RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 MS4A6AQ9H2W1 248 aa8.94□□□□□ -0.98
SSBP3-214ENST00000533209 TRAV2A0A0B4J234 112 aa8.93□□□□□ -0.98
SSBP3-214ENST00000533209 UBE2L5PA0A1B0GUS4 154 aa8.93□□□□□ -0.98
SSBP3-214ENST00000533209 LINC00869P0C866 280 aa8.93□□□□□ -0.98
SSBP3-214ENST00000533209 ORM2P19652 201 aa8.93□□□□□ -0.98
SSBP3-214ENST00000533209 RPL11P62913 178 aaKnown RBP8.93□□□□□ -0.98
SSBP3-214ENST00000533209 ODF3L2Q3SX64 289 aa8.93□□□□□ -0.98
SSBP3-214ENST00000533209 Q5BKY6 102 aa8.93□□□□□ -0.98
SSBP3-214ENST00000533209 ZNF546Q86UE3 836 aa8.93□□□□□ -0.98
SSBP3-214ENST00000533209 OR5C1Q8NGR4 320 aa8.93□□□□□ -0.98
SSBP3-214ENST00000533209 ASB13Q8WXK3 278 aa8.93□□□□□ -0.98
SSBP3-214ENST00000533209 PFDN2Q9UHV9 154 aa8.93□□□□□ -0.98
SSBP3-214ENST00000533209 HELTA6NFD8 242 aa8.92□□□□□ -0.98
SSBP3-214ENST00000533209 K7EQG2 157 aa8.92□□□□□ -0.98
SSBP3-214ENST00000533209 DNASE2O00115 360 aaPredicted RBP8.92□□□□□ -0.98
SSBP3-214ENST00000533209 RPL12P30050 165 aaKnown RBP8.92□□□□□ -0.98
SSBP3-214ENST00000533209 CAMLGP49069 296 aa8.92□□□□□ -0.98
SSBP3-214ENST00000533209 RAP2BP61225 183 aa8.92□□□□□ -0.98
SSBP3-214ENST00000533209 PAFAH1B2P68402 229 aa8.92□□□□□ -0.98
SSBP3-214ENST00000533209 C1orf194Q5T5A4 169 aa8.92□□□□□ -0.98
SSBP3-214ENST00000533209 PATE2Q6UY27 113 aa8.92□□□□□ -0.98
SSBP3-214ENST00000533209 LINC00322Q6ZN03 302 aaPredicted RBP8.92□□□□□ -0.98
SSBP3-214ENST00000533209 WFDC3Q8IUB2 231 aa8.92□□□□□ -0.98
SSBP3-214ENST00000533209 FAM24BQ8N5W8 94 aa8.92□□□□□ -0.98
SSBP3-214ENST00000533209 STXBP6Q8NFX7 210 aa8.92□□□□□ -0.98
SSBP3-214ENST00000533209 OR1B1Q8NGR6 318 aa8.92□□□□□ -0.98
SSBP3-214ENST00000533209 THAP6Q8TBB0 222 aa8.92□□□□□ -0.98
SSBP3-214ENST00000533209 DCANP1Q8TF63 244 aa8.92□□□□□ -0.98
SSBP3-214ENST00000533209 CHAC2Q8WUX2 184 aa8.92□□□□□ -0.98
SSBP3-214ENST00000533209 PPP1R14BQ96C90 147 aa8.92□□□□□ -0.98
SSBP3-214ENST00000533209 CITED4Q96RK1 184 aa8.92□□□□□ -0.98
SSBP3-214ENST00000533209 FAM110AQ9BQ89 295 aa8.92□□□□□ -0.98
SSBP3-214ENST00000533209 GGTLC1Q9BX51 225 aa8.92□□□□□ -0.98
SSBP3-214ENST00000533209 TUBA4BQ9H853 241 aa8.92□□□□□ -0.98
SSBP3-214ENST00000533209 SRD5A3Q9H8P0 318 aa8.92□□□□□ -0.98
SSBP3-214ENST00000533209 DOK5Q9P104 306 aa8.92□□□□□ -0.98
SSBP3-214ENST00000533209 UBQLN2Q9UHD9 624 aa8.92□□□□□ -0.98
SSBP3-214ENST00000533209 HSPB11Q9Y547 144 aa8.92□□□□□ -0.98
SSBP3-214ENST00000533209 COL7A1Q02388 2944 aa8.92□□□□□ -0.98
SSBP3-214ENST00000533209 RBMY1BA6NDE4 496 aaKnown RBP8.91□□□□□ -0.98
SSBP3-214ENST00000533209 RBMY1EA6NEQ0 496 aaKnown RBP8.91□□□□□ -0.98
SSBP3-214ENST00000533209 ZNF98A6NK75 572 aa8.91□□□□□ -0.98
SSBP3-214ENST00000533209 H3BRN7 92 aa8.91□□□□□ -0.98
SSBP3-214ENST00000533209 HYPMO75409 117 aa8.91□□□□□ -0.98
SSBP3-214ENST00000533209 RBMY1DP0C7P1 496 aaKnown RBP8.91□□□□□ -0.98
SSBP3-214ENST00000533209 FGF7P21781 194 aa8.91□□□□□ -0.98
SSBP3-214ENST00000533209 AP2S1P53680 142 aaPredicted RBP8.91□□□□□ -0.98
SSBP3-214ENST00000533209 PRR20EP86478 221 aa8.91□□□□□ -0.98
SSBP3-214ENST00000533209 PRR20CP86479 221 aa8.91□□□□□ -0.98
SSBP3-214ENST00000533209 PRR20DP86480 221 aa8.91□□□□□ -0.98
SSBP3-214ENST00000533209 PRR20BP86481 221 aa8.91□□□□□ -0.98
SSBP3-214ENST00000533209 PRR20AP86496 221 aa8.91□□□□□ -0.98
SSBP3-214ENST00000533209 RAB31Q13636 194 aa8.91□□□□□ -0.98
SSBP3-214ENST00000533209 CLINT1Q14677 625 aa8.91□□□□□ -0.98
SSBP3-214ENST00000533209 OPCMLQ14982 345 aa8.91□□□□□ -0.98
SSBP3-214ENST00000533209 SIGLEC15Q6ZMC9 328 aa8.91□□□□□ -0.98
SSBP3-214ENST00000533209 SBSPONQ8IVN8 264 aa8.91□□□□□ -0.98
SSBP3-214ENST00000533209 ASCL2Q99929 193 aa8.91□□□□□ -0.98
SSBP3-214ENST00000533209 SLC25A39Q9BZJ4 359 aaPredicted RBP8.91□□□□□ -0.98
SSBP3-214ENST00000533209 MAP6D1Q9H9H5 199 aa8.91□□□□□ -0.98
SSBP3-214ENST00000533209 HIGD1AQ9Y241 93 aa8.91□□□□□ -0.98
SSBP3-214ENST00000533209 MPDU1O75352 247 aa8.9□□□□□ -0.98
SSBP3-214ENST00000533209 OR5G3P0C626 314 aa8.9□□□□□ -0.98
SSBP3-214ENST00000533209 RPL29P47914 159 aaKnown RBP8.9□□□□□ -0.98
SSBP3-214ENST00000533209 FGL1Q08830 312 aa8.9□□□□□ -0.98
SSBP3-214ENST00000533209 PXDC1Q5TGL8 231 aa8.9□□□□□ -0.98
SSBP3-214ENST00000533209 MIC13Q5XKP0 118 aa8.9□□□□□ -0.98
SSBP3-214ENST00000533209 UHRF2Q96PU4 802 aa8.9□□□□□ -0.98
SSBP3-214ENST00000533209 SHANK2-AS3Q9BTD1 123 aa8.9□□□□□ -0.98
SSBP3-214ENST00000533209 SCRT1Q9BWW7 348 aa8.9□□□□□ -0.98
SSBP3-214ENST00000533209 ARL6Q9H0F7 186 aa8.9□□□□□ -0.98
SSBP3-214ENST00000533209 SLC25A22Q9H936 323 aa8.9□□□□□ -0.98
SSBP3-214ENST00000533209 NRN1Q9NPD7 142 aa8.9□□□□□ -0.98
SSBP3-214ENST00000533209 FBXL17Q9UF56 701 aa8.9□□□□□ -0.98
SSBP3-214ENST00000533209 G3V3Q6 166 aa8.89□□□□□ -0.99
SSBP3-214ENST00000533209 S100A7P31151 101 aa8.89□□□□□ -0.99
SSBP3-214ENST00000533209 CMC4P56277 68 aaPredicted RBP8.89□□□□□ -0.99
SSBP3-214ENST00000533209 ZNF124Q15973 351 aa8.89□□□□□ -0.99
SSBP3-214ENST00000533209 LEMD1Q68G75 181 aa8.89□□□□□ -0.99
SSBP3-214ENST00000533209 APRG1Q8IVJ8 170 aa8.89□□□□□ -0.99
SSBP3-214ENST00000533209 OR8I2Q8N0Y5 310 aa8.89□□□□□ -0.99
SSBP3-214ENST00000533209 OR2T35Q8NGX2 323 aa8.89□□□□□ -0.99
SSBP3-214ENST00000533209 TMEM37Q8WXS4 190 aa8.89□□□□□ -0.99
SSBP3-214ENST00000533209 C17orf77Q96MU5 243 aa8.89□□□□□ -0.99
SSBP3-214ENST00000533209 ATP5SQ99766 215 aa8.89□□□□□ -0.99
SSBP3-214ENST00000533209 NPCDR1Q9BY65 106 aa8.89□□□□□ -0.99
SSBP3-214ENST00000533209 SMIM3Q9BZL3 60 aa8.89□□□□□ -0.99
SSBP3-214ENST00000533209 WDR61Q9GZS3 305 aaKnown RBP8.89□□□□□ -0.99
SSBP3-214ENST00000533209 ARV1Q9H2C2 271 aa8.89□□□□□ -0.99
SSBP3-214ENST00000533209 SLC25A32Q9H2D1 315 aa8.89□□□□□ -0.99
SSBP3-214ENST00000533209 WFDC1Q9HC57 220 aa8.89□□□□□ -0.99
SSBP3-214ENST00000533209 SLC39A9Q9NUM3 307 aa8.89□□□□□ -0.99
SSBP3-214ENST00000533209 COX7A2P2O60397 106 aa8.88□□□□□ -0.99
SSBP3-214ENST00000533209 NHLRC4P0CG21 123 aaPredicted RBP8.88□□□□□ -0.99
SSBP3-214ENST00000533209 DEFB131AP59861 70 aa8.88□□□□□ -0.99
SSBP3-214ENST00000533209 B2MP61769 119 aa8.88□□□□□ -0.99
SSBP3-214ENST00000533209 HAGHQ16775 308 aa8.88□□□□□ -0.99
SSBP3-214ENST00000533209 GPR82Q96P67 336 aa8.88□□□□□ -0.99
SSBP3-214ENST00000533209 AQP10Q96PS8 301 aa8.88□□□□□ -0.99
SSBP3-214ENST00000533209 PXMP4Q9Y6I8 212 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms