RNA–Protein interactions for RNA: ENST00000532285.1

CAPN1-222, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-222ENST00000532285 TENM2Q9NT68 2774 aa16.86■□□□□ 0.29
CAPN1-222ENST00000532285 CCNKO75909 580 aa16.86■□□□□ 0.29
CAPN1-222ENST00000532285 S100A7P31151 101 aa16.86■□□□□ 0.29
CAPN1-222ENST00000532285 PSMG4Q5JS54 123 aa16.86■□□□□ 0.29
CAPN1-222ENST00000532285 NPVFQ9HCQ7 196 aa16.86■□□□□ 0.29
CAPN1-222ENST00000532285 L7N2F9 121 aa16.85■□□□□ 0.29
CAPN1-222ENST00000532285 CA1P00915 261 aaPredicted RBP16.85■□□□□ 0.29
CAPN1-222ENST00000532285 GATA2P23769 480 aaPredicted RBP16.85■□□□□ 0.29
CAPN1-222ENST00000532285 RRAS2P62070 204 aaPredicted RBP16.85■□□□□ 0.29
CAPN1-222ENST00000532285 VAMP2P63027 116 aa16.85■□□□□ 0.29
CAPN1-222ENST00000532285 IFITM3Q01628 133 aa16.85■□□□□ 0.29
CAPN1-222ENST00000532285 GSG1LQ6UXU4 331 aa16.85■□□□□ 0.29
CAPN1-222ENST00000532285 TMEM182Q6ZP80 229 aaPredicted RBP16.85■□□□□ 0.29
CAPN1-222ENST00000532285 CYP2G1PQ6ZSU1 146 aa16.85■□□□□ 0.29
CAPN1-222ENST00000532285 TRPT1Q86TN4 253 aaKnown RBP16.85■□□□□ 0.29
CAPN1-222ENST00000532285 OR8I2Q8N0Y5 310 aa16.85■□□□□ 0.29
CAPN1-222ENST00000532285 MGAT4CQ9UBM8 478 aa16.85■□□□□ 0.29
CAPN1-222ENST00000532285 LSM5Q9Y4Y9 91 aaKnown RBP16.85■□□□□ 0.29
CAPN1-222ENST00000532285 A0A0J9YWU9 116 aa16.84■□□□□ 0.29
CAPN1-222ENST00000532285 KNCNA6PVL3 124 aa16.84■□□□□ 0.29
CAPN1-222ENST00000532285 K7EPK0 472 aa16.84■□□□□ 0.29
CAPN1-222ENST00000532285 ORM2P19652 201 aa16.84■□□□□ 0.29
CAPN1-222ENST00000532285 ACTL10Q5JWF8 245 aa16.84■□□□□ 0.29
CAPN1-222ENST00000532285 GPN1Q9HCN4 374 aaPredicted RBP16.84■□□□□ 0.29
CAPN1-222ENST00000532285 SPP1P10451 314 aa16.83■□□□□ 0.28
CAPN1-222ENST00000532285 SELENOTP62341 195 aa16.83■□□□□ 0.28
CAPN1-222ENST00000532285 MORN3Q6PF18 240 aaPredicted RBP16.83■□□□□ 0.28
CAPN1-222ENST00000532285 TMEM147Q9BVK8 224 aa16.83■□□□□ 0.28
CAPN1-222ENST00000532285 GGACTQ9BVM4 153 aa16.83■□□□□ 0.28
CAPN1-222ENST00000532285 ZNF98A6NK75 572 aa16.82■□□□□ 0.28
CAPN1-222ENST00000532285 ID1P41134 155 aa16.82■□□□□ 0.28
CAPN1-222ENST00000532285 TMEM41BQ5BJD5 291 aa16.82■□□□□ 0.28
CAPN1-222ENST00000532285 TEPPQ6URK8 271 aa16.82■□□□□ 0.28
CAPN1-222ENST00000532285 OR1B1Q8NGR6 318 aa16.82■□□□□ 0.28
CAPN1-222ENST00000532285 RARRES2Q99969 163 aa16.82■□□□□ 0.28
CAPN1-222ENST00000532285 DEDDO75618 318 aa16.81■□□□□ 0.28
CAPN1-222ENST00000532285 PVALBP20472 110 aaPredicted RBP16.81■□□□□ 0.28
CAPN1-222ENST00000532285 GALR1P47211 349 aa16.81■□□□□ 0.28
CAPN1-222ENST00000532285 ARL16Q0P5N6 197 aa16.81■□□□□ 0.28
CAPN1-222ENST00000532285 NRARPQ7Z6K4 114 aa16.81■□□□□ 0.28
CAPN1-222ENST00000532285 SLC25A22Q9H936 323 aa16.81■□□□□ 0.28
CAPN1-222ENST00000532285 STARD9Q9P2P6 4700 aa16.81■□□□□ 0.28
CAPN1-222ENST00000532285 ATF4P18848 351 aaPredicted RBP16.8■□□□□ 0.28
CAPN1-222ENST00000532285 PSMB3P49720 205 aa16.8■□□□□ 0.28
CAPN1-222ENST00000532285 BCAP31P51572 246 aa16.8■□□□□ 0.28
CAPN1-222ENST00000532285 DEFA1P59665 94 aa16.8■□□□□ 0.28
CAPN1-222ENST00000532285 DEFA3P59666 94 aa16.8■□□□□ 0.28
CAPN1-222ENST00000532285 IL15RAQ13261 267 aa16.8■□□□□ 0.28
CAPN1-222ENST00000532285 SAMD13Q5VXD3 122 aa16.8■□□□□ 0.28
CAPN1-222ENST00000532285 TMEM217Q8N7C4 229 aa16.8■□□□□ 0.28
CAPN1-222ENST00000532285 OR11H2Q8NH07 326 aa16.8■□□□□ 0.28
CAPN1-222ENST00000532285 GPR82Q96P67 336 aa16.8■□□□□ 0.28
CAPN1-222ENST00000532285 C11orf1Q9H5F2 150 aa16.8■□□□□ 0.28
CAPN1-222ENST00000532285 PRAF2O60831 178 aa16.79■□□□□ 0.28
CAPN1-222ENST00000532285 HYPMO75409 117 aa16.79■□□□□ 0.28
CAPN1-222ENST00000532285 GIG44P09565 113 aaPredicted RBP16.79■□□□□ 0.28
CAPN1-222ENST00000532285 LINC00869P0C866 280 aa16.79■□□□□ 0.28
CAPN1-222ENST00000532285 MEOX2P50222 304 aa16.79■□□□□ 0.28
CAPN1-222ENST00000532285 CAV2P51636 162 aa16.79■□□□□ 0.28
CAPN1-222ENST00000532285 PLP1P60201 277 aa16.79■□□□□ 0.28
CAPN1-222ENST00000532285 RAP2BP61225 183 aa16.79■□□□□ 0.28
CAPN1-222ENST00000532285 SLC25A32Q9H2D1 315 aa16.79■□□□□ 0.28
CAPN1-222ENST00000532285 HIGD1AQ9Y241 93 aa16.79■□□□□ 0.28
CAPN1-222ENST00000532285 INMT-MINDY4F8WBC2 141 aa16.78■□□□□ 0.28
CAPN1-222ENST00000532285 SOCS3O14543 225 aa16.78■□□□□ 0.28
CAPN1-222ENST00000532285 S100A10P60903 97 aa16.78■□□□□ 0.28
CAPN1-222ENST00000532285 RAB32Q13637 225 aa16.78■□□□□ 0.28
CAPN1-222ENST00000532285 S100A7AQ86SG5 101 aa16.78■□□□□ 0.28
CAPN1-222ENST00000532285 LINC00052Q96N35 136 aa16.78■□□□□ 0.28
CAPN1-222ENST00000532285 DOK5Q9P104 306 aa16.78■□□□□ 0.28
CAPN1-222ENST00000532285 H3BMM0 161 aa16.77■□□□□ 0.28
CAPN1-222ENST00000532285 ISLRO14498 428 aa16.77■□□□□ 0.28
CAPN1-222ENST00000532285 NUTF2P61970 127 aaKnown RBP16.77■□□□□ 0.28
CAPN1-222ENST00000532285 SLC38A11Q08AI6 406 aa16.77■□□□□ 0.28
CAPN1-222ENST00000532285 RSG1Q9BU20 258 aa16.77■□□□□ 0.28
CAPN1-222ENST00000532285 SLC25A39Q9BZJ4 359 aaPredicted RBP16.77■□□□□ 0.28
CAPN1-222ENST00000532285 FAM24AA6NFZ4 105 aa16.76■□□□□ 0.27
CAPN1-222ENST00000532285 H3BRN7 92 aa16.76■□□□□ 0.27
CAPN1-222ENST00000532285 GOSR2O14653 212 aa16.76■□□□□ 0.27
CAPN1-222ENST00000532285 CST7O76096 145 aa16.76■□□□□ 0.27
CAPN1-222ENST00000532285 OR5G3P0C626 314 aa16.76■□□□□ 0.27
CAPN1-222ENST00000532285 HLA-DRB4P13762 266 aa16.76■□□□□ 0.27
CAPN1-222ENST00000532285 C4BPBP20851 252 aa16.76■□□□□ 0.27
CAPN1-222ENST00000532285 EWSR1Q01844 656 aaKnown RBP eCLIP16.76■□□□□ 0.27
CAPN1-222ENST00000532285 PXDC1Q5TGL8 231 aa16.76■□□□□ 0.27
CAPN1-222ENST00000532285 ZNF546Q86UE3 836 aa16.76■□□□□ 0.27
CAPN1-222ENST00000532285 MARVELD1Q9BSK0 173 aa16.76■□□□□ 0.27
CAPN1-222ENST00000532285 SHANK2-AS3Q9BTD1 123 aa16.76■□□□□ 0.27
CAPN1-222ENST00000532285 SCRT1Q9BWW7 348 aa16.76■□□□□ 0.27
CAPN1-222ENST00000532285 LYRM2Q9NU23 88 aaPredicted RBP16.76■□□□□ 0.27
CAPN1-222ENST00000532285 HLA-DRB4X5D2U9 266 aa16.76■□□□□ 0.27
CAPN1-222ENST00000532285 DYNC2H1Q8NCM8 4307 aaKnown RBP16.76■□□□□ 0.27
CAPN1-222ENST00000532285 AGPAT2O15120 278 aa16.75■□□□□ 0.27
CAPN1-222ENST00000532285 C16orf92Q96LL3 132 aa16.75■□□□□ 0.27
CAPN1-222ENST00000532285 ARL6Q9H0F7 186 aa16.75■□□□□ 0.27
CAPN1-222ENST00000532285 SULT1A1P50225 295 aa16.74■□□□□ 0.27
CAPN1-222ENST00000532285 FOXI2Q6ZQN5 318 aa16.74■□□□□ 0.27
CAPN1-222ENST00000532285 C1QTNF4Q9BXJ3 329 aa16.74■□□□□ 0.27
CAPN1-222ENST00000532285 C11orf68Q9H3H3 251 aaKnown RBP16.74■□□□□ 0.27
CAPN1-222ENST00000532285 SAV1Q9H4B6 383 aaPredicted RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms