□□□□□ -0.3
CTSB-228ENST00000533455 TRAV30A0A087WSZ9 112 aa13.2□□□□□ -0.3
CTSB-228ENST00000533455 A0A0G2JNJ9 132 aa13.2□□□□□ -0.3
CTSB-228ENST00000533455 ZNF785A8K8V0 405 aa13.2□□□□□ -0.3
CTSB-228ENST00000533455 I3L2K1 104 aa13.2□□□□□ -0.3
CTSB-228ENST00000533455 IGLV1-47P01700 117 aa13.2□□□□□ -0.3
CTSB-228ENST00000533455 RBX1P62877 108 aa13.2□□□□□ -0.3
CTSB-228ENST00000533455 BVES-AS1Q5T3Y7 98 aa13.2□□□□□ -0.3
CTSB-228ENST00000533455 PPP1R27Q86WC6 154 aa13.2□□□□□ -0.3
CTSB-228ENST00000533455 TP73-AS1Q9UF72 201 aa13.2□□□□□ -0.3
CTSB-228ENST00000533455 Q9UFV3 132 aa13.2□□□□□ -0.3
CTSB-228ENST00000533455 A0A1B0GUT8 65 aa13.19□□□□□ -0.3
CTSB-228ENST00000533455 APELAP0DMC3 54 aa13.19□□□□□ -0.3
CTSB-228ENST00000533455 RIGQ13278 110 aa13.19□□□□□ -0.3
CTSB-228ENST00000533455 LINC01545Q5VT33 79 aa13.19□□□□□ -0.3
CTSB-228ENST00000533455 EXOC3-AS1Q8N2X6 119 aa13.19□□□□□ -0.3
CTSB-228ENST00000533455 RNASE6Q93091 150 aaKnown RBP13.19□□□□□ -0.3
CTSB-228ENST00000533455 TMUB1Q9BVT8 246 aa13.19□□□□□ -0.3
CTSB-228ENST00000533455 IGHV1-3A0A0C4DH29 117 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms