RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 AP2S1P53680 142 aaPredicted RBP11.35□□□□□ -0.59
CPSF1-210ENST00000532935 DEFB131AP59861 70 aa11.35□□□□□ -0.59
CPSF1-210ENST00000532935 OR2F1Q13607 317 aa11.35□□□□□ -0.59
CPSF1-210ENST00000532935 OR8G2PQ6IF36 304 aa11.35□□□□□ -0.59
CPSF1-210ENST00000532935 ACOT7LQ6ZUV0 252 aa11.35□□□□□ -0.59
CPSF1-210ENST00000532935 KIR2DL5AQ8N109 375 aa11.35□□□□□ -0.59
CPSF1-210ENST00000532935 KIR2DL5BQ8NHK3 375 aa11.35□□□□□ -0.59
CPSF1-210ENST00000532935 DCANP1Q8TF63 244 aa11.35□□□□□ -0.59
CPSF1-210ENST00000532935 RAB40CQ96S21 281 aa11.35□□□□□ -0.59
CPSF1-210ENST00000532935 RCL1Q9Y2P8 373 aaKnown RBP11.35□□□□□ -0.59
CPSF1-210ENST00000532935 PMS2P5A8MQ11 134 aa11.34□□□□□ -0.59
CPSF1-210ENST00000532935 FAM25EA8MYX2 175 aa11.34□□□□□ -0.59
CPSF1-210ENST00000532935 SMLR1H3BR10 107 aa11.34□□□□□ -0.59
CPSF1-210ENST00000532935 MBPP02686 304 aaPredicted RBP11.34□□□□□ -0.59
CPSF1-210ENST00000532935 PET100P0DJ07 73 aa11.34□□□□□ -0.59
CPSF1-210ENST00000532935 LYL1P12980 280 aa11.34□□□□□ -0.59
CPSF1-210ENST00000532935 NUP62P37198 522 aaPredicted RBP11.34□□□□□ -0.59
CPSF1-210ENST00000532935 TAS2R30P59541 319 aa11.34□□□□□ -0.59
CPSF1-210ENST00000532935 LYZP61626 148 aa11.34□□□□□ -0.59
CPSF1-210ENST00000532935 AKR1C1Q04828 323 aa11.34□□□□□ -0.59
CPSF1-210ENST00000532935 IL15RAQ13261 267 aa11.34□□□□□ -0.59
CPSF1-210ENST00000532935 LEMD1Q68G75 181 aa11.34□□□□□ -0.59
CPSF1-210ENST00000532935 TMEM14EPQ6UXP3 125 aa11.34□□□□□ -0.59
CPSF1-210ENST00000532935 Q6ZWC4 215 aa11.34□□□□□ -0.59
CPSF1-210ENST00000532935 C9orf62Q8N4C0 152 aa11.34□□□□□ -0.59
CPSF1-210ENST00000532935 STPG3Q8N7X2 389 aa11.34□□□□□ -0.59
CPSF1-210ENST00000532935 OR11H4Q8NGC9 324 aa11.34□□□□□ -0.59
CPSF1-210ENST00000532935 PFDN2Q9UHV9 154 aa11.34□□□□□ -0.59
CPSF1-210ENST00000532935 DYNC2H1Q8NCM8 4307 aaKnown RBP11.34□□□□□ -0.59
CPSF1-210ENST00000532935 TSC22D2O75157 780 aa11.33□□□□□ -0.6
CPSF1-210ENST00000532935 METTL15P1P0C7V9 234 aa11.33□□□□□ -0.6
CPSF1-210ENST00000532935 DEFB135Q30KP9 77 aa11.33□□□□□ -0.6
CPSF1-210ENST00000532935 SIGLEC15Q6ZMC9 328 aa11.33□□□□□ -0.6
CPSF1-210ENST00000532935 TMEM144Q7Z5S9 345 aa11.33□□□□□ -0.6
CPSF1-210ENST00000532935 THAP6Q8TBB0 222 aa11.33□□□□□ -0.6
CPSF1-210ENST00000532935 PPP1R1CQ8WVI7 109 aa11.33□□□□□ -0.6
CPSF1-210ENST00000532935 TP53TG1Q9Y2A0 90 aa11.33□□□□□ -0.6
CPSF1-210ENST00000532935 TENM2Q9NT68 2774 aa11.32□□□□□ -0.6
CPSF1-210ENST00000532935 SMCO3A2RU48 225 aa11.32□□□□□ -0.6
CPSF1-210ENST00000532935 MPC2O95563 127 aa11.32□□□□□ -0.6
CPSF1-210ENST00000532935 CFDP00746 253 aaPredicted RBP11.32□□□□□ -0.6
CPSF1-210ENST00000532935 ZNF688P0C7X2 276 aa11.32□□□□□ -0.6
CPSF1-210ENST00000532935 Q5BKY6 102 aa11.32□□□□□ -0.6
CPSF1-210ENST00000532935 CASC10Q5T4H9 136 aa11.32□□□□□ -0.6
CPSF1-210ENST00000532935 NRN1Q9NPD7 142 aa11.32□□□□□ -0.6
CPSF1-210ENST00000532935 HSPB11Q9Y547 144 aa11.32□□□□□ -0.6
CPSF1-210ENST00000532935 RYR3Q15413 4870 aa11.32□□□□□ -0.6
CPSF1-210ENST00000532935 LYSTQ99698 3801 aa11.31□□□□□ -0.6
CPSF1-210ENST00000532935 A0A0D9SG52 128 aa11.31□□□□□ -0.6
CPSF1-210ENST00000532935 K7EPK0 472 aa11.31□□□□□ -0.6
CPSF1-210ENST00000532935 SPRY2O43597 315 aa11.31□□□□□ -0.6
CPSF1-210ENST00000532935 DLK1P80370 383 aa11.31□□□□□ -0.6
CPSF1-210ENST00000532935 ZNF345Q14585 488 aa11.31□□□□□ -0.6
CPSF1-210ENST00000532935 LGALSLQ3ZCW2 172 aaPredicted RBP11.31□□□□□ -0.6
CPSF1-210ENST00000532935 BPIFCQ8NFQ6 507 aa11.31□□□□□ -0.6
CPSF1-210ENST00000532935 OR10P1Q8NGE3 313 aa11.31□□□□□ -0.6
CPSF1-210ENST00000532935 RNF183Q96D59 192 aa11.31□□□□□ -0.6
CPSF1-210ENST00000532935 CSTL1Q9H114 145 aa11.31□□□□□ -0.6
CPSF1-210ENST00000532935 LSM5Q9Y4Y9 91 aaKnown RBP11.31□□□□□ -0.6
CPSF1-210ENST00000532935 FNDC10F2Z333 226 aa11.3□□□□□ -0.6
CPSF1-210ENST00000532935 L7N2F9 121 aa11.3□□□□□ -0.6
CPSF1-210ENST00000532935 RGS13O14921 159 aa11.3□□□□□ -0.6
CPSF1-210ENST00000532935 RLN2P04090 185 aa11.3□□□□□ -0.6
CPSF1-210ENST00000532935 GATA2P23769 480 aaPredicted RBP11.3□□□□□ -0.6
CPSF1-210ENST00000532935 VAMP2P63027 116 aa11.3□□□□□ -0.6
CPSF1-210ENST00000532935 C1orf194Q5T5A4 169 aa11.3□□□□□ -0.6
CPSF1-210ENST00000532935 ZFAND6Q6FIF0 208 aa11.3□□□□□ -0.6
CPSF1-210ENST00000532935 TMEM182Q6ZP80 229 aaPredicted RBP11.3□□□□□ -0.6
CPSF1-210ENST00000532935 ZNF546Q86UE3 836 aa11.3□□□□□ -0.6
CPSF1-210ENST00000532935 STHQ8IWL8 128 aa11.3□□□□□ -0.6
CPSF1-210ENST00000532935 FBXL17Q9UF56 701 aa11.3□□□□□ -0.6
CPSF1-210ENST00000532935 ARL16Q0P5N6 197 aa11.29□□□□□ -0.6
CPSF1-210ENST00000532935 PSMG4Q5JS54 123 aa11.29□□□□□ -0.6
CPSF1-210ENST00000532935 CYP2G1PQ6ZSU1 146 aa11.29□□□□□ -0.6
CPSF1-210ENST00000532935 NPVFQ9HCQ7 196 aa11.29□□□□□ -0.6
CPSF1-210ENST00000532935 SEPSECSQ9HD40 501 aaKnown RBP11.29□□□□□ -0.6
CPSF1-210ENST00000532935 SLC45A2Q9UMX9 530 aa11.29□□□□□ -0.6
CPSF1-210ENST00000532935 TNFSF18Q9UNG2 199 aa11.29□□□□□ -0.6
CPSF1-210ENST00000532935 SACSQ9NZJ4 4579 aa11.28□□□□□ -0.6
CPSF1-210ENST00000532935 FXYD6-FXYD2A0A087WZ82 144 aa11.28□□□□□ -0.6
CPSF1-210ENST00000532935 KNCNA6PVL3 124 aa11.28□□□□□ -0.6
CPSF1-210ENST00000532935 ORM2P19652 201 aa11.28□□□□□ -0.6
CPSF1-210ENST00000532935 SNRPD3P62318 126 aaKnown RBP11.28□□□□□ -0.6
CPSF1-210ENST00000532935 OR8I2Q8N0Y5 310 aa11.28□□□□□ -0.6
CPSF1-210ENST00000532935 INO80EQ8NBZ0 244 aaPredicted RBP11.28□□□□□ -0.6
CPSF1-210ENST00000532935 RNF126Q9BV68 326 aa11.28□□□□□ -0.6
CPSF1-210ENST00000532935 MFFQ9GZY8 342 aa11.28□□□□□ -0.6
CPSF1-210ENST00000532935 C11orf1Q9H5F2 150 aa11.28□□□□□ -0.6
CPSF1-210ENST00000532935 ARPC5O15511 151 aa11.27□□□□□ -0.61
CPSF1-210ENST00000532935 DEDDO75618 318 aa11.27□□□□□ -0.61
CPSF1-210ENST00000532935 CA1P00915 261 aaPredicted RBP11.27□□□□□ -0.61
CPSF1-210ENST00000532935 S100A11P31949 105 aa11.27□□□□□ -0.61
CPSF1-210ENST00000532935 S100A10P60903 97 aa11.27□□□□□ -0.61
CPSF1-210ENST00000532935 ACTL10Q5JWF8 245 aa11.27□□□□□ -0.61
CPSF1-210ENST00000532935 TEPPQ6URK8 271 aa11.27□□□□□ -0.61
CPSF1-210ENST00000532935 TRPT1Q86TN4 253 aaKnown RBP11.27□□□□□ -0.61
CPSF1-210ENST00000532935 KCNRGQ8N5I3 272 aa11.27□□□□□ -0.61
CPSF1-210ENST00000532935 OR1B1Q8NGR6 318 aa11.27□□□□□ -0.61
CPSF1-210ENST00000532935 IL17DQ8TAD2 202 aa11.27□□□□□ -0.61
CPSF1-210ENST00000532935 TMEM147Q9BVK8 224 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms