RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 FAM214BQ7L5A3 538 aa5.61□□□□□ -1.51
TGFBR3-209ENST00000532540 SH2D6Q7Z4S9 175 aa5.61□□□□□ -1.51
TGFBR3-209ENST00000532540 ZCCHC24Q8N2G6 241 aaKnown RBP5.61□□□□□ -1.51
TGFBR3-209ENST00000532540 RFESDQ8TAC1 157 aa5.61□□□□□ -1.51
TGFBR3-209ENST00000532540 H1FXQ92522 213 aaKnown RBP5.61□□□□□ -1.51
TGFBR3-209ENST00000532540 C1QTNF5Q9BXJ0 243 aa5.61□□□□□ -1.51
TGFBR3-209ENST00000532540 ZNF581Q9P0T4 197 aa5.61□□□□□ -1.51
TGFBR3-209ENST00000532540 PCNX3Q9H6A9 2034 aa5.6□□□□□ -1.51
TGFBR3-209ENST00000532540 SPRY3O43610 288 aa5.6□□□□□ -1.51
TGFBR3-209ENST00000532540 OR2J3O76001 311 aa5.6□□□□□ -1.51
TGFBR3-209ENST00000532540 CELA3BP08861 270 aa5.6□□□□□ -1.51
TGFBR3-209ENST00000532540 Q6ZRM9 215 aa5.6□□□□□ -1.51
TGFBR3-209ENST00000532540 Q6ZS92 163 aa5.6□□□□□ -1.51
TGFBR3-209ENST00000532540 TCF24Q7RTU0 167 aa5.6□□□□□ -1.51
TGFBR3-209ENST00000532540 Q8IYB0 196 aa5.6□□□□□ -1.51
TGFBR3-209ENST00000532540 MDS2Q8NDY4 140 aa5.6□□□□□ -1.51
TGFBR3-209ENST00000532540 FLYWCH2Q96CP2 140 aaKnown RBP5.6□□□□□ -1.51
TGFBR3-209ENST00000532540 RNF183Q96D59 192 aa5.6□□□□□ -1.51
TGFBR3-209ENST00000532540 TMUB1Q9BVT8 246 aa5.6□□□□□ -1.51
TGFBR3-209ENST00000532540 PROK2Q9HC23 129 aa5.6□□□□□ -1.51
TGFBR3-209ENST00000532540 TNRC6AQ8NDV7 1962 aaKnown RBP5.6□□□□□ -1.51
TGFBR3-209ENST00000532540 PF4V1P10720 104 aa5.6□□□□□ -1.51
TGFBR3-209ENST00000532540 TWIST1Q15672 202 aa5.6□□□□□ -1.51
TGFBR3-209ENST00000532540 C5orf64Q2M2E5 130 aa5.6□□□□□ -1.51
TGFBR3-209ENST00000532540 RBPMS2Q6ZRY4 209 aaKnown RBP5.6□□□□□ -1.51
TGFBR3-209ENST00000532540 LINC00596Q86U02 117 aa5.6□□□□□ -1.51
TGFBR3-209ENST00000532540 C10orf126Q8N4M7 172 aa5.6□□□□□ -1.51
TGFBR3-209ENST00000532540 OR4F17Q8NGA8 305 aa5.6□□□□□ -1.51
TGFBR3-209ENST00000532540 MYOZ3Q8TDC0 251 aa5.6□□□□□ -1.51
TGFBR3-209ENST00000532540 PLPPR2Q96GM1 343 aa5.6□□□□□ -1.51
TGFBR3-209ENST00000532540 C19orf24Q9BVV8 132 aa5.6□□□□□ -1.51
TGFBR3-209ENST00000532540 ZNF256Q9Y2P7 627 aaPredicted RBP5.6□□□□□ -1.51
TGFBR3-209ENST00000532540 TMEM189A5PLL7 270 aa5.6□□□□□ -1.51
TGFBR3-209ENST00000532540 DEFB108AA8MXU0 73 aa5.6□□□□□ -1.51
TGFBR3-209ENST00000532540 H3BMG7 143 aa5.6□□□□□ -1.51
TGFBR3-209ENST00000532540 PRSS57Q6UWY2 283 aa5.6□□□□□ -1.51
TGFBR3-209ENST00000532540 MIR17HGQ75NE6 70 aa5.6□□□□□ -1.51
TGFBR3-209ENST00000532540 ABHD12Q8N2K0 398 aa5.6□□□□□ -1.51
TGFBR3-209ENST00000532540 NUP35Q8NFH5 326 aa5.6□□□□□ -1.51
TGFBR3-209ENST00000532540 OR1L1Q8NH94 360 aa5.6□□□□□ -1.51
TGFBR3-209ENST00000532540 OR13C6PQ8NH95 151 aa5.6□□□□□ -1.51
TGFBR3-209ENST00000532540 DLX4Q92988 240 aaPredicted RBP5.6□□□□□ -1.51
TGFBR3-209ENST00000532540 SGK494Q96LW2 274 aa5.6□□□□□ -1.51
TGFBR3-209ENST00000532540 RPP21Q9H633 154 aaKnown RBP5.6□□□□□ -1.51
TGFBR3-209ENST00000532540 TP53TG3Q9ULZ0 132 aa5.6□□□□□ -1.51
TGFBR3-209ENST00000532540 IGKV1-5P01602 117 aa5.59□□□□□ -1.51
TGFBR3-209ENST00000532540 NPPCP23582 126 aa5.59□□□□□ -1.51
TGFBR3-209ENST00000532540 PLGLAQ15195 96 aa5.59□□□□□ -1.51
TGFBR3-209ENST00000532540 RNPS1Q15287 305 aaKnown RBP5.59□□□□□ -1.51
TGFBR3-209ENST00000532540 VWC2Q2TAL6 325 aa5.59□□□□□ -1.51
TGFBR3-209ENST00000532540 C10orf113Q5VZT2 155 aa5.59□□□□□ -1.51
TGFBR3-209ENST00000532540 SFTA2Q6UW10 78 aa5.59□□□□□ -1.51
TGFBR3-209ENST00000532540 OR5AN1Q8NGI8 311 aa5.59□□□□□ -1.51
TGFBR3-209ENST00000532540 CYYR1Q96J86 154 aa5.59□□□□□ -1.51
TGFBR3-209ENST00000532540 C18orf15Q96N68 181 aa5.59□□□□□ -1.51
TGFBR3-209ENST00000532540 IGHV3-43A0A0B4J1X8 118 aa5.59□□□□□ -1.51
TGFBR3-209ENST00000532540 PGPA6NDG6 321 aa5.59□□□□□ -1.51
TGFBR3-209ENST00000532540 IGHV3-43DP0DP04 118 aa5.59□□□□□ -1.51
TGFBR3-209ENST00000532540 CKS2P33552 79 aa5.59□□□□□ -1.51
TGFBR3-209ENST00000532540 RPL30P62888 115 aaKnown RBP5.59□□□□□ -1.51
TGFBR3-209ENST00000532540 ATP5G2Q06055 141 aa5.59□□□□□ -1.51
TGFBR3-209ENST00000532540 WFDC2Q14508 124 aa5.59□□□□□ -1.51
TGFBR3-209ENST00000532540 EFNB3Q15768 340 aa5.59□□□□□ -1.51
TGFBR3-209ENST00000532540 ANXA2RQ3ZCQ2 193 aa5.59□□□□□ -1.51
TGFBR3-209ENST00000532540 HIST2H2BCQ6DN03 193 aa5.59□□□□□ -1.51
TGFBR3-209ENST00000532540 ZNF645Q8N7E2 425 aa5.59□□□□□ -1.51
TGFBR3-209ENST00000532540 A0A1B0GUT8 65 aa5.59□□□□□ -1.52
TGFBR3-209ENST00000532540 C16orf97H3BN30 126 aa5.59□□□□□ -1.52
TGFBR3-209ENST00000532540 PEX7O00628 323 aa5.59□□□□□ -1.52
TGFBR3-209ENST00000532540 AREGP15514 252 aa5.59□□□□□ -1.52
TGFBR3-209ENST00000532540 RPL7P18124 248 aaKnown RBP5.59□□□□□ -1.52
TGFBR3-209ENST00000532540 LYPD6Q86Y78 171 aa5.59□□□□□ -1.52
TGFBR3-209ENST00000532540 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.59□□□□□ -1.52
TGFBR3-209ENST00000532540 PPDPFLQ8WWR9 84 aa5.59□□□□□ -1.52
TGFBR3-209ENST00000532540 IFI27L1Q96BM0 104 aa5.59□□□□□ -1.52
TGFBR3-209ENST00000532540 SCRT2Q9NQ03 307 aa5.59□□□□□ -1.52
TGFBR3-209ENST00000532540 SLC25A10Q9UBX3 287 aaPredicted RBP5.59□□□□□ -1.52
TGFBR3-209ENST00000532540 IGHV1-24A0A0C4DH33 117 aa5.58□□□□□ -1.52
TGFBR3-209ENST00000532540 HOXA3O43365 443 aaPredicted RBP5.58□□□□□ -1.52
TGFBR3-209ENST00000532540 ORM2P19652 201 aa5.58□□□□□ -1.52
TGFBR3-209ENST00000532540 FCGR2BP31994 310 aaPredicted RBP5.58□□□□□ -1.52
TGFBR3-209ENST00000532540 ZNF138P52744 262 aa5.58□□□□□ -1.52
TGFBR3-209ENST00000532540 ZNF585BQ52M93 769 aa5.58□□□□□ -1.52
TGFBR3-209ENST00000532540 FAM27BQ5VT28 67 aa5.58□□□□□ -1.52
TGFBR3-209ENST00000532540 MDP1Q86V88 176 aa5.58□□□□□ -1.52
TGFBR3-209ENST00000532540 FADS6Q8N9I5 356 aa5.58□□□□□ -1.52
TGFBR3-209ENST00000532540 TMEM160Q9NX00 188 aa5.58□□□□□ -1.52
TGFBR3-209ENST00000532540 ARHGAP21Q5T5U3 1957 aa5.58□□□□□ -1.52
TGFBR3-209ENST00000532540 IGSF10Q6WRI0 2623 aa5.58□□□□□ -1.52
TGFBR3-209ENST00000532540 A0A1W2PRD5 423 aa5.58□□□□□ -1.52
TGFBR3-209ENST00000532540 A0A1W2PRF3 423 aa5.58□□□□□ -1.52
TGFBR3-209ENST00000532540 A0A1W2PRM7 423 aa5.58□□□□□ -1.52
TGFBR3-209ENST00000532540 HBDP02042 147 aa5.58□□□□□ -1.52
TGFBR3-209ENST00000532540 GRNP28799 593 aaKnown RBP5.58□□□□□ -1.52
TGFBR3-209ENST00000532540 NEGR1Q7Z3B1 354 aa5.58□□□□□ -1.52
TGFBR3-209ENST00000532540 SPATA12Q7Z6I5 190 aa5.58□□□□□ -1.52
TGFBR3-209ENST00000532540 ZNF502Q8TBZ5 544 aa5.58□□□□□ -1.52
TGFBR3-209ENST00000532540 SRSF12Q8WXF0 261 aaKnown RBP5.58□□□□□ -1.52
TGFBR3-209ENST00000532540 LYZL4Q96KX0 146 aa5.58□□□□□ -1.52
TGFBR3-209ENST00000532540 ZNF488Q96MN9 340 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms